RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 CHST7Q9NS84 486 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 FETUBQ9UGM5 382 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 SLC24A2Q9UI40 661 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 AGAP1Q9UPQ3 857 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 MROH7Q68CQ1 1323 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 DENND3A2RUS2 1198 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 TJP3O95049 919 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 LMNAP02545 664 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 SLURP2P0DP57 97 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 FYB2Q5VWT5 728 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 KRT27Q7Z3Y8 459 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 ANKS1BQ7Z6G8 1248 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 VSIG1Q86XK7 387 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 APLFQ8IW19 511 aaPredicted RBP10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 TEX9Q8N6V9 391 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 GDAP1Q8TB36 358 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 AGAP11Q8TF27 550 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 CNKSR1Q969H4 720 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 RBM15Q96T37 977 aaKnown RBP eCLIP10.66□□□□□ -0.72e-7■■■□□ 16.3
UBE2D3-208ENST00000394803 LRMDAQ9H2I8 198 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 IP6K2Q9UHH9 426 aa10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 COL11A2P13942 1736 aaPredicted RBP10.66□□□□□ -0.7
UBE2D3-208ENST00000394803 NFASCO94856 1347 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 GOLGA8IPA6NC78 632 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 GOLGA8JA6NMD2 632 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 TISP43B9A030 160 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 SMAPO00193 183 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 TP73O15350 636 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 GRIN3BO60391 1043 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 CYP1A1P04798 512 aaPredicted RBP10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 TAL1P17542 331 aaPredicted RBP10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 TBXAS1P24557 533 aaPredicted RBP10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 PHBP35232 272 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 NPTX2P47972 431 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 KCNJ2P63252 427 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 TAP1Q03518 808 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 C1QBPQ07021 282 aaKnown RBP10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 MORF4L2Q15014 288 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 LRRC38Q5VT99 294 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 SV2AQ7L0J3 742 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 FITM2Q8N6M3 262 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 LRRC8CQ8TDW0 803 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 TAS1R2Q8TE23 839 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 STAMBPL1Q96FJ0 436 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 LRRC37BQ96QE4 947 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 FNBP1Q96RU3 617 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 FRMD8P1Q9BZ68 369 aaPredicted RBP10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 TRIM6Q9C030 488 aaPredicted RBP10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 MTFR1LQ9H019 292 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 CTNNAL1Q9UBT7 734 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 NEU2Q9Y3R4 380 aa10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 ASTN2O75129 1339 aaPredicted RBP10.65□□□□□ -0.7
UBE2D3-208ENST00000394803 DNALI1O14645 258 aaPredicted RBP10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 MAFGO15525 162 aa10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 FDX1P10109 184 aa10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 RALAP11233 206 aa10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 TAC1P20366 129 aa10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 PTGER2P43116 358 aa10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 TMED2Q15363 201 aa10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 ZKSCAN8Q15776 578 aaPredicted RBP10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 EAPPQ56P03 285 aaPredicted RBP10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 FKBP1CQ5VVH2 108 aa10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 SLC30A10Q6XR72 485 aa10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 MON1BQ7L1V2 547 aa10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 PHF13Q86YI8 300 aaPredicted RBP10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 OGFOD1Q8N543 542 aa10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 ACER1Q8TDN7 264 aa10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 ATP6V0A1Q93050 837 aa10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 ZNF622Q969S3 477 aaKnown RBP eCLIP10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 SAAL1Q96ER3 474 aa10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 POP1Q99575 1024 aaKnown RBP10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 ETNK1Q9HBU6 452 aa10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 PARVAQ9NVD7 372 aa10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 EURLQ9NYK6 297 aa10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 CHORDC1Q9UHD1 332 aaPredicted RBP10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 SHOC2Q9UQ13 582 aa10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 DRG1Q9Y295 367 aaKnown RBP10.65□□□□□ -0.71
UBE2D3-208ENST00000394803 ZNFX1Q9P2E3 1918 aaKnown RBP10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 MYPNQ86TC9 1320 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 HNRNPDLO14979 420 aaKnown RBP10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 WDR46O15213 610 aaKnown RBP10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 EXTL3O43909 919 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 ZWINTO95229 277 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 ASNSP08243 561 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 KRT16P08779 473 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 RPSAP08865 295 aaKnown RBP10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 RRM1P23921 792 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 KLRC2P26717 231 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 PTPN7P35236 360 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 JAG1P78504 1218 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 PDK4Q16654 411 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 ZC3H12AQ5D1E8 599 aaKnown RBP10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 CENPUQ71F23 418 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 TRABD2AQ86V40 505 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 ATG4AQ8WYN0 398 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 LPAR1Q92633 364 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 BICD1Q96G01 975 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 SENP7Q9BQF6 1050 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 DDX56Q9NY93 547 aaKnown RBP10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 ADAM22Q9P0K1 906 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms