RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 TBX20Q9UMR3 447 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 CBX6O95503 412 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 P4HBP07237 508 aaKnown RBP14.8□□□□□ -0.04
NUP98-204ENST00000397004 ATF2P15336 505 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 MON1BQ7L1V2 547 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 C4orf33Q8N1A6 199 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 ATL2Q8NHH9 583 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 CLEC4DQ8WXI8 215 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 WDR83Q9BRX9 315 aaKnown RBP14.8□□□□□ -0.04
NUP98-204ENST00000397004 MRIQ9BWK5 157 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 PITPNM3Q9BZ71 974 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 NPTX2P47972 431 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 TUBP50607 506 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 CCNG1P51959 295 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 TAS1R3Q7RTX0 852 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 PASD1Q8IV76 773 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 ST6GALNAC4Q9H4F1 302 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 AGO4Q9HCK5 861 aaKnown RBP14.8□□□□□ -0.04
NUP98-204ENST00000397004 PI4K2BG5E9Z4 385 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 ECE2O60344 883 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 CDH16O75309 829 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 NEBLO76041 1014 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 MAPTP10636 758 aaKnown RBP14.8□□□□□ -0.04
NUP98-204ENST00000397004 CETN1Q12798 172 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 P3H1Q32P28 736 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 PCNX4Q63HM2 1172 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 CDCA2Q69YH5 1023 aaPredicted RBP14.8□□□□□ -0.04
NUP98-204ENST00000397004 CAPN12Q6ZSI9 719 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 PODNQ7Z5L7 613 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 RELL1Q8IUW5 271 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 FAM13CQ8NE31 585 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 SUPT20HQ8NEM7 779 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 RBM15Q96T37 977 aaKnown RBP eCLIP14.8□□□□□ -0.045e-7■■□□□ 12.8
NUP98-204ENST00000397004 PAIP2Q9BPZ3 127 aaKnown RBP14.8□□□□□ -0.04
NUP98-204ENST00000397004 FAM167BQ9BTA0 163 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 TMEM8AQ9HCN3 771 aa14.8□□□□□ -0.04
NUP98-204ENST00000397004 ZNF219Q9P2Y4 722 aaPredicted RBP14.8□□□□□ -0.04
NUP98-204ENST00000397004 MAPK13O15264 365 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 MAGEB2O15479 319 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 RXRBP28702 533 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 HSD17B4P51659 736 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 STRIP1Q5VSL9 837 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 ANO5Q75V66 913 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 OGFOD1Q8N543 542 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 FBXL13Q8NEE6 735 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 TTC8Q8TAM2 541 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 MFSD14AQ96MC6 490 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 FBXL18Q96ME1 805 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 CYLDQ9NQC7 956 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 DNPEPQ9ULA0 475 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 PHTF1Q9UMS5 762 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 LOXHD1Q8IVV2 1947 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 KRT5P13647 590 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 MAGEA4P43358 317 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 ZNF252P-AS1Q0IIN9 211 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 PTP4A2Q12974 167 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 EFTUD2Q15029 972 aaKnown RBP eCLIP14.79□□□□□ -0.043e-6■■■■■ 41.9
NUP98-204ENST00000397004 TKFCQ3LXA3 575 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 WDR72Q3MJ13 1102 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 RSRC1Q96IZ7 334 aaKnown RBP14.79□□□□□ -0.04
NUP98-204ENST00000397004 EME2A4GXA9 379 aaPredicted RBP14.79□□□□□ -0.04
NUP98-204ENST00000397004 APBA3O96018 575 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 CYP1A1P04798 512 aaPredicted RBP14.79□□□□□ -0.04
NUP98-204ENST00000397004 CTC1Q2NKJ3 1217 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 NAIF1Q69YI7 327 aaPredicted RBP14.79□□□□□ -0.04
NUP98-204ENST00000397004 GBP7Q8N8V2 638 aaPredicted RBP14.79□□□□□ -0.04
NUP98-204ENST00000397004 CCHCR1Q8TD31 782 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 ACSF2Q96CM8 615 aaPredicted RBP14.79□□□□□ -0.04
NUP98-204ENST00000397004 MAK16Q9BXY0 300 aaKnown RBP14.79□□□□□ -0.04
NUP98-204ENST00000397004 C10orf88Q9H8K7 445 aa14.79□□□□□ -0.04
NUP98-204ENST00000397004 FAM47DPA6NHR8 397 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 TCP10L2B9ZVM9 353 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 NPM3O75607 178 aaKnown RBP14.78□□□□□ -0.04
NUP98-204ENST00000397004 LINGO3P0C6S8 592 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 HMGB2P26583 209 aaKnown RBP14.78□□□□□ -0.04
NUP98-204ENST00000397004 RPL7AP62424 266 aaKnown RBP14.78□□□□□ -0.04
NUP98-204ENST00000397004 MTM1Q13496 603 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 C15orf39Q6ZRI6 1047 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 C10orf82Q8WW14 230 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 MRRFQ96E11 262 aaKnown RBP14.78□□□□□ -0.04
NUP98-204ENST00000397004 PRR11Q96HE9 360 aaPredicted RBP14.78□□□□□ -0.04
NUP98-204ENST00000397004 MIPEPQ99797 713 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 SCAF8Q9UPN6 1271 aaKnown RBP14.78□□□□□ -0.04
NUP98-204ENST00000397004 A0A1B0GUA9 196 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 ATP2A2P16615 1042 aaKnown RBP14.78□□□□□ -0.04
NUP98-204ENST00000397004 QARSP47897 775 aaKnown RBP14.78□□□□□ -0.04
NUP98-204ENST00000397004 YARSP54577 528 aaKnown RBP14.78□□□□□ -0.04
NUP98-204ENST00000397004 CCDC15Q0P6D6 951 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 MAMLD1Q13495 774 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 FAM102BQ5T8I3 360 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 MAP4K3Q8IVH8 894 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 HAPLN2Q9GZV7 340 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 LRMDAQ9H2I8 198 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 KLHL14Q9P2G3 628 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 YDJCA8MPS7 323 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 TYROBPO43914 113 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 PROSCO94903 275 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 ACO1P21399 889 aaKnown RBP14.78□□□□□ -0.04
NUP98-204ENST00000397004 EPHB2P29323 1055 aa14.78□□□□□ -0.04
NUP98-204ENST00000397004 POLGP54098 1239 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms