RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 LMCD1Q9NZU5 365 aa27.42■■□□□ 1.98
TMEM55B-202ENST00000398020 TNNC2P02585 160 aa27.41■■□□□ 1.98
TMEM55B-202ENST00000398020 FAM171A1Q5VUB5 890 aa27.41■■□□□ 1.98
TMEM55B-202ENST00000398020 SASS6Q6UVJ0 657 aa27.41■■□□□ 1.98
TMEM55B-202ENST00000398020 CEP57Q86XR8 500 aa27.41■■□□□ 1.98
TMEM55B-202ENST00000398020 CSGALNACT2Q8N6G5 542 aa27.41■■□□□ 1.98
TMEM55B-202ENST00000398020 PPM1EQ8WY54 764 aa27.41■■□□□ 1.98
TMEM55B-202ENST00000398020 RWDD2AQ9UIY3 292 aa27.41■■□□□ 1.98
TMEM55B-202ENST00000398020 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.41■■□□□ 1.98
TMEM55B-202ENST00000398020 ANO9A1A5B4 782 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 HIDE1A8MVS5 230 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 PIRO00625 290 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 FSCN2O14926 492 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 KRT19P08727 400 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 POLR2BP30876 1174 aaKnown RBP27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 ADGRD2Q7Z7M1 963 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 HERC2P3Q9BVR0 1158 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 MAPK13O15264 365 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 CXCL14O95715 111 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 TRIM49P0CI25 452 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 TRIM49CP0CI26 452 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 CTSAP10619 480 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 EPB41P11171 864 aaKnown RBP27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 VAMP7P51809 220 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 NFKBIBQ15653 356 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 TIGD5Q53EQ6 642 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 KIAA1841Q6NSI8 718 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 INTS8Q75QN2 995 aaKnown RBP27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 RBM23Q86U06 439 aaKnown RBP27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 CXorf38Q8TB03 319 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 SIX4Q9UIU6 781 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 AGAP1Q9UPQ3 857 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 SCN1AP35498 2009 aa27.4■■□□□ 1.98
TMEM55B-202ENST00000398020 SPTLC1O15269 473 aa27.39■■□□□ 1.97
TMEM55B-202ENST00000398020 KRT13P13646 458 aa27.39■■□□□ 1.97
TMEM55B-202ENST00000398020 BFSP1Q12934 665 aa27.39■■□□□ 1.97
TMEM55B-202ENST00000398020 USP41Q3LFD5 358 aa27.39■■□□□ 1.97
TMEM55B-202ENST00000398020 RTP2Q5QGT7 225 aa27.39■■□□□ 1.97
TMEM55B-202ENST00000398020 C1orf220Q5T0J3 134 aa27.39■■□□□ 1.97
TMEM55B-202ENST00000398020 TRAPPC11Q7Z392 1133 aa27.39■■□□□ 1.97
TMEM55B-202ENST00000398020 MKNK1Q9BUB5 465 aa27.39■■□□□ 1.97
TMEM55B-202ENST00000398020 NGRNQ9NPE2 291 aaKnown RBP27.39■■□□□ 1.97
TMEM55B-202ENST00000398020 ITGA11Q9UKX5 1188 aa27.39■■□□□ 1.97
TMEM55B-202ENST00000398020 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.38■■□□□ 1.97
TMEM55B-202ENST00000398020 TRAPPC3O43617 180 aa27.38■■□□□ 1.97
TMEM55B-202ENST00000398020 URODP06132 367 aa27.38■■□□□ 1.97
TMEM55B-202ENST00000398020 GLUD2P49448 558 aa27.38■■□□□ 1.97
TMEM55B-202ENST00000398020 LILRA4P59901 499 aa27.38■■□□□ 1.97
TMEM55B-202ENST00000398020 SMC1AQ14683 1233 aaKnown RBP27.38■■□□□ 1.97
TMEM55B-202ENST00000398020 TCEAL5Q5H9L2 206 aa27.38■■□□□ 1.97
TMEM55B-202ENST00000398020 TMC2Q8TDI7 906 aa27.38■■□□□ 1.97
TMEM55B-202ENST00000398020 BORCS6Q96GS4 357 aa27.38■■□□□ 1.97
TMEM55B-202ENST00000398020 SRRTQ9BXP5 876 aaKnown RBP27.38■■□□□ 1.97
TMEM55B-202ENST00000398020 NSUN3Q9H649 340 aaKnown RBP27.38■■□□□ 1.97
TMEM55B-202ENST00000398020 CHST7Q9NS84 486 aa27.38■■□□□ 1.97
TMEM55B-202ENST00000398020 STK39Q9UEW8 545 aa27.38■■□□□ 1.97
TMEM55B-202ENST00000398020 DACH1Q9UI36 760 aa27.38■■□□□ 1.97
TMEM55B-202ENST00000398020 XIRP2A4UGR9 3374 aa27.38■■□□□ 1.97
TMEM55B-202ENST00000398020 VWA8A3KMH1 1905 aa27.38■■□□□ 1.97
TMEM55B-202ENST00000398020 PER2O15055 1255 aa27.37■■□□□ 1.97
TMEM55B-202ENST00000398020 SLC16A3O15427 465 aaKnown RBP27.37■■□□□ 1.97
TMEM55B-202ENST00000398020 TKTP29401 623 aaKnown RBP27.37■■□□□ 1.97
TMEM55B-202ENST00000398020 CLDN10P78369 228 aa27.37■■□□□ 1.97
TMEM55B-202ENST00000398020 ELAVL2Q12926 359 aaKnown RBP27.37■■□□□ 1.97
TMEM55B-202ENST00000398020 PTPN14Q15678 1187 aa27.37■■□□□ 1.97
TMEM55B-202ENST00000398020 MRPL43Q8N983 215 aaKnown RBP27.37■■□□□ 1.97
TMEM55B-202ENST00000398020 CEP63Q96MT8 703 aa27.37■■□□□ 1.97
TMEM55B-202ENST00000398020 TTPALQ9BTX7 342 aa27.37■■□□□ 1.97
TMEM55B-202ENST00000398020 MMRN2Q9H8L6 949 aa27.37■■□□□ 1.97
TMEM55B-202ENST00000398020 MRPL17Q9NRX2 175 aaKnown RBP27.37■■□□□ 1.97
TMEM55B-202ENST00000398020 C2orf71A6NGG8 1288 aa27.36■■□□□ 1.97
TMEM55B-202ENST00000398020 GTF2F1P35269 517 aaKnown RBP eCLIP27.36■■□□□ 1.97
TMEM55B-202ENST00000398020 PDE12Q6L8Q7 609 aaKnown RBP27.36■■□□□ 1.97
TMEM55B-202ENST00000398020 FOXR2Q6PJQ5 311 aa27.36■■□□□ 1.97
TMEM55B-202ENST00000398020 RIN2Q8WYP3 895 aaPredicted RBP27.36■■□□□ 1.97
TMEM55B-202ENST00000398020 STXBP5LQ9Y2K9 1186 aa27.36■■□□□ 1.97
TMEM55B-202ENST00000398020 RBP5P82980 135 aa27.36■■□□□ 1.97
TMEM55B-202ENST00000398020 DSG1Q02413 1049 aa27.36■■□□□ 1.97
TMEM55B-202ENST00000398020 BIRC3Q13489 604 aa27.36■■□□□ 1.97
TMEM55B-202ENST00000398020 BMS1Q14692 1282 aaKnown RBP27.36■■□□□ 1.97
TMEM55B-202ENST00000398020 KIAA0319Q5VV43 1072 aa27.36■■□□□ 1.97
TMEM55B-202ENST00000398020 TDRD10Q5VZ19 366 aaKnown RBP27.36■■□□□ 1.97
TMEM55B-202ENST00000398020 PRSS55Q6UWB4 352 aaPredicted RBP27.36■■□□□ 1.97
TMEM55B-202ENST00000398020 DSTYKQ6XUX3 929 aa27.36■■□□□ 1.97
TMEM55B-202ENST00000398020 C11orf57Q6ZUT1 292 aaPredicted RBP27.36■■□□□ 1.97
TMEM55B-202ENST00000398020 SUSD3Q96L08 255 aa27.36■■□□□ 1.97
TMEM55B-202ENST00000398020 CST3P01034 146 aaPredicted RBP27.35■■□□□ 1.97
TMEM55B-202ENST00000398020 FGFR3P22607 806 aa27.35■■□□□ 1.97
TMEM55B-202ENST00000398020 NRIP1P48552 1158 aa27.35■■□□□ 1.97
TMEM55B-202ENST00000398020 TAF6P49848 677 aa27.35■■□□□ 1.97
TMEM55B-202ENST00000398020 STX1AQ16623 288 aa27.35■■□□□ 1.97
TMEM55B-202ENST00000398020 SKOR2Q2VWA4 1001 aaPredicted RBP27.35■■□□□ 1.97
TMEM55B-202ENST00000398020 CCDC40Q4G0X9 1142 aa27.35■■□□□ 1.97
TMEM55B-202ENST00000398020 DCAF17Q5H9S7 520 aaPredicted RBP27.35■■□□□ 1.97
TMEM55B-202ENST00000398020 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.35■■□□□ 1.97
TMEM55B-202ENST00000398020 FILIP1Q7Z7B0 1213 aa27.35■■□□□ 1.97
TMEM55B-202ENST00000398020 USP37Q86T82 979 aa27.35■■□□□ 1.97
TMEM55B-202ENST00000398020 IGFLR1Q9H665 355 aa27.35■■□□□ 1.97
TMEM55B-202ENST00000398020 ANO10Q9NW15 660 aa27.35■■□□□ 1.97
TMEM55B-202ENST00000398020 ARMCX3Q9UH62 379 aaPredicted RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms