RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 ASCL5Q7RTU5 278 aa17.83■□□□□ 0.44
DDR1-229ENST00000396342 KRI1Q8N9T8 703 aaKnown RBP17.83■□□□□ 0.44
DDR1-229ENST00000396342 BEST2Q8NFU1 509 aa17.83■□□□□ 0.44
DDR1-229ENST00000396342 FAM212AQ96EL1 285 aa17.83■□□□□ 0.44
DDR1-229ENST00000396342 TBC1D32Q96NH3 1257 aa17.83■□□□□ 0.44
DDR1-229ENST00000396342 KIF2CQ99661 725 aa17.83■□□□□ 0.44
DDR1-229ENST00000396342 CXCL16Q9H2A7 254 aa17.83■□□□□ 0.44
DDR1-229ENST00000396342 SLITRK6Q9H5Y7 841 aa17.83■□□□□ 0.44
DDR1-229ENST00000396342 AVENQ9NQS1 362 aaPredicted RBP17.83■□□□□ 0.44
DDR1-229ENST00000396342 ASAH2Q9NR71 780 aa17.83■□□□□ 0.44
DDR1-229ENST00000396342 SPATA6Q9NWH7 488 aaPredicted RBP17.83■□□□□ 0.44
DDR1-229ENST00000396342 HCFC1R1Q9NWW0 138 aa17.83■□□□□ 0.44
DDR1-229ENST00000396342 AFF4Q9UHB7 1163 aaKnown RBP17.83■□□□□ 0.44
DDR1-229ENST00000396342 FBXL5Q9UKA1 691 aa17.83■□□□□ 0.44
DDR1-229ENST00000396342 TDRD15B5MCY1 1934 aaKnown RBP17.82■□□□□ 0.44
DDR1-229ENST00000396342 TULP1O00294 542 aaPredicted RBP17.82■□□□□ 0.44
DDR1-229ENST00000396342 MICAL2O94851 1124 aa17.82■□□□□ 0.44
DDR1-229ENST00000396342 ABLIM3O94929 683 aa17.82■□□□□ 0.44
DDR1-229ENST00000396342 CYP3A5P20815 502 aa17.82■□□□□ 0.44
DDR1-229ENST00000396342 ALDH1A3P47895 512 aa17.82■□□□□ 0.44
DDR1-229ENST00000396342 SOX4Q06945 474 aaPredicted RBP17.82■□□□□ 0.44
DDR1-229ENST00000396342 ADCY1Q08828 1119 aa17.82■□□□□ 0.44
DDR1-229ENST00000396342 MAPK7Q13164 816 aa17.82■□□□□ 0.44
DDR1-229ENST00000396342 IL17AQ16552 155 aa17.82■□□□□ 0.44
DDR1-229ENST00000396342 KCNK18Q7Z418 384 aa17.82■□□□□ 0.44
DDR1-229ENST00000396342 YAF2Q8IY57 180 aa17.82■□□□□ 0.44
DDR1-229ENST00000396342 C3orf58Q8NDZ4 430 aa17.82■□□□□ 0.44
DDR1-229ENST00000396342 ST13P5Q8NFI4 369 aaPredicted RBP17.82■□□□□ 0.44
DDR1-229ENST00000396342 DDX12PQ92771 950 aa17.82■□□□□ 0.44
DDR1-229ENST00000396342 SECISBP2LQ93073 1101 aaKnown RBP17.82■□□□□ 0.44
DDR1-229ENST00000396342 C18orf25Q96B23 403 aaPredicted RBP17.82■□□□□ 0.44
DDR1-229ENST00000396342 ZBTB45Q96K62 511 aaPredicted RBP17.82■□□□□ 0.44
DDR1-229ENST00000396342 ZMAT2Q96NC0 199 aaKnown RBP17.82■□□□□ 0.44
DDR1-229ENST00000396342 MMTAG2Q9BU76 263 aaKnown RBP17.82■□□□□ 0.44
DDR1-229ENST00000396342 OSBPL6Q9BZF3 934 aa17.82■□□□□ 0.44
DDR1-229ENST00000396342 GPR88Q9GZN0 384 aa17.82■□□□□ 0.44
DDR1-229ENST00000396342 BRD9Q9H8M2 597 aa17.82■□□□□ 0.44
DDR1-229ENST00000396342 CCDC39Q9UFE4 941 aa17.82■□□□□ 0.44
DDR1-229ENST00000396342 INSL5Q9Y5Q6 135 aa17.82■□□□□ 0.44
DDR1-229ENST00000396342 CACNA1HO95180 2353 aa17.82■□□□□ 0.44
DDR1-229ENST00000396342 OR6C75A6NL08 312 aa17.81■□□□□ 0.44
DDR1-229ENST00000396342 FAM170BA6NMN3 283 aa17.81■□□□□ 0.44
DDR1-229ENST00000396342 MAN2B1O00754 1011 aa17.81■□□□□ 0.44
DDR1-229ENST00000396342 CXCL8P10145 99 aa17.81■□□□□ 0.44
DDR1-229ENST00000396342 EPHB3P54753 998 aa17.81■□□□□ 0.44
DDR1-229ENST00000396342 SLC12A3P55017 1021 aa17.81■□□□□ 0.44
DDR1-229ENST00000396342 TAF12Q16514 161 aa17.81■□□□□ 0.44
DDR1-229ENST00000396342 SLC10A6Q3KNW5 377 aa17.81■□□□□ 0.44
DDR1-229ENST00000396342 SLFN12LQ6IEE8 588 aa17.81■□□□□ 0.44
DDR1-229ENST00000396342 TAS1R3Q7RTX0 852 aa17.81■□□□□ 0.44
DDR1-229ENST00000396342 METTL23Q86XA0 190 aa17.81■□□□□ 0.44
DDR1-229ENST00000396342 E2F7Q96AV8 911 aa17.81■□□□□ 0.44
DDR1-229ENST00000396342 ELSPBP1Q96BH3 223 aa17.81■□□□□ 0.44
DDR1-229ENST00000396342 MSTO1Q9BUK6 570 aa17.81■□□□□ 0.44
DDR1-229ENST00000396342 TRMT61BQ9BVS5 477 aaKnown RBP17.81■□□□□ 0.44
DDR1-229ENST00000396342 TBX20Q9UMR3 447 aa17.81■□□□□ 0.44
DDR1-229ENST00000396342 ZFHX2Q9C0A1 2572 aaPredicted RBP17.8■□□□□ 0.44
DDR1-229ENST00000396342 WDR27A2RRH5 827 aa17.8■□□□□ 0.44
DDR1-229ENST00000396342 OGTO15294 1046 aa17.8■□□□□ 0.44
DDR1-229ENST00000396342 TRAK2O60296 914 aa17.8■□□□□ 0.44
DDR1-229ENST00000396342 KINO60870 393 aaKnown RBP17.8■□□□□ 0.44
DDR1-229ENST00000396342 FGF19O95750 216 aa17.8■□□□□ 0.44
DDR1-229ENST00000396342 ODC1P11926 461 aa17.8■□□□□ 0.44
DDR1-229ENST00000396342 MYL4P12829 197 aa17.8■□□□□ 0.44
DDR1-229ENST00000396342 NCKAP1LP55160 1127 aa17.8■□□□□ 0.44
DDR1-229ENST00000396342 CACNB1Q02641 598 aaPredicted RBP17.8■□□□□ 0.44
DDR1-229ENST00000396342 TMEM119Q4V9L6 283 aa17.8■□□□□ 0.44
DDR1-229ENST00000396342 SEZ6Q53EL9 994 aa17.8■□□□□ 0.44
DDR1-229ENST00000396342 ATRIPQ8WXE1 791 aa17.8■□□□□ 0.44
DDR1-229ENST00000396342 DNASE1L2Q92874 299 aa17.8■□□□□ 0.44
DDR1-229ENST00000396342 IRF7Q92985 503 aa17.8■□□□□ 0.44
DDR1-229ENST00000396342 PNMA5Q96PV4 448 aa17.8■□□□□ 0.44
DDR1-229ENST00000396342 FOXQ1Q9C009 403 aa17.8■□□□□ 0.44
DDR1-229ENST00000396342 KMT2EQ8IZD2 1858 aa17.8■□□□□ 0.44
DDR1-229ENST00000396342 MYO10Q9HD67 2058 aa17.79■□□□□ 0.44
DDR1-229ENST00000396342 VPS37CA5D8V6 355 aaPredicted RBP17.79■□□□□ 0.44
DDR1-229ENST00000396342 DPYSL4O14531 572 aa17.79■□□□□ 0.44
DDR1-229ENST00000396342 TWF1Q12792 350 aa17.79■□□□□ 0.44
DDR1-229ENST00000396342 TPRG1Q6ZUI0 275 aa17.79■□□□□ 0.44
DDR1-229ENST00000396342 FAM200AQ8TCP9 573 aa17.79■□□□□ 0.44
DDR1-229ENST00000396342 REEP2Q9BRK0 252 aa17.79■□□□□ 0.44
DDR1-229ENST00000396342 RPP25Q9BUL9 199 aaKnown RBP17.79■□□□□ 0.44
DDR1-229ENST00000396342 TUBGCP4Q9UGJ1 667 aa17.79■□□□□ 0.44
DDR1-229ENST00000396342 DSEQ9UL01 958 aa17.79■□□□□ 0.44
DDR1-229ENST00000396342 EXOC7Q9UPT5 735 aa17.79■□□□□ 0.44
DDR1-229ENST00000396342 R3HCC1Q9Y3T6 440 aaKnown RBP17.79■□□□□ 0.44
DDR1-229ENST00000396342 NPHP3-ACAD11A0A0J9YXS1 232 aa17.78■□□□□ 0.44
DDR1-229ENST00000396342 LRPAP1P30533 357 aa17.78■□□□□ 0.44
DDR1-229ENST00000396342 MRPL58Q14197 206 aaKnown RBP17.78■□□□□ 0.44
DDR1-229ENST00000396342 VEPH1Q14D04 833 aa17.78■□□□□ 0.44
DDR1-229ENST00000396342 POSTNQ15063 836 aa17.78■□□□□ 0.44
DDR1-229ENST00000396342 ARHGAP15Q53QZ3 475 aa17.78■□□□□ 0.44
DDR1-229ENST00000396342 OVOS1Q6IE37 1185 aa17.78■□□□□ 0.44
DDR1-229ENST00000396342 CD300LGQ6UXG3 332 aa17.78■□□□□ 0.44
DDR1-229ENST00000396342 ITIH5Q86UX2 942 aa17.78■□□□□ 0.44
DDR1-229ENST00000396342 THEM5Q8N1Q8 247 aa17.78■□□□□ 0.44
DDR1-229ENST00000396342 DEPDC1BQ8WUY9 529 aa17.78■□□□□ 0.44
DDR1-229ENST00000396342 LARP4BQ92615 738 aaKnown RBP17.78■□□□□ 0.44
DDR1-229ENST00000396342 SMARCD2Q92925 531 aa17.78■□□□□ 0.44
DDR1-229ENST00000396342 GCNAQ96QF7 691 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms