RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 SCLYQ96I15 445 aa16.56■□□□□ 0.24
VAMP1-202ENST00000396308 ZNF830Q96NB3 372 aaPredicted RBP16.56■□□□□ 0.24
VAMP1-202ENST00000396308 WNT8AQ9H1J5 351 aa16.56■□□□□ 0.24
VAMP1-202ENST00000396308 ELAC1Q9H777 363 aaKnown RBP16.56■□□□□ 0.24
VAMP1-202ENST00000396308 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.56■□□□□ 0.24
VAMP1-202ENST00000396308 TMEM161AQ9NX61 479 aa16.56■□□□□ 0.24
VAMP1-202ENST00000396308 AGAP1Q9UPQ3 857 aa16.56■□□□□ 0.24
VAMP1-202ENST00000396308 ZKSCAN5Q9Y2L8 839 aa16.56■□□□□ 0.24
VAMP1-202ENST00000396308 ARL5CA6NH57 179 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 C9IYK1 514 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 KIAA0355O15063 1070 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 TIMP1P01033 207 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 PFKMP08237 780 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 EN2P19622 333 aaPredicted RBP16.55■□□□□ 0.24
VAMP1-202ENST00000396308 JAM2P57087 298 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 ARID5AQ03989 594 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 KLHL30Q0D2K2 578 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 GRIK3Q13003 919 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 CUL2Q13617 745 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 MEA1Q16626 185 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 DEFB128Q7Z7B8 93 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 ZSCAN30Q86W11 494 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 RPUSD2Q8IZ73 545 aaKnown RBP16.55■□□□□ 0.24
VAMP1-202ENST00000396308 TTC39CQ8N584 583 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 LRRC52Q8N7C0 313 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 LPPQ93052 612 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 HPDLQ96IR7 371 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 FAM84AQ96KN4 292 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 GAD1Q99259 594 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 OSBPL7Q9BZF2 842 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 RNF39Q9H2S5 420 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 KCNF1Q9H3M0 494 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 AIPL1Q9NZN9 384 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 TUBGCP4Q9UGJ1 667 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 PCDHB7Q9Y5E2 793 aa16.55■□□□□ 0.24
VAMP1-202ENST00000396308 LTBP2Q14767 1821 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 KIAA0100Q14667 2235 aaKnown RBP16.54■□□□□ 0.24
VAMP1-202ENST00000396308 MEFVO15553 781 aaPredicted RBP16.54■□□□□ 0.24
VAMP1-202ENST00000396308 EFCAB14O75071 495 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 LRRN2O75325 713 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 GFPT2O94808 682 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 STAU1O95793 577 aaKnown RBP16.54■□□□□ 0.24
VAMP1-202ENST00000396308 KRT5P13647 590 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 FECHP22830 423 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 KCNJ6P48051 423 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 IKBKEQ14164 716 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 SV2CQ496J9 727 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 AGMOQ6ZNB7 445 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 CCDC170Q8IYT3 715 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 TXLNBQ8N3L3 684 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 HELQQ8TDG4 1101 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 CCDC42Q96M95 316 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 ZFP42Q96MM3 310 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 ZMAT2Q96NC0 199 aaKnown RBP16.54■□□□□ 0.24
VAMP1-202ENST00000396308 HTATIP2Q9BUP3 242 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 FAM124BQ9H5Z6 455 aaPredicted RBP16.54■□□□□ 0.24
VAMP1-202ENST00000396308 LUC7LQ9NQ29 371 aaKnown RBP16.54■□□□□ 0.24
VAMP1-202ENST00000396308 KANSL3Q9P2N6 904 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 SIX4Q9UIU6 781 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 INPP5FQ9Y2H2 1132 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 ALPK3Q96L96 1907 aa16.54■□□□□ 0.24
VAMP1-202ENST00000396308 RNF225M0QZC1 329 aaPredicted RBP16.53■□□□□ 0.24
VAMP1-202ENST00000396308 AKR1B10O60218 316 aa16.53■□□□□ 0.24
VAMP1-202ENST00000396308 ANXA13P27216 316 aa16.53■□□□□ 0.24
VAMP1-202ENST00000396308 PDE6CP51160 858 aa16.53■□□□□ 0.24
VAMP1-202ENST00000396308 SCNN1GP51170 649 aa16.53■□□□□ 0.24
VAMP1-202ENST00000396308 BPIFB4P59827 614 aa16.53■□□□□ 0.24
VAMP1-202ENST00000396308 ZBTB6Q15916 424 aa16.53■□□□□ 0.24
VAMP1-202ENST00000396308 SPOPLQ6IQ16 392 aa16.53■□□□□ 0.24
VAMP1-202ENST00000396308 DPY19L2P1Q6NXN4 242 aa16.53■□□□□ 0.24
VAMP1-202ENST00000396308 ZNF598Q86UK7 904 aaKnown RBP16.53■□□□□ 0.24
VAMP1-202ENST00000396308 SHC3Q92529 594 aa16.53■□□□□ 0.24
VAMP1-202ENST00000396308 TATDN2Q93075 761 aa16.53■□□□□ 0.24
VAMP1-202ENST00000396308 C18orf25Q96B23 403 aaPredicted RBP16.53■□□□□ 0.24
VAMP1-202ENST00000396308 UROC1Q96N76 676 aa16.53■□□□□ 0.24
VAMP1-202ENST00000396308 FAM193BQ96PV7 902 aaPredicted RBP16.53■□□□□ 0.24
VAMP1-202ENST00000396308 PPP1R10Q96QC0 940 aaKnown RBP16.53■□□□□ 0.24
VAMP1-202ENST00000396308 VRTNQ9H8Y1 702 aa16.53■□□□□ 0.24
VAMP1-202ENST00000396308 NXF1Q9UBU9 619 aaKnown RBP16.53■□□□□ 0.24
VAMP1-202ENST00000396308 SSU72P8A0A1W2PR75 194 aa16.52■□□□□ 0.24
VAMP1-202ENST00000396308 PTGESO14684 152 aa16.52■□□□□ 0.24
VAMP1-202ENST00000396308 CST3P01034 146 aaPredicted RBP16.52■□□□□ 0.24
VAMP1-202ENST00000396308 PAX3P23760 479 aa16.52■□□□□ 0.24
VAMP1-202ENST00000396308 RPL9P32969 192 aaKnown RBP16.52■□□□□ 0.24
VAMP1-202ENST00000396308 TAF6P49848 677 aa16.52■□□□□ 0.24
VAMP1-202ENST00000396308 GUCY2FP51841 1108 aa16.52■□□□□ 0.24
VAMP1-202ENST00000396308 FAM189BP81408 668 aa16.52■□□□□ 0.24
VAMP1-202ENST00000396308 RNASELQ05823 741 aaKnown RBP16.52■□□□□ 0.24
VAMP1-202ENST00000396308 SPA17Q15506 151 aa16.52■□□□□ 0.24
VAMP1-202ENST00000396308 WDR72Q3MJ13 1102 aa16.52■□□□□ 0.24
VAMP1-202ENST00000396308 C9orf57Q5W0N0 161 aa16.52■□□□□ 0.24
VAMP1-202ENST00000396308 MFSD5Q6N075 450 aa16.52■□□□□ 0.24
VAMP1-202ENST00000396308 SCARA5Q6ZMJ2 495 aa16.52■□□□□ 0.24
VAMP1-202ENST00000396308 NPAS4Q8IUM7 802 aa16.52■□□□□ 0.24
VAMP1-202ENST00000396308 LINC01599Q8WXQ3 324 aa16.52■□□□□ 0.24
VAMP1-202ENST00000396308 DDX27Q96GQ7 796 aaKnown RBP16.52■□□□□ 0.24
VAMP1-202ENST00000396308 MRPL9Q9BYD2 267 aaKnown RBP16.52■□□□□ 0.24
VAMP1-202ENST00000396308 CYP3A43Q9HB55 503 aa16.52■□□□□ 0.24
VAMP1-202ENST00000396308 AJAP1Q9UKB5 411 aaPredicted RBP16.52■□□□□ 0.24
VAMP1-202ENST00000396308 NUB1Q9Y5A7 615 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms