RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 CHCHD4Q8N4Q1 142 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 TTC8Q8TAM2 541 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 SMARCD2Q92925 531 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 JAKMIP1Q96N16 626 aaKnown RBP10.42□□□□□ -0.74
NEDD9-203ENST00000397378 PAAF1Q9BRP4 392 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 SLKQ9H2G2 1235 aaPredicted RBP10.42□□□□□ -0.74
NEDD9-203ENST00000397378 CCDC86Q9H6F5 360 aaKnown RBP10.42□□□□□ -0.74
NEDD9-203ENST00000397378 ZSWIM4Q9H7M6 989 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 NCOA5Q9HCD5 579 aaKnown RBP10.42□□□□□ -0.74
NEDD9-203ENST00000397378 AVENQ9NQS1 362 aaPredicted RBP10.42□□□□□ -0.74
NEDD9-203ENST00000397378 RGL1Q9NZL6 768 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 KLK14Q9P0G3 267 aa10.42□□□□□ -0.74
NEDD9-203ENST00000397378 CELSR3Q9NYQ7 3312 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 PATE3B3GLJ2 98 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 H0Y626 953 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 ARNTLO00327 626 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 ZNF197O14709 1029 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 ZBTB39O15060 712 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 DCLK1O15075 740 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 KIF4AO95239 1232 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 TRIM16O95361 564 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 DEXIO95424 95 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 NPTXRO95502 500 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 PLA2G2AP14555 144 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 RPS6KB1P23443 525 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 CTHP32929 405 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 ARL2P36404 184 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 CCT2P78371 535 aaKnown RBP10.41□□□□□ -0.74
NEDD9-203ENST00000397378 SSRP1Q08945 709 aaKnown RBP10.41□□□□□ -0.74
NEDD9-203ENST00000397378 CCINQ13939 588 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 KARSQ15046 597 aaKnown RBP10.41□□□□□ -0.74
NEDD9-203ENST00000397378 LARP1BQ659C4 914 aaKnown RBP10.41□□□□□ -0.74
NEDD9-203ENST00000397378 PKN3Q6P5Z2 889 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.41□□□□□ -0.74
NEDD9-203ENST00000397378 RALGPS2Q86X27 583 aaPredicted RBP10.41□□□□□ -0.74
NEDD9-203ENST00000397378 MFSD6LQ8IWD5 586 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 SYNPOQ8N3V7 929 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 ASAP3Q8TDY4 903 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 HAS1Q92839 578 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 ZSWIM3Q96MP5 696 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 PARP2Q9UGN5 583 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 CITO14578 2027 aa10.41□□□□□ -0.74
NEDD9-203ENST00000397378 NCANO14594 1321 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 MYBPHLA2RUH7 354 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 FAM221BA6H8Z2 402 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 CASTOR2A6NHX0 329 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 HEPACAM2A8MVW5 462 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 TMEM189-UBE2V1I3L0A0 370 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 PTGESO14684 152 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 B4GALT5O43286 388 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 DGAT1O75907 488 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 LYPLA2O95372 231 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 THP07101 528 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 FGFR3P22607 806 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 GLRA2P23416 452 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 MAPK8P45983 427 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 IRX4P78413 519 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 SPIRE1Q08AE8 756 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 CTTNQ14247 550 aaKnown RBP10.4□□□□□ -0.74
NEDD9-203ENST00000397378 NAB2Q15742 525 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 PPP4R3CPQ6ZMV5 832 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 NEK8Q86SG6 692 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 ZNF605Q86T29 641 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 CDR2LQ86X02 465 aaPredicted RBP10.4□□□□□ -0.74
NEDD9-203ENST00000397378 ZSCAN18Q8TBC5 510 aaPredicted RBP10.4□□□□□ -0.74
NEDD9-203ENST00000397378 DYDC2Q96IM9 177 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 PRIMPOLQ96LW4 560 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 HHIPQ96QV1 700 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 NAP1L4Q99733 375 aaKnown RBP10.4□□□□□ -0.74
NEDD9-203ENST00000397378 SLITRK6Q9H5Y7 841 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 ANKEF1Q9NU02 776 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 MTRRQ9UBK8 725 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 RAXQ9Y2V3 346 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 SNX14Q9Y5W7 946 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 CDY1Q9Y6F8 540 aa10.4□□□□□ -0.74
NEDD9-203ENST00000397378 KIF26AQ9ULI4 1882 aaPredicted RBP10.4□□□□□ -0.75
NEDD9-203ENST00000397378 CCDC194A0A1B0GVG4 234 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 PRRG1O14668 218 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 CHADO15335 359 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 ATG13O75143 517 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 SLITRK3O94933 977 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 ELF1P32519 619 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 HSPA4P34932 840 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 CCR2P41597 374 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 CYP4A11Q02928 519 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 FAM187BQ17R55 369 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 CYP4A22Q5TCH4 519 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 NCAPH2Q6IBW4 605 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 CYP2U1Q7Z449 544 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 TPH2Q8IWU9 490 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 SLFN12Q8IYM2 578 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 MDM1Q8TC05 714 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 UBL7Q96S82 380 aaPredicted RBP10.39□□□□□ -0.75
NEDD9-203ENST00000397378 SCUBE2Q9NQ36 999 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 PRMT7Q9NVM4 692 aaPredicted RBP10.39□□□□□ -0.75
NEDD9-203ENST00000397378 GTSE1Q9NYZ3 720 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 DACH1Q9UI36 760 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 BACE2Q9Y5Z0 518 aa10.39□□□□□ -0.75
NEDD9-203ENST00000397378 ASCC3Q8N3C0 2202 aaKnown RBP10.38□□□□□ -0.75
NEDD9-203ENST00000397378 SHROOM3Q8TF72 1996 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms