RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 PRUNE1Q86TP1 453 aa16.7■□□□□ 0.26
HOXA3-202ENST00000396352 SRRM1Q8IYB3 904 aaKnown RBP16.7■□□□□ 0.26
HOXA3-202ENST00000396352 N4BP2L2Q92802 583 aaPredicted RBP16.7■□□□□ 0.26
HOXA3-202ENST00000396352 CNKSR1Q969H4 720 aa16.7■□□□□ 0.26
HOXA3-202ENST00000396352 MAGEB18Q96M61 343 aa16.7■□□□□ 0.26
HOXA3-202ENST00000396352 PDCD2LQ9BRP1 358 aa16.7■□□□□ 0.26
HOXA3-202ENST00000396352 ZNF862O60290 1169 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 STBD1O95210 358 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 GARTP22102 1010 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 DSG3P32926 999 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 CLDN10P78369 228 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 ACCSLQ4AC99 568 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 KATNAL2Q8IYT4 538 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 OGFOD1Q8N543 542 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 ANKLE1Q8NAG6 615 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 C9orf72Q96LT7 481 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 RXFP1Q9HBX9 757 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 PXMP2Q9NR77 195 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 MAP3K20Q9NYL2 800 aaKnown RBP16.69■□□□□ 0.26
HOXA3-202ENST00000396352 IGF2BP3O00425 579 aaKnown RBP eCLIP16.69■□□□□ 0.26
HOXA3-202ENST00000396352 RAD17O75943 681 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 HMGB2P26583 209 aaKnown RBP16.69■□□□□ 0.26
HOXA3-202ENST00000396352 MKRN3Q13064 507 aaKnown RBP16.69■□□□□ 0.26
HOXA3-202ENST00000396352 LMBRD2Q68DH5 695 aaPredicted RBP16.69■□□□□ 0.26
HOXA3-202ENST00000396352 CCDC89Q8N998 374 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 EBF2Q9HAK2 575 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 C17orf75Q9HAS0 396 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 ACTL7BQ9Y614 415 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 WDR46O15213 610 aaKnown RBP16.69■□□□□ 0.26
HOXA3-202ENST00000396352 ACO1P21399 889 aaKnown RBP16.69■□□□□ 0.26
HOXA3-202ENST00000396352 BRDTQ58F21 947 aaPredicted RBP16.69■□□□□ 0.26
HOXA3-202ENST00000396352 ASRGL1Q7L266 308 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 RHOT1Q8IXI2 618 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 RMDN3Q96TC7 470 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 MOV10L1Q9BXT6 1211 aaKnown RBP16.69■□□□□ 0.26
HOXA3-202ENST00000396352 OSBPL8Q9BZF1 889 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 TCEAL9Q9UHQ7 104 aa16.69■□□□□ 0.26
HOXA3-202ENST00000396352 PARP14Q460N5 1801 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 TESPA1A2RU30 521 aaPredicted RBP16.68■□□□□ 0.26
HOXA3-202ENST00000396352 STX2P32856 288 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 MAP3K10Q02779 954 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 ADCY1Q08828 1119 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 MAMLD1Q13495 774 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 FKBP1CQ5VVH2 108 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 ARHGEF18Q6ZSZ5 1173 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 ZNF365Q70YC5 407 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 SUPT20HQ8NEM7 779 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 FLAD1Q8NFF5 587 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 CEP170P1Q96L14 293 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 QTRT2Q9H974 415 aaKnown RBP16.68■□□□□ 0.26
HOXA3-202ENST00000396352 PDLIM7Q9NR12 457 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 ARHGEF3Q9NR81 526 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 ZBTB12Q9Y330 459 aaPredicted RBP16.68■□□□□ 0.26
HOXA3-202ENST00000396352 KRT16P08779 473 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 TAC1P20366 129 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 GCAP28676 217 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 FOXN2P32314 431 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 PTPRJQ12913 1337 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 STAT4Q14765 748 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 MTFR1Q15390 333 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 ZACNQ401N2 412 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 TDRD10Q5VZ19 366 aaKnown RBP16.68■□□□□ 0.26
HOXA3-202ENST00000396352 SPOPLQ6IQ16 392 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 BBOF1Q8ND07 529 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 MAML1Q92585 1016 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 STAMBPL1Q96FJ0 436 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 PLCD4Q9BRC7 762 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 C11orf70Q9BRQ4 267 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 XPNPEP1Q9NQW7 623 aa16.68■□□□□ 0.26
HOXA3-202ENST00000396352 CD58P19256 250 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 NOMO3P69849 1222 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 ZCCHC9Q8N567 271 aaKnown RBP16.67■□□□□ 0.26
HOXA3-202ENST00000396352 AGAP11Q8TF27 550 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 L3MBTL3Q96JM7 780 aaPredicted RBP16.67■□□□□ 0.26
HOXA3-202ENST00000396352 PCDHA10Q9Y5I2 948 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 HLA-DRAP01903 254 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 ABHD2P08910 425 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 FAM83AQ86UY5 434 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 PASD1Q8IV76 773 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 KIF2BQ8N4N8 673 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 EXD1Q8NHP7 514 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 SENP7Q9BQF6 1050 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 GABBR1Q9UBS5 961 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 L3MBTL1Q9Y468 752 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 TELO2Q9Y4R8 837 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 SIP14410 1827 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 VNN1O95497 513 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 C4BPAP04003 597 aaKnown RBP16.67■□□□□ 0.26
HOXA3-202ENST00000396352 WDR4P57081 412 aaKnown RBP16.67■□□□□ 0.26
HOXA3-202ENST00000396352 BPIFB4P59827 614 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 STRN3Q13033 797 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 P3H1Q32P28 736 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 RNF43Q68DV7 783 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 PLEKHA7Q6IQ23 1121 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 MIS18BP1Q6P0N0 1132 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 GLIS1Q8NBF1 620 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 RDM1Q8NG50 284 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 KLHL29Q96CT2 875 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 RBM15Q96T37 977 aaKnown RBP eCLIP16.67■□□□□ 0.26
HOXA3-202ENST00000396352 NKIRAS1Q9NYS0 192 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms