RNA–Protein interactions for RNA: ENST00000397495.8

PPM1F-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2 BASIC

Gene PPM1F, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-202ENST00000397495 ZNF333Q96JL9 665 aa16.51■□□□□ 0.23
PPM1F-202ENST00000397495 PDE11AQ9HCR9 933 aa16.51■□□□□ 0.23
PPM1F-202ENST00000397495 ABCB6Q9NP58 842 aa16.51■□□□□ 0.23
PPM1F-202ENST00000397495 NCANO14594 1321 aa16.51■□□□□ 0.23
PPM1F-202ENST00000397495 A0A1B0GUA9 196 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 ARVCFO00192 962 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 FOXN3O00409 490 aaPredicted RBP16.5■□□□□ 0.23
PPM1F-202ENST00000397495 B4GALT4O60513 344 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 CHRNA1P02708 482 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 TMEM253P0C7T8 217 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 PAFAH1B1P43034 410 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 MXI1P50539 228 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 PSMD6Q15008 389 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 CFAP221Q4G0U5 840 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 GLE1Q53GS7 698 aaKnown RBP16.5■□□□□ 0.23
PPM1F-202ENST00000397495 LMBRD2Q68DH5 695 aaPredicted RBP16.5■□□□□ 0.23
PPM1F-202ENST00000397495 KRT39Q6A163 491 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 HDXQ7Z353 690 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 SLC43A3Q8NBI5 491 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 TPCN2Q8NHX9 752 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 CAGE1Q8TC20 777 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 DHX38Q92620 1227 aaKnown RBP16.5■□□□□ 0.23
PPM1F-202ENST00000397495 FAM212AQ96EL1 285 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 FAM84AQ96KN4 292 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 FNBP1Q96RU3 617 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 ARID3AQ99856 593 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 ADPGKQ9BRR6 497 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 TMEM8AQ9HCN3 771 aa16.5■□□□□ 0.23
PPM1F-202ENST00000397495 CPSF3Q9UKF6 684 aaKnown RBP16.5■□□□□ 0.23
PPM1F-202ENST00000397495 NOC2LQ9Y3T9 749 aaKnown RBP16.5■□□□□ 0.23
PPM1F-202ENST00000397495 MCF2P10911 925 aa16.49■□□□□ 0.23
PPM1F-202ENST00000397495 HADHBP55084 474 aaKnown RBP16.49■□□□□ 0.23
PPM1F-202ENST00000397495 PCBP1Q15365 356 aaKnown RBP eCLIP16.49■□□□□ 0.234e-6■■■□□ 14.8
PPM1F-202ENST00000397495 ENOX2Q16206 610 aaKnown RBP16.49■□□□□ 0.23
PPM1F-202ENST00000397495 RPAINQ86UA6 219 aa16.49■□□□□ 0.23
PPM1F-202ENST00000397495 TMEM192Q8IY95 271 aa16.49■□□□□ 0.23
PPM1F-202ENST00000397495 SENP6Q9GZR1 1112 aaPredicted RBP16.49■□□□□ 0.23
PPM1F-202ENST00000397495 PIN4Q9Y237 131 aaKnown RBP16.49■□□□□ 0.23
PPM1F-202ENST00000397495 STXBP5LQ9Y2K9 1186 aa16.49■□□□□ 0.23
PPM1F-202ENST00000397495 NCK2O43639 380 aa16.49■□□□□ 0.23
PPM1F-202ENST00000397495 NPTXRO95502 500 aa16.49■□□□□ 0.23
PPM1F-202ENST00000397495 RPLP2P05387 115 aaKnown RBP16.49■□□□□ 0.23
PPM1F-202ENST00000397495 ANK1P16157 1881 aa16.49■□□□□ 0.23
PPM1F-202ENST00000397495 TNNI1P19237 187 aa16.49■□□□□ 0.23
PPM1F-202ENST00000397495 GALCP54803 685 aa16.49■□□□□ 0.23
PPM1F-202ENST00000397495 NAP1L1P55209 391 aaKnown RBP16.49■□□□□ 0.23
PPM1F-202ENST00000397495 MGAT3Q09327 533 aa16.49■□□□□ 0.23
PPM1F-202ENST00000397495 NOTUMQ6P988 496 aa16.49■□□□□ 0.23
PPM1F-202ENST00000397495 FAM228AQ86W67 206 aa16.49■□□□□ 0.23
PPM1F-202ENST00000397495 BRSK2Q8IWQ3 736 aa16.49■□□□□ 0.23
PPM1F-202ENST00000397495 FAM71AQ8IYT1 594 aa16.49■□□□□ 0.23
PPM1F-202ENST00000397495 U2AF1L4Q8WU68 220 aaKnown RBP16.49■□□□□ 0.23
PPM1F-202ENST00000397495 PBKQ96KB5 322 aa16.49■□□□□ 0.23
PPM1F-202ENST00000397495 UBE2TQ9NPD8 197 aaPredicted RBP16.49■□□□□ 0.23
PPM1F-202ENST00000397495 PTPRJQ12913 1337 aa16.48■□□□□ 0.23
PPM1F-202ENST00000397495 KIF4AO95239 1232 aa16.48■□□□□ 0.23
PPM1F-202ENST00000397495 SGPL1O95470 568 aa16.48■□□□□ 0.23
PPM1F-202ENST00000397495 STAG3L1P0CL83 205 aa16.48■□□□□ 0.23
PPM1F-202ENST00000397495 TRIM71Q2Q1W2 868 aaKnown RBP16.48■□□□□ 0.23
PPM1F-202ENST00000397495 CCDC70Q6NSX1 233 aa16.48■□□□□ 0.23
PPM1F-202ENST00000397495 SLC27A1Q6PCB7 646 aa16.48■□□□□ 0.23
PPM1F-202ENST00000397495 CCNI2Q6ZMN8 369 aaPredicted RBP16.48■□□□□ 0.23
PPM1F-202ENST00000397495 C15orf39Q6ZRI6 1047 aa16.48■□□□□ 0.23
PPM1F-202ENST00000397495 ARHGEF19Q8IW93 802 aa16.48■□□□□ 0.23
PPM1F-202ENST00000397495 SYCE1Q8N0S2 351 aa16.48■□□□□ 0.23
PPM1F-202ENST00000397495 SHC3Q92529 594 aa16.48■□□□□ 0.23
PPM1F-202ENST00000397495 ZNF516Q92618 1163 aa16.48■□□□□ 0.23
PPM1F-202ENST00000397495 FAM81BQ96LP2 452 aa16.48■□□□□ 0.23
PPM1F-202ENST00000397495 AGPAT1Q99943 283 aa16.48■□□□□ 0.23
PPM1F-202ENST00000397495 EIF2AQ9BY44 585 aaKnown RBP16.48■□□□□ 0.23
PPM1F-202ENST00000397495 ISCUQ9H1K1 167 aa16.48■□□□□ 0.23
PPM1F-202ENST00000397495 VIPAS39Q9H9C1 493 aa16.48■□□□□ 0.23
PPM1F-202ENST00000397495 ANKRD62A6NC57 917 aa16.47■□□□□ 0.23
PPM1F-202ENST00000397495 ZC3H11AO75152 810 aaKnown RBP eCLIP16.47■□□□□ 0.23
PPM1F-202ENST00000397495 RPS6KA5O75582 802 aa16.47■□□□□ 0.23
PPM1F-202ENST00000397495 CXCL8P10145 99 aa16.47■□□□□ 0.23
PPM1F-202ENST00000397495 TNFAIP3P21580 790 aa16.47■□□□□ 0.23
PPM1F-202ENST00000397495 TNFRSF8P28908 595 aa16.47■□□□□ 0.23
PPM1F-202ENST00000397495 AXLP30530 894 aa16.47■□□□□ 0.23
PPM1F-202ENST00000397495 NFX1Q12986 1120 aaKnown RBP16.47■□□□□ 0.23
PPM1F-202ENST00000397495 MAP9Q49MG5 647 aa16.47■□□□□ 0.23
PPM1F-202ENST00000397495 ZNF618Q5T7W0 954 aa16.47■□□□□ 0.23
PPM1F-202ENST00000397495 GLYCTKQ8IVS8 523 aa16.47■□□□□ 0.23
PPM1F-202ENST00000397495 RFFLQ8WZ73 363 aa16.47■□□□□ 0.23
PPM1F-202ENST00000397495 ARMC5Q96C12 935 aa16.47■□□□□ 0.23
PPM1F-202ENST00000397495 OSBPL7Q9BZF2 842 aa16.47■□□□□ 0.23
PPM1F-202ENST00000397495 CRISPLD2Q9H0B8 497 aa16.47■□□□□ 0.23
PPM1F-202ENST00000397495 RPF1Q9H9Y2 349 aaKnown RBP16.47■□□□□ 0.23
PPM1F-202ENST00000397495 TMEM59LQ9UK28 342 aa16.47■□□□□ 0.23
PPM1F-202ENST00000397495 CITO14578 2027 aa16.47■□□□□ 0.23
PPM1F-202ENST00000397495 CLTAP09496 248 aa16.46■□□□□ 0.23
PPM1F-202ENST00000397495 GZMAP12544 262 aa16.46■□□□□ 0.23
PPM1F-202ENST00000397495 CDK7P50613 346 aa16.46■□□□□ 0.23
PPM1F-202ENST00000397495 RPS6KA1Q15418 735 aa16.46■□□□□ 0.23
PPM1F-202ENST00000397495 DCAF4L1Q3SXM0 396 aa16.46■□□□□ 0.23
PPM1F-202ENST00000397495 CCDC181Q5TID7 509 aa16.46■□□□□ 0.23
PPM1F-202ENST00000397495 SMYD5Q6GMV2 418 aa16.46■□□□□ 0.23
PPM1F-202ENST00000397495 SV2AQ7L0J3 742 aa16.46■□□□□ 0.23
PPM1F-202ENST00000397495 FBXL13Q8NEE6 735 aa16.46■□□□□ 0.23
PPM1F-202ENST00000397495 HELQQ8TDG4 1101 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms