RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 TRMT10CQ7L0Y3 403 aaKnown RBP11.19□□□□□ -0.62
ACTN1-203ENST00000394419 MAP4K3Q8IVH8 894 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 TRAIPQ9BWF2 469 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 CYP26B1Q9NR63 512 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 ANKEF1Q9NU02 776 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.19□□□□□ -0.627e-7■■■■□ 25.5
ACTN1-203ENST00000394419 SAE1Q9UBE0 346 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-203ENST00000394419 ADAMTSL1Q8N6G6 1762 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 ZNF536O15090 1300 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 CYP1A2P05177 515 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 FKBP1AP62942 108 aaKnown RBP11.19□□□□□ -0.62
ACTN1-203ENST00000394419 NOP14P78316 857 aaKnown RBP11.19□□□□□ -0.62
ACTN1-203ENST00000394419 SETDB1Q15047 1291 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 KCNT1Q5JUK3 1230 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 ZBTB41Q5SVQ8 909 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 MIS18BP1Q6P0N0 1132 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 SLC17A8Q8NDX2 589 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 TLCD1Q96CP7 247 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 KLF6Q99612 283 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-203ENST00000394419 ECT2Q9H8V3 914 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 SLC38A10Q9HBR0 1119 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 NENFQ9UMX5 172 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 GINS2Q9Y248 185 aa11.19□□□□□ -0.62
ACTN1-203ENST00000394419 TTC4O95801 387 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 GTF2H1P32780 548 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 MMP13P45452 471 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 TAS2R40P59535 323 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 RPL7AP62424 266 aaKnown RBP11.18□□□□□ -0.62
ACTN1-203ENST00000394419 LACTBP83111 547 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-203ENST00000394419 DNAJC3Q13217 504 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 NCOA4Q13772 614 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 EMC2Q15006 297 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 CNGA2Q16280 664 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 ARHGEF18Q6ZSZ5 1173 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 LPAR1Q92633 364 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 N4BP2L2Q92802 583 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-203ENST00000394419 SYT11Q9BT88 431 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 DEFB129Q9H1M3 183 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 TPX2Q9ULW0 747 aaKnown RBP11.18□□□□□ -0.62
ACTN1-203ENST00000394419 USP15Q9Y4E8 981 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-203ENST00000394419 IKBKGQ9Y6K9 419 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 ADGRA3Q8IWK6 1321 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 SBF2Q86WG5 1849 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 INO80B-WBP1J3KQ70 363 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 GPC3P51654 580 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 DRG2P55039 364 aaKnown RBP11.18□□□□□ -0.62
ACTN1-203ENST00000394419 IGBP1P78318 339 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 BBS9Q3SYG4 887 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 YTHDF3Q7Z739 585 aaKnown RBP11.18□□□□□ -0.62
ACTN1-203ENST00000394419 C1orf131Q8NDD1 294 aaKnown RBP11.18□□□□□ -0.62
ACTN1-203ENST00000394419 ART4Q93070 314 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 TRIM11Q96F44 468 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 NLRP4Q96MN2 994 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 CALN1Q9BXU9 219 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 INO80BQ9C086 356 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-203ENST00000394419 DCLK3Q9C098 648 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 NAALADL1Q9UQQ1 740 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 ATRNL1Q5VV63 1379 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 TMEM191BP0C7N4 346 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 MAN1A1P33908 653 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 MAGEA4P43358 317 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 CLNS1AP54105 237 aaKnown RBP11.18□□□□□ -0.62
ACTN1-203ENST00000394419 IL9RQ01113 521 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 MYO1EQ12965 1108 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 NCAPG2Q86XI2 1143 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 RSAD2Q8WXG1 361 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 FAM81BQ96LP2 452 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 PLCD4Q9BRC7 762 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 EPB41L4BQ9H329 900 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 ZNF302Q9NR11 478 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 NEU2Q9Y3R4 380 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 L3MBTL1Q9Y468 752 aa11.18□□□□□ -0.62
ACTN1-203ENST00000394419 VWA5AO00534 786 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 NOP56O00567 594 aaKnown RBP11.17□□□□□ -0.62
ACTN1-203ENST00000394419 NCKAP1LP55160 1127 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 BASP1P80723 227 aaKnown RBP11.17□□□□□ -0.62
ACTN1-203ENST00000394419 ZBTB16Q05516 673 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 PDIA2Q13087 525 aaKnown RBP11.17□□□□□ -0.62
ACTN1-203ENST00000394419 CUL2Q13617 745 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 SPATA21Q7Z572 469 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 SMC6Q96SB8 1091 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 HERPUD2Q9BSE4 406 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 TMEM121Q9BTD3 319 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 NINJ2Q9NZG7 142 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 DNPEPQ9ULA0 475 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 UMODL1Q5DID0 1318 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 CDK5RAP2Q96SN8 1893 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 ONECUT3O60422 494 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-203ENST00000394419 ZBTB48P10074 688 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-203ENST00000394419 MAPTP10636 758 aaKnown RBP11.17□□□□□ -0.62
ACTN1-203ENST00000394419 DRP2Q13474 957 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 TDRD10Q5VZ19 366 aaKnown RBP11.17□□□□□ -0.62
ACTN1-203ENST00000394419 ERICH1Q86X53 443 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 SUGP1Q8IWZ8 645 aaKnown RBP11.17□□□□□ -0.62
ACTN1-203ENST00000394419 PALM2Q8IXS6 379 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 LRRC71Q8N4P6 559 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 OR5B17Q8NGF7 314 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 SEC14L1Q92503 715 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 FHDC1Q9C0D6 1143 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-203ENST00000394419 CNOT7Q9UIV1 285 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms