RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 C11orf70Q9BRQ4 267 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 RASAL2Q9UJF2 1139 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 MTUS1Q9ULD2 1270 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 LOC102724159A0A0B4J2E5 919 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 ASB14A6NK59 587 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 RPS6KA5O75582 802 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 RARAP10276 462 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 PROZP22891 400 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 ZNF132P52740 706 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 MYL6P60660 151 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 TFDP1Q14186 410 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 PWP2Q15269 919 aaKnown RBP27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 CYP1B1Q16678 543 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 EAPPQ56P03 285 aaPredicted RBP27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 EFCAB12Q6NXP0 572 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 MPZL3Q6UWV2 235 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 TSHZ1Q6ZSZ6 1077 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 FZD8Q9H461 694 aa27.31■■□□□ 1.96
SMARCD3-203ENST00000392811 H0YGN5 161 aa27.3■■□□□ 1.96
SMARCD3-203ENST00000392811 ACKR2O00590 384 aa27.3■■□□□ 1.96
SMARCD3-203ENST00000392811 SHOX2O60902 331 aaPredicted RBP27.3■■□□□ 1.96
SMARCD3-203ENST00000392811 CLCN3P51790 818 aa27.3■■□□□ 1.96
SMARCD3-203ENST00000392811 CEP85LQ5SZL2 805 aa27.3■■□□□ 1.96
SMARCD3-203ENST00000392811 CCDC137Q6PK04 289 aaKnown RBP27.3■■□□□ 1.96
SMARCD3-203ENST00000392811 ARMCX2Q7L311 632 aa27.3■■□□□ 1.96
SMARCD3-203ENST00000392811 PTPRHQ9HD43 1115 aa27.3■■□□□ 1.96
SMARCD3-203ENST00000392811 ZDHHC18Q9NUE0 388 aa27.3■■□□□ 1.96
SMARCD3-203ENST00000392811 ADAM22Q9P0K1 906 aa27.3■■□□□ 1.96
SMARCD3-203ENST00000392811 NFS1Q9Y697 457 aa27.3■■□□□ 1.96
SMARCD3-203ENST00000392811 INO80B-WBP1J3KQ70 363 aa27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 MYO1FO00160 1098 aa27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 B4GALT5O43286 388 aa27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 MTMR3Q13615 1198 aa27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 DUOXA2Q1HG44 320 aa27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 LIN9Q5TKA1 542 aa27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 ATF7IP2Q5U623 682 aa27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 PHF13Q86YI8 300 aaPredicted RBP27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 UBLCP1Q8WVY7 318 aaPredicted RBP27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 FMO2Q99518 471 aa27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 INO80BQ9C086 356 aaPredicted RBP27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 RNPEPQ9H4A4 650 aa27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 SNX24Q9Y343 169 aa27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 POTEJP0CG39 1038 aa27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 SLC1A1P43005 524 aa27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 DRG2P55039 364 aaKnown RBP27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 DHX9Q08211 1270 aaKnown RBP27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 SURF1Q15526 300 aa27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 DNAJC21Q5F1R6 531 aaKnown RBP27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 LRRC31Q6UY01 552 aa27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 EFCAB13Q8IY85 973 aa27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 THNSL1Q8IYQ7 743 aa27.29■■□□□ 1.96
SMARCD3-203ENST00000392811 HOXC6P09630 235 aa27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 ARHGAP1Q07960 439 aa27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 ZNF568Q3ZCX4 644 aa27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 MMS22LQ6ZRQ5 1243 aa27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 C1orf131Q8NDD1 294 aaKnown RBP27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 OR2W6PQ8NHA6 318 aa27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 SLC10A4Q96EP9 437 aa27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 VCPIP1Q96JH7 1222 aa27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 CALCOCO1Q9P1Z2 691 aa27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 COILP38432 576 aaPredicted RBP27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 TFAMQ00059 246 aaKnown RBP27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 PTP4A2Q12974 167 aa27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 GJC2Q5T442 439 aaPredicted RBP27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 EEF1DP3Q658K8 133 aa27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 CDR2LQ86X02 465 aaPredicted RBP27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 ZNF606Q8WXB4 792 aa27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 PLVAPQ9BX97 442 aa27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 MINDY3Q9H8M7 445 aa27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 ERAP1Q9NZ08 941 aa27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 PNMA3Q9UL41 463 aa27.28■■□□□ 1.96
SMARCD3-203ENST00000392811 FSCN2O14926 492 aa27.27■■□□□ 1.96
SMARCD3-203ENST00000392811 PROSCO94903 275 aa27.27■■□□□ 1.96
SMARCD3-203ENST00000392811 C22orf31O95567 290 aa27.27■■□□□ 1.96
SMARCD3-203ENST00000392811 OSTNP61366 133 aa27.27■■□□□ 1.96
SMARCD3-203ENST00000392811 MBTD1Q05BQ5 628 aa27.27■■□□□ 1.96
SMARCD3-203ENST00000392811 MAMLD1Q13495 774 aa27.27■■□□□ 1.96
SMARCD3-203ENST00000392811 LLGL1Q15334 1064 aa27.27■■□□□ 1.96
SMARCD3-203ENST00000392811 SGSM1Q2NKQ1 1148 aa27.27■■□□□ 1.96
SMARCD3-203ENST00000392811 C12orf50Q8NA57 414 aaPredicted RBP27.27■■□□□ 1.96
SMARCD3-203ENST00000392811 ATP6V1G3Q96LB4 118 aa27.27■■□□□ 1.96
SMARCD3-203ENST00000392811 TXLNGYQ9BZA5 131 aa27.27■■□□□ 1.96
SMARCD3-203ENST00000392811 NIF3L1Q9GZT8 377 aa27.27■■□□□ 1.96
SMARCD3-203ENST00000392811 TMBIM4Q9HC24 238 aa27.27■■□□□ 1.96
SMARCD3-203ENST00000392811 PODXLO00592 558 aa27.26■■□□□ 1.95
SMARCD3-203ENST00000392811 PPFIA2O75334 1257 aa27.26■■□□□ 1.95
SMARCD3-203ENST00000392811 CD58P19256 250 aa27.26■■□□□ 1.95
SMARCD3-203ENST00000392811 TMEM132AQ24JP5 1023 aa27.26■■□□□ 1.95
SMARCD3-203ENST00000392811 ZDHHC24Q6UX98 284 aa27.26■■□□□ 1.95
SMARCD3-203ENST00000392811 CEP120Q8N960 986 aa27.26■■□□□ 1.95
SMARCD3-203ENST00000392811 GPRC5AQ8NFJ5 357 aa27.26■■□□□ 1.95
SMARCD3-203ENST00000392811 CAPS2Q9BXY5 557 aa27.26■■□□□ 1.95
SMARCD3-203ENST00000392811 GRHL1Q9NZI5 618 aa27.26■■□□□ 1.95
SMARCD3-203ENST00000392811 IGBP1P78318 339 aa27.26■■□□□ 1.95
SMARCD3-203ENST00000392811 SKOR1P84550 965 aa27.26■■□□□ 1.95
SMARCD3-203ENST00000392811 C1QBPQ07021 282 aaKnown RBP27.26■■□□□ 1.95
SMARCD3-203ENST00000392811 ZNF844Q08AG5 666 aa27.26■■□□□ 1.95
SMARCD3-203ENST00000392811 TRPC3Q13507 836 aa27.26■■□□□ 1.95
SMARCD3-203ENST00000392811 DAB2IPQ5VWQ8 1189 aa27.26■■□□□ 1.95
SMARCD3-203ENST00000392811 PLEKHA7Q6IQ23 1121 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms