RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 LACTBP83111 547 aaPredicted RBP20.26■□□□□ 0.83
CCDC50-202ENST00000392456 LAMTOR4Q0VGL1 99 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 NNTQ13423 1086 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 PPP1R7Q15435 360 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 CBWD6Q4V339 395 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 CBWD3Q5JTY5 395 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 CBWD5Q5RIA9 395 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 EFCAB12Q6NXP0 572 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 C12orf56Q8IXR9 622 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 XXYLT1Q8NBI6 393 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 DEPTORQ8TB45 409 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 ZBTB45Q96K62 511 aaPredicted RBP20.26■□□□□ 0.83
CCDC50-202ENST00000392456 LSM14BQ9BX40 385 aaKnown RBP20.26■□□□□ 0.83
CCDC50-202ENST00000392456 HAPLN2Q9GZV7 340 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 GALNT8Q9NY28 637 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 TMEM221A6NGB7 291 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 CAPN15O75808 1086 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 VIMP08670 466 aaKnown RBP20.26■□□□□ 0.83
CCDC50-202ENST00000392456 ENOX2Q16206 610 aaKnown RBP20.26■□□□□ 0.83
CCDC50-202ENST00000392456 TRPV1Q8NER1 839 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 PREBQ9HCU5 417 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 NLRC4Q9NPP4 1024 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 LRRN2O75325 713 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 C22orf31O95567 290 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 FECHP22830 423 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 FIGNQ5HY92 759 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 C1orf220Q5T0J3 134 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 RHPN2Q8IUC4 686 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 RETREG2Q8NC44 543 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 CCT6BQ92526 530 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 BAP1Q92560 729 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 SUCLA2Q9P2R7 463 aaPredicted RBP20.25■□□□□ 0.83
CCDC50-202ENST00000392456 K7ERI5 159 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 PENKP01210 267 aaPredicted RBP20.25■□□□□ 0.83
CCDC50-202ENST00000392456 HOXD8P13378 290 aaPredicted RBP20.25■□□□□ 0.83
CCDC50-202ENST00000392456 DESP17661 470 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 KLRC1P26715 233 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 BFSP1Q12934 665 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 BYSLQ13895 437 aaKnown RBP20.25■□□□□ 0.83
CCDC50-202ENST00000392456 IER5Q5VY09 327 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 TRAPPC11Q7Z392 1133 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 RNF149Q8NC42 400 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 ZNF784Q8NCA9 323 aaPredicted RBP20.25■□□□□ 0.83
CCDC50-202ENST00000392456 TMEM174Q8WUU8 243 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 SOCS4Q8WXH5 440 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 CCDC51Q96ER9 411 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 FAM84AQ96KN4 292 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 PPP1R16BQ96T49 567 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 MMS19Q96T76 1030 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 TARS2Q9BW92 718 aaKnown RBP20.25■□□□□ 0.83
CCDC50-202ENST00000392456 OCEL1Q9H607 264 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 ATXN10Q9UBB4 475 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 EXOC7Q9UPT5 735 aa20.25■□□□□ 0.83
CCDC50-202ENST00000392456 ADCY3O60266 1144 aa20.24■□□□□ 0.83
CCDC50-202ENST00000392456 ABL1P00519 1130 aa20.24■□□□□ 0.83
CCDC50-202ENST00000392456 FLT3LGP49771 235 aa20.24■□□□□ 0.83
CCDC50-202ENST00000392456 LBRQ14739 615 aaKnown RBP20.24■□□□□ 0.83
CCDC50-202ENST00000392456 BRDTQ58F21 947 aaPredicted RBP20.24■□□□□ 0.83
CCDC50-202ENST00000392456 TLK2Q86UE8 772 aa20.24■□□□□ 0.83
CCDC50-202ENST00000392456 POMGNT1Q8WZA1 660 aa20.24■□□□□ 0.83
CCDC50-202ENST00000392456 RUFY1Q96T51 708 aa20.24■□□□□ 0.83
CCDC50-202ENST00000392456 A6NJR5 290 aa20.24■□□□□ 0.83
CCDC50-202ENST00000392456 PON1P27169 355 aa20.24■□□□□ 0.83
CCDC50-202ENST00000392456 TUBP50607 506 aa20.24■□□□□ 0.83
CCDC50-202ENST00000392456 BEX3Q00994 111 aa20.24■□□□□ 0.83
CCDC50-202ENST00000392456 TRIM32Q13049 653 aa20.24■□□□□ 0.83
CCDC50-202ENST00000392456 DGKDQ16760 1214 aa20.24■□□□□ 0.83
CCDC50-202ENST00000392456 KCTD16Q68DU8 428 aa20.24■□□□□ 0.83
CCDC50-202ENST00000392456 LCA5Q86VQ0 697 aa20.24■□□□□ 0.83
CCDC50-202ENST00000392456 PSPC1Q8WXF1 523 aaKnown RBP20.24■□□□□ 0.83
CCDC50-202ENST00000392456 TRIB2Q92519 343 aa20.24■□□□□ 0.83
CCDC50-202ENST00000392456 WDR37Q9Y2I8 494 aa20.24■□□□□ 0.83
CCDC50-202ENST00000392456 CSDE1O75534 798 aaKnown RBP20.23■□□□□ 0.83
CCDC50-202ENST00000392456 CCNG1P51959 295 aa20.23■□□□□ 0.83
CCDC50-202ENST00000392456 POLR2FP61218 127 aaKnown RBP20.23■□□□□ 0.83
CCDC50-202ENST00000392456 PRKCZQ05513 592 aa20.23■□□□□ 0.83
CCDC50-202ENST00000392456 PPP3CAQ08209 521 aa20.23■□□□□ 0.83
CCDC50-202ENST00000392456 SGSM1Q2NKQ1 1148 aa20.23■□□□□ 0.83
CCDC50-202ENST00000392456 MARCH8Q5T0T0 291 aa20.23■□□□□ 0.83
CCDC50-202ENST00000392456 RRAGAQ7L523 313 aa20.23■□□□□ 0.83
CCDC50-202ENST00000392456 RPGRIP1Q96KN7 1286 aa20.23■□□□□ 0.83
CCDC50-202ENST00000392456 NLRP4Q96MN2 994 aa20.23■□□□□ 0.83
CCDC50-202ENST00000392456 POP1Q99575 1024 aaKnown RBP20.23■□□□□ 0.83
CCDC50-202ENST00000392456 A0A1W2PQJ5 194 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 LRRC53A6NM62 1247 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 PLEKP08567 350 aaPredicted RBP20.22■□□□□ 0.83
CCDC50-202ENST00000392456 NR1D1P20393 614 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 FMO5P49326 533 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 TMED1Q13445 227 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 SNRNP35Q16560 246 aaKnown RBP20.22■□□□□ 0.83
CCDC50-202ENST00000392456 GJB7Q6PEY0 223 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 SMYD1Q8NB12 490 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 TSEN2Q8NCE0 465 aaKnown RBP20.22■□□□□ 0.83
CCDC50-202ENST00000392456 CREBZFQ9NS37 354 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 AJAP1Q9UKB5 411 aaPredicted RBP20.22■□□□□ 0.83
CCDC50-202ENST00000392456 GMEB1Q9Y692 573 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 HSF2BPO75031 334 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 ATP2C2O75185 946 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 TRPA1O75762 1119 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 FCGRTP55899 365 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms