RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 THPOP40225 353 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 KCNT1Q5JUK3 1230 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 NOL9Q5SY16 702 aaKnown RBP16.17■□□□□ 0.18
MCF2L-205ENST00000397017 CEP57Q86XR8 500 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 CCDC33Q8N5R6 958 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 HEY1Q9Y5J3 304 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 IKBKGQ9Y6K9 419 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 MYO9BQ13459 2157 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 RAD51CO43502 376 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 HUS1O60921 280 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 RGS2P41220 211 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 ZNF200P98182 395 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-205ENST00000397017 ACOT1Q86TX2 421 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 NME8Q8N427 588 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 ATG4AQ8WYN0 398 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 ANKRD7Q92527 254 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 FAM204AQ9H8W3 233 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 VPS37BQ9H9H4 285 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 MED7O43513 233 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 RPS6KA5O75582 802 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 TMEM253P0C7T8 217 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 CDR2Q01850 454 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 TBK1Q9UHD2 729 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 NFASCO94856 1347 aa16.17■□□□□ 0.18
MCF2L-205ENST00000397017 LACTBL1A8MY62 500 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 ACSL3O95573 720 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 RFX1P22670 979 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 NCKAP1LP55160 1127 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 UMODL1Q5DID0 1318 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 RPTORQ8N122 1335 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 LAMB2P55268 1798 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 GTPBP10A4D1E9 387 aaKnown RBP16.16■□□□□ 0.18
MCF2L-205ENST00000397017 ASAP2O43150 1006 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 MAFO75444 373 aaPredicted RBP16.16■□□□□ 0.18
MCF2L-205ENST00000397017 LYPLA2O95372 231 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 CST3P01034 146 aaPredicted RBP16.16■□□□□ 0.18
MCF2L-205ENST00000397017 CDK17Q00537 523 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 FAM117BQ6P1L5 589 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 CASC4Q6P4E1 433 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 ENOSF1Q7L5Y1 443 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 KREMEN1Q96MU8 473 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 MRPL42Q9Y6G3 142 aaKnown RBP16.16■□□□□ 0.18
MCF2L-205ENST00000397017 ACKR2O00590 384 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 ATP2A1O14983 1001 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 XPOTO43592 962 aaKnown RBP16.16■□□□□ 0.18
MCF2L-205ENST00000397017 RNF40O75150 1001 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 ECEL1O95672 775 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 NFICP08651 508 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 CLTAP09496 248 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 COBLL1Q53SF7 1204 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 ZNF484Q5JVG2 852 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 TMC2Q8TDI7 906 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 EPS8L1Q8TE68 723 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 TRIM11Q96F44 468 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 CGRRF1Q99675 332 aa16.16■□□□□ 0.18
MCF2L-205ENST00000397017 TTLL13PA6NNM8 815 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 ZBTB22O15209 634 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 P4HA2O15460 535 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 KRT3P12035 628 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 ATF2P15336 505 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 ELNP15502 786 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 YY1P25490 414 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 DENND2CQ68D51 928 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 RGMBQ6NW40 437 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 B4GALNT4Q76KP1 1039 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 CWC15Q9P013 229 aaKnown RBP16.15■□□□□ 0.18
MCF2L-205ENST00000397017 EPHB4P54760 987 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 MAP3K10Q02779 954 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 SH3D19Q5HYK7 790 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 JADE1Q6IE81 842 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 CCDC137Q6PK04 289 aaKnown RBP16.15■□□□□ 0.18
MCF2L-205ENST00000397017 TEX2Q8IWB9 1127 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 VTA1Q9NP79 307 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 PPANQ9NQ55 473 aaKnown RBP16.15■□□□□ 0.18
MCF2L-205ENST00000397017 DPP3Q9NY33 737 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 CCDC66A2RUB6 948 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 GGCXP38435 758 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 RBP5P82980 135 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 ANKRD42Q8N9B4 389 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 OR2W6PQ8NHA6 318 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 GTF3C2Q8WUA4 911 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-205ENST00000397017 C18orf8Q96DM3 657 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 FAM81BQ96LP2 452 aa16.15■□□□□ 0.18
MCF2L-205ENST00000397017 KRT10P13645 584 aa16.14■□□□□ 0.18
MCF2L-205ENST00000397017 SCN4BQ8IWT1 228 aa16.14■□□□□ 0.18
MCF2L-205ENST00000397017 PLEKHO2Q8TD55 490 aa16.14■□□□□ 0.18
MCF2L-205ENST00000397017 KRT35Q92764 455 aa16.14■□□□□ 0.18
MCF2L-205ENST00000397017 TRIM7Q9C029 511 aa16.14■□□□□ 0.18
MCF2L-205ENST00000397017 DHX33Q9H6R0 707 aaKnown RBP16.14■□□□□ 0.18
MCF2L-205ENST00000397017 RNF14Q9UBS8 474 aa16.14■□□□□ 0.18
MCF2L-205ENST00000397017 DDX60LQ5H9U9 1706 aaKnown RBP16.14■□□□□ 0.17
MCF2L-205ENST00000397017 PRPSAP2O60256 369 aa16.14■□□□□ 0.17
MCF2L-205ENST00000397017 UPP2O95045 317 aa16.14■□□□□ 0.17
MCF2L-205ENST00000397017 MARCKSL1P49006 195 aa16.14■□□□□ 0.17
MCF2L-205ENST00000397017 ATN1P54259 1190 aaPredicted RBP16.14■□□□□ 0.17
MCF2L-205ENST00000397017 BASP1P80723 227 aaKnown RBP16.14■□□□□ 0.17
MCF2L-205ENST00000397017 ZC3H18Q86VM9 953 aaKnown RBP16.14■□□□□ 0.17
MCF2L-205ENST00000397017 TMEM192Q8IY95 271 aa16.14■□□□□ 0.17
MCF2L-205ENST00000397017 ZNF606Q8WXB4 792 aa16.14■□□□□ 0.17
MCF2L-205ENST00000397017 FMO2Q99518 471 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms