RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 INHBAP08476 426 aa8.58□□□□□ -1.04
ATXN3-203ENST00000393287 HARS2P49590 506 aaKnown RBP8.58□□□□□ -1.04
ATXN3-203ENST00000393287 ZNF135P52742 658 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-203ENST00000393287 CPLX4Q7Z7G2 160 aa8.58□□□□□ -1.04
ATXN3-203ENST00000393287 GANCQ8TET4 914 aa8.58□□□□□ -1.04
ATXN3-203ENST00000393287 KCNMB3Q9NPA1 279 aa8.58□□□□□ -1.04
ATXN3-203ENST00000393287 RGPD5Q99666 1765 aa8.58□□□□□ -1.04
ATXN3-203ENST00000393287 CNTNAP1P78357 1384 aa8.58□□□□□ -1.04
ATXN3-203ENST00000393287 FAM205CA6NFA0 338 aa8.58□□□□□ -1.04
ATXN3-203ENST00000393287 XYLBO75191 536 aa8.58□□□□□ -1.04
ATXN3-203ENST00000393287 CIB2O75838 187 aa8.58□□□□□ -1.04
ATXN3-203ENST00000393287 ATN1P54259 1190 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-203ENST00000393287 RABGGTAQ92696 567 aa8.58□□□□□ -1.04
ATXN3-203ENST00000393287 FAM129AQ9BZQ8 928 aa8.58□□□□□ -1.04
ATXN3-203ENST00000393287 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.58□□□□□ -1.04
ATXN3-203ENST00000393287 FAN1Q9Y2M0 1017 aa8.58□□□□□ -1.04
ATXN3-203ENST00000393287 TROVE2P10155 538 aaKnown RBP eCLIP8.57□□□□□ -1.04
ATXN3-203ENST00000393287 HSPA8P11142 646 aaKnown RBP8.57□□□□□ -1.04
ATXN3-203ENST00000393287 DDX5P17844 614 aaKnown RBP8.57□□□□□ -1.04
ATXN3-203ENST00000393287 CTNNA1P35221 906 aaKnown RBP8.57□□□□□ -1.04
ATXN3-203ENST00000393287 DUSP28Q4G0W2 176 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 KLC3Q6P597 504 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 RAB42Q8N4Z0 105 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 NGRNQ9NPE2 291 aaKnown RBP8.57□□□□□ -1.04
ATXN3-203ENST00000393287 FAM187AA6NFU0 413 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 MAFO75444 373 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-203ENST00000393287 RTN3O95197 1032 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-203ENST00000393287 PPM1AP35813 382 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 ETFBP38117 255 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 ADCYAP1R1P41586 468 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 CUL2Q13617 745 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 SKIV2LQ15477 1246 aaKnown RBP8.57□□□□□ -1.04
ATXN3-203ENST00000393287 LY6KQ17RY6 165 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 DLK2Q6UY11 383 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 CCDC121Q6ZUS5 278 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 B4GALNT4Q76KP1 1039 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 CTAGE3PQ8IX95 158 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 UCMAQ8WVF2 138 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 SCG3Q8WXD2 468 aaKnown RBP8.57□□□□□ -1.04
ATXN3-203ENST00000393287 PHF20L1A8MW92 1017 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 KDM1AO60341 852 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 CHRNA3P32297 505 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 PTPROQ16827 1216 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 CCDC13Q8IYE1 715 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 DNAAF3Q8N9W5 541 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 ZNF507Q8TCN5 953 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 DESI2Q9BSY9 194 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 TRIM31Q9BZY9 425 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 DDX41Q9UJV9 622 aaKnown RBP8.57□□□□□ -1.04
ATXN3-203ENST00000393287 UBA1P22314 1058 aaKnown RBP8.57□□□□□ -1.04
ATXN3-203ENST00000393287 VEGFBP49765 207 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 ARL4CP56559 192 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 YWHAGP61981 247 aaKnown RBP eCLIP8.57□□□□□ -1.04
ATXN3-203ENST00000393287 DR1Q01658 176 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 ZNF720Q7Z2F6 126 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 CALCOCO1Q9P1Z2 691 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 SMIM35A0A1B0GVV1 85 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 TRIM66O15016 1216 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 CRYBB1P53674 252 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-203ENST00000393287 ROR1Q01973 937 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 SMARCB1Q12824 385 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 GOLGA7BQ2TAP0 167 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 RABGAP1LQ5R372 815 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 C11orf70Q9BRQ4 267 aa8.57□□□□□ -1.04
ATXN3-203ENST00000393287 KRT3P12035 628 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 SLC11A2P49281 568 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 ACOT2P49753 483 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 TPI1P60174 286 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 CYP24A1Q07973 514 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 DEFB118Q96PH6 123 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 ERGIC2Q96RQ1 377 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 FSD1LQ9BXM9 530 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 PORCNQ9H237 461 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 THG1LQ9NWX6 298 aaKnown RBP8.56□□□□□ -1.04
ATXN3-203ENST00000393287 IQANK1A0A1B0GTG1 560 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 ENPEPQ07075 957 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 BSPRYQ5W0U4 402 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 CCDC149Q6ZUS6 474 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 PDIK1LQ8N165 341 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.56□□□□□ -1.04
ATXN3-203ENST00000393287 HPSEQ9Y251 543 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 SMIM23A6NLE4 172 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 SMIM10L2AP0DMW4 78 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 SMIM10L2BP0DMW5 78 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 BCAT1P54687 386 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 HEATR6Q6AI08 1181 aaKnown RBP8.56□□□□□ -1.04
ATXN3-203ENST00000393287 MTHFD1LQ6UB35 978 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 ADGRF2Q8IZF7 708 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 KIRREL3Q8IZU9 778 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 SLC35F6Q8N357 371 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 MYRIPQ8NFW9 859 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 MRPS31Q92665 395 aaKnown RBP8.56□□□□□ -1.04
ATXN3-203ENST00000393287 VPS39Q96JC1 886 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 SEPT5Q99719 369 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-203ENST00000393287 BTBD7Q9P203 1132 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 MAD1L1Q9Y6D9 718 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 FTLP02792 175 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-203ENST00000393287 ZNF286BP0CG31 522 aa8.56□□□□□ -1.04
ATXN3-203ENST00000393287 PPIGQ13427 754 aaKnown RBP eCLIP8.56□□□□□ -1.04
ATXN3-203ENST00000393287 RASGRP2Q7LDG7 609 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms