RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SOWAHBA6NEL2 793 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 DPYSL4O14531 572 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 DUSP11O75319 330 aaKnown RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 C4BPAP04003 597 aaKnown RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 TXNP10599 105 aaKnown RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 ACO1P21399 889 aaKnown RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 NCOA4Q13772 614 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 BTG3Q14201 252 aaPredicted RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 LRRC49Q8IUZ0 686 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 MMP19Q99542 508 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 PAGR1Q9BTK6 254 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 CALCOCO1Q9P1Z2 691 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 RIPK3Q9Y572 518 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 ERI2A8K979 691 aaKnown RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 DTNBO60941 627 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 RGS2P41220 211 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 CAPSQ13938 189 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 SMC1AQ14683 1233 aaKnown RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 MAPRE1Q15691 268 aaKnown RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 ILDR2Q71H61 639 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 RNPC3Q96LT9 517 aaKnown RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 FGD4Q96M96 766 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 RUFY1Q96T51 708 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 ACO2Q99798 780 aaKnown RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 KATNBL1Q9H079 304 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 IP6K2Q9UHH9 426 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 CYP2J2P51589 502 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 DNAJC3Q13217 504 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 CBWD6Q4V339 395 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 CBWD3Q5JTY5 395 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 CBWD5Q5RIA9 395 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 ARMCX2Q7L311 632 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 YTHDF3Q7Z739 585 aaKnown RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 C17orf53Q8N3J3 647 aaPredicted RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 TAS1R2Q8TE23 839 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 HAUS1Q96CS2 278 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 ANKRD36BP1Q96IX9 119 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 PLIN2Q99541 437 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 ARID3AQ99856 593 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 FERMT1Q9BQL6 677 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 PABPC3Q9H361 631 aaKnown RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 CCDC134Q9H6E4 229 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 SSU72Q9NP77 194 aaKnown RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 SEPT9Q9UHD8 586 aaPredicted RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 SHOX2O60902 331 aaPredicted RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 CPT1AP50416 773 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 CLEC16AQ2KHT3 1053 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 JAMLQ86YT9 394 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 CBWD2Q8IUF1 395 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 PPM1KQ8N3J5 372 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 DDX1Q92499 740 aaKnown RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 APBA2Q99767 749 aa6.25□□□□□ -1.41
PTPRD-206ENST00000397617 UPF3AQ9H1J1 476 aaKnown RBP6.25□□□□□ -1.41
PTPRD-206ENST00000397617 BUB1BO60566 1050 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 PPFIA2O75334 1257 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 MAGEA6P43360 314 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 INTS6LQ5JSJ4 861 aaKnown RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 NOTUMQ6P988 496 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 LCLAT1Q6UWP7 414 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 ANKS1BQ7Z6G8 1248 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 SLC13A5Q86YT5 568 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 SCG3Q8WXD2 468 aaKnown RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 C19orf43Q9BQ61 176 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 CTTNBP2NLQ9P2B4 639 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 GOLGA6BA6NDN3 693 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 STK10O94804 968 aaKnown RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 HLA-DRAP01903 254 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 GSTA2P09210 222 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 VDRP11473 427 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 ZFXP17010 805 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 SLC8A3P57103 927 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 MAP2K5Q13163 448 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 SPDYAQ5MJ70 313 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 TMEM86AQ8N2M4 240 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 GBP7Q8N8V2 638 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 ZKSCAN4Q969J2 545 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 BTBD7Q9P203 1132 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 ANK1P16157 1881 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 PRKCBP05771 671 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 TNNT3P45378 269 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 FMO1Q01740 532 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 RASSF7Q02833 373 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 SLC27A1Q6PCB7 646 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 ALKBH8Q96BT7 664 aaKnown RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 GCOM2Q9BZD3 368 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 WRAP73Q9P2S5 460 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 CHMP2AO43633 222 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 NPTXRO95502 500 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 RPL9P32969 192 aaKnown RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 PTPN9P43378 593 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 NOMO3P69849 1222 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 MKRN3Q13064 507 aaKnown RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 LCA5Q86VQ0 697 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 MCOLN2Q8IZK6 566 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 ATL2Q8NHH9 583 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 FHDC1Q9C0D6 1143 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 LRRIQ4A6NIV6 560 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 NCAM2O15394 837 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms