RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 PRKCBP05771 671 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 YARSP54577 528 aaKnown RBP14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 GRB14Q14449 540 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 ZNF568Q3ZCX4 644 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 ZNF394Q53GI3 561 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 SND1Q7KZF4 910 aaKnown RBP eCLIP14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 CPA5Q8WXQ8 436 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 DDX47Q9H0S4 455 aaKnown RBP14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 A0A0B4J269 797 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 HEXIM1O94992 359 aaKnown RBP14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 HMGCRP04035 888 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 THPOP40225 353 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 MXD4Q14582 209 aaPredicted RBP14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 SPOUT1Q5T280 376 aaKnown RBP14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 SLFN12LQ6IEE8 588 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 TMEM270Q6UE05 265 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 USP38Q8NB14 1042 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 AFAP1L1Q8TED9 768 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 TMEM174Q8WUU8 243 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 ZNF653Q96CK0 615 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 SUDS3Q9H7L9 328 aaPredicted RBP14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 STIM2Q9P246 746 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 NOC2LQ9Y3T9 749 aaKnown RBP14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 MYO9BQ13459 2157 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 C17orf102A2RUQ5 167 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 VNN1O95497 513 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 TMEM191BP0C7N4 346 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 HSPA6P17066 643 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 PSMD6Q15008 389 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 IER5Q5VY09 327 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 SYCE1Q8N0S2 351 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 RIN2Q8WYP3 895 aaPredicted RBP14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 SELENOOQ9BVL4 669 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 KDM4CQ9H3R0 1056 aa14.98□□□□□ -0.01
PPP3CA-202ENST00000394853 RRN3P2A6NIE6 340 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 MAP2K7O14733 419 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 CD58P19256 250 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 GPC5P78333 572 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 GRIK4Q16099 956 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 ZNF792Q3KQV3 632 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 ZACNQ401N2 412 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 FMNL3Q8IVF7 1028 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 HACE1Q8IYU2 909 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 DNAJB3Q8WWF6 145 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 MTMR12Q9C0I1 747 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 SENP6Q9GZR1 1112 aaPredicted RBP14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 APOBEC3GQ9HC16 384 aaKnown RBP14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 INTUQ9ULD6 942 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 ALG6Q9Y672 507 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 H0YHG0 523 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 KRIT1O00522 736 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 SNAI1O95863 264 aaPredicted RBP14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 CST3P01034 146 aaPredicted RBP14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 FGGP02679 453 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 C4BPAP04003 597 aaKnown RBP14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 MARCKSL1P49006 195 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 SLC26A2P50443 739 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 SARNPP82979 210 aaKnown RBP14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 MFSD10Q14728 455 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 MINDY3Q9H8M7 445 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 DIS3Q9Y2L1 958 aaKnown RBP14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 PCDHB4Q9Y5E5 795 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 ARID2Q68CP9 1835 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 TARSL2A2RTX5 802 aaKnown RBP14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 PQBP1O60828 265 aaKnown RBP14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 CSPG5O95196 566 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 INHAP05111 366 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 CFHP08603 1231 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 CARSP49589 748 aaKnown RBP14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 MAP9Q49MG5 647 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 SCARA5Q6ZMJ2 495 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 ARL10Q8N8L6 244 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 MRPL4Q9BYD3 311 aaKnown RBP14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 KIAA1586Q9HCI6 787 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 IRAK4Q9NWZ3 460 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 NFU1Q9UMS0 254 aa14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 PIN4Q9Y237 131 aaKnown RBP14.97□□□□□ -0.01
PPP3CA-202ENST00000394853 A0A0A6YYK5 440 aaPredicted RBP14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 RAD51CO43502 376 aa14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 MSCO60682 206 aa14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 RTN2O75298 545 aa14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 PSEN2P49810 448 aa14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 GUCY2FP51841 1108 aa14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 C1QTNF8P60827 252 aa14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 KRT35Q92764 455 aa14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 NUP85Q9BW27 656 aa14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 INPP5FQ9Y2H2 1132 aa14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 NR2E1Q9Y466 385 aa14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 PPME1Q9Y570 386 aa14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 A0A087WZ62 844 aa14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 ATP8B1O43520 1251 aa14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 CDR2Q01850 454 aa14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 EEF1DP3Q658K8 133 aa14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 ABI1Q8IZP0 508 aa14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 FDXACB1Q9BRP7 624 aaPredicted RBP14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 MTG1Q9BT17 334 aaPredicted RBP14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 NUB1Q9Y5A7 615 aa14.96□□□□□ -0.01
PPP3CA-202ENST00000394853 PGRMC1O00264 195 aaKnown RBP14.96□□□□□ -0.02
PPP3CA-202ENST00000394853 MCM3P25205 808 aa14.96□□□□□ -0.02
PPP3CA-202ENST00000394853 GTF2H1P32780 548 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms