RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ASNSP08243 561 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 CNGA1P29973 690 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 CAP2P40123 477 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 CXCL9Q07325 125 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 ANKRD20A2Q5SQ80 823 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 ANKRD20A1Q5TYW2 823 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 USP37Q86T82 979 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 MTDHQ86UE4 582 aaKnown RBP14.01□□□□□ -0.17
NFKB1-202ENST00000394820 HSPH1Q92598 858 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 SNF8Q96H20 258 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 HSD17B14Q9BPX1 270 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 VCXQ9H320 206 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 COL20A1Q9P218 1284 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 PFASO15067 1338 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 IGLV3-22A0A075B6J6 115 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 C2orf71A6NGG8 1288 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 H7C0C1 242 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 MAN1A1P33908 653 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 ATP5OP48047 213 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 PPP3CAQ08209 521 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 TRAF1Q13077 416 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 CNGA2Q16280 664 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 FAXCQ5TGI0 409 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 LVRNQ6Q4G3 990 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 C1orf186Q6ZWK4 172 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 ZNF720Q7Z2F6 126 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 RHPN2Q8IUC4 686 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 TEX2Q8IWB9 1127 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 POLR3CQ9BUI4 534 aaPredicted RBP14.01□□□□□ -0.17
NFKB1-202ENST00000394820 PHTF1Q9UMS5 762 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 TRAF3IP3Q9Y228 551 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 PEX10O60683 326 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 PSMD10O75832 226 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 CIB2O75838 187 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 ENO1P06733 434 aaKnown RBP14□□□□□ -0.17
NFKB1-202ENST00000394820 GCLCP48506 637 aaPredicted RBP14□□□□□ -0.17
NFKB1-202ENST00000394820 RPS6P62753 249 aaKnown RBP14□□□□□ -0.17
NFKB1-202ENST00000394820 COBLL1Q53SF7 1204 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 TAS1R2Q8TE23 839 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 GRK7Q8WTQ7 553 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 MCM8Q9UJA3 840 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 TOM1L1O75674 476 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 INHBAP08476 426 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 KRT4P19013 534 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 DMP1Q13316 513 aaPredicted RBP14□□□□□ -0.17
NFKB1-202ENST00000394820 RBBP5Q15291 538 aaKnown RBP14□□□□□ -0.17
NFKB1-202ENST00000394820 PPM1NQ8N819 430 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 TTC8Q8TAM2 541 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 KDM4CQ9H3R0 1056 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 ZHX2Q9Y6X8 837 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 CFAP73A6NFT4 308 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 WNT10BO00744 389 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 PLSCR1O15162 318 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 MAGEA4P43358 317 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 TRPC3Q13507 836 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 FITM2Q8N6M3 262 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 PARD3BQ8TEW8 1205 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 MXRA8Q9BRK3 442 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 NEU2Q9Y3R4 380 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 TTLL3Q9Y4R7 772 aa14□□□□□ -0.17
NFKB1-202ENST00000394820 MYH7BA7E2Y1 1941 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 RTN2O75298 545 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 CSDE1O75534 798 aaKnown RBP13.99□□□□□ -0.17
NFKB1-202ENST00000394820 TFAMQ00059 246 aaKnown RBP13.99□□□□□ -0.17
NFKB1-202ENST00000394820 SDCCAG8Q86SQ7 713 aaPredicted RBP13.99□□□□□ -0.17
NFKB1-202ENST00000394820 NOP9Q86U38 636 aaKnown RBP13.99□□□□□ -0.17
NFKB1-202ENST00000394820 LRRC57Q8N9N7 239 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 RUBCNQ92622 972 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 HEY1Q9Y5J3 304 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 TRPA1O75762 1119 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 RARGP13631 454 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 CLUL1Q15846 466 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 PKN2Q16513 984 aaKnown RBP13.99□□□□□ -0.17
NFKB1-202ENST00000394820 EML3Q32P44 896 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 TAF1BQ53T94 588 aaPredicted RBP13.99□□□□□ -0.17
NFKB1-202ENST00000394820 NLRX1Q86UT6 975 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 RFX6Q8HWS3 928 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 MREGQ8N565 214 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 ATXN7L3BQ96GX2 97 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 MYLK2Q9H1R3 596 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 TUFT1Q9NNX1 390 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.99□□□□□ -0.17
NFKB1-202ENST00000394820 FAM47DPA6NHR8 397 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 I3L4J1 428 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 KIF1CO43896 1103 aaKnown RBP13.99□□□□□ -0.17
NFKB1-202ENST00000394820 ATP9AO75110 1047 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 CDH16O75309 829 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 BAATQ14032 418 aaPredicted RBP13.99□□□□□ -0.17
NFKB1-202ENST00000394820 RCN1Q15293 331 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 CIAPIN1Q6FI81 312 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 MOXD1Q6UVY6 613 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 ZNF662Q6ZS27 426 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 CD302Q8IX05 232 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 PIP4K2CQ8TBX8 421 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 ATG4CQ96DT6 458 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 NAF1Q96HR8 494 aaKnown RBP13.99□□□□□ -0.17
NFKB1-202ENST00000394820 CFAP57Q96MR6 1250 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 FEM1BQ9UK73 627 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 CHMP2BQ9UQN3 213 aa13.99□□□□□ -0.17
NFKB1-202ENST00000394820 RREB1Q92766 1687 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms