RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 TMEM130Q8N3G9 435 aa20.55■□□□□ 0.88
PDLIM7-204ENST00000393546 PIK3R5Q8WYR1 880 aa20.55■□□□□ 0.88
PDLIM7-204ENST00000393546 ANKRD36BP1Q96IX9 119 aa20.55■□□□□ 0.88
PDLIM7-204ENST00000393546 SUSD3Q96L08 255 aa20.55■□□□□ 0.88
PDLIM7-204ENST00000393546 FNBP1Q96RU3 617 aa20.55■□□□□ 0.88
PDLIM7-204ENST00000393546 FNIP2Q9P278 1114 aa20.55■□□□□ 0.88
PDLIM7-204ENST00000393546 BRWD1Q9NSI6 2320 aa20.55■□□□□ 0.88
PDLIM7-204ENST00000393546 EYSQ5T1H1 3165 aa20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 ANO9A1A5B4 782 aa20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 PIRO00625 290 aa20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 ADH1AP07327 375 aa20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 TMEM191BP0C7N4 346 aa20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 RPL13P26373 211 aaKnown RBP20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 LTBRP36941 435 aa20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 TFF2Q03403 129 aa20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 CYP24A1Q07973 514 aa20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 STIM1Q13586 685 aa20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 PSMD6Q15008 389 aa20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 NFIL3Q16649 462 aa20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 DUOXA2Q1HG44 320 aa20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 TMEM184AQ6ZMB5 413 aa20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 LNX1Q8TBB1 728 aaPredicted RBP20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 MFSD14AQ96MC6 490 aa20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 INTS13Q9NVM9 706 aa20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 FRMD4BQ9Y2L6 1034 aa20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 REV3LO60673 3130 aa20.54■□□□□ 0.88
PDLIM7-204ENST00000393546 SYN3O14994 580 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 TEX28O15482 410 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 GLP2RO95838 553 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 TNNC2P02585 160 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 TNNI1P19237 187 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 TKTP29401 623 aaKnown RBP20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 PPP1R2P41236 205 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 LILRA4P59901 499 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 KCNC3Q14003 757 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 PSMD5Q16401 504 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 PRSS55Q6UWB4 352 aaPredicted RBP20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 DSTYKQ6XUX3 929 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 ANKS3Q6ZW76 656 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 WDR49Q8IV35 697 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 APPL2Q8NEU8 664 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 SLC22A17Q8WUG5 538 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 CASP10Q92851 521 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 CCDC127Q96BQ5 260 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 KIAA1468Q9P260 1216 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 PCDHB8Q9UN66 801 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 R3HCC1Q9Y3T6 440 aaKnown RBP20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 HCFC2Q9Y5Z7 792 aa20.53■□□□□ 0.88
PDLIM7-204ENST00000393546 PRUNE2Q8WUY3 3088 aa20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 H3BQ06 376 aaPredicted RBP20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 BIN1O00499 593 aa20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 PPEF2O14830 753 aa20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 DLATP10515 647 aaKnown RBP20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 NR2F2P24468 414 aa20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 DLX2Q07687 328 aaPredicted RBP20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 ADAM9Q13443 819 aa20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 LEXMQ3ZCV2 418 aa20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 CEP135Q66GS9 1140 aa20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 LMBRD2Q68DH5 695 aaPredicted RBP20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 CENPPQ6IPU0 288 aa20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 ADSSL1Q8N142 457 aa20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 CSGALNACT2Q8N6G5 542 aa20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 VN1R2Q8NFZ6 395 aa20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 ASB2Q96Q27 587 aa20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 TSG101Q99816 390 aa20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 CLSTN2Q9H4D0 955 aa20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 ITGA11Q9UKX5 1188 aa20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 AGAP1Q9UPQ3 857 aa20.52■□□□□ 0.88
PDLIM7-204ENST00000393546 ARHGEF37A1IGU5 675 aa20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 H7C4K7 107 aa20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 M0QZQ0 153 aa20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 TBX10O75333 385 aa20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 ITGB3P05106 788 aa20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 RPL17P18621 184 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 AARSP49588 968 aaKnown RBP eCLIP20.51■□□□□ 0.874e-9■■□□□ 11.9
PDLIM7-204ENST00000393546 CASP4P49662 377 aa20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 TAF6P49848 677 aa20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 CLCN4P51793 760 aa20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 RBP5P82980 135 aa20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 RBM10P98175 930 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 MORC3Q14149 939 aa20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 EDRF1Q3B7T1 1238 aa20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 VARS2Q5ST30 1063 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 C1orf127Q8N9H9 656 aa20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 DHTKD1Q96HY7 919 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 CGRRF1Q99675 332 aa20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 CLSTN3Q9BQT9 956 aa20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 MTMR12Q9C0I1 747 aa20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 CLEC1BQ9P126 229 aa20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 CD207Q9UJ71 328 aa20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 BARX2Q9UMQ3 279 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 BACE2Q9Y5Z0 518 aa20.51■□□□□ 0.87
PDLIM7-204ENST00000393546 PSMA7O14818 248 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 C1RP00736 705 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 KRT19P08727 400 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 EPCAMP16422 314 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 HOXB8P17481 243 aaPredicted RBP20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 POLR2BP30876 1174 aaKnown RBP20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 PNPLA4P41247 253 aa20.5■□□□□ 0.87
PDLIM7-204ENST00000393546 PUS10Q3MIT2 529 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms