RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 POLR2BP30876 1174 aaKnown RBP27.4■■□□□ 1.98
HOMER3-202ENST00000392351 MCCD1P59942 119 aaPredicted RBP27.4■■□□□ 1.98
HOMER3-202ENST00000392351 PLCB3Q01970 1234 aa27.4■■□□□ 1.98
HOMER3-202ENST00000392351 KRT17Q04695 432 aa27.4■■□□□ 1.98
HOMER3-202ENST00000392351 BIRC3Q13489 604 aa27.4■■□□□ 1.98
HOMER3-202ENST00000392351 GPM6BQ13491 265 aa27.4■■□□□ 1.98
HOMER3-202ENST00000392351 FAM114A1Q8IWE2 563 aa27.4■■□□□ 1.98
HOMER3-202ENST00000392351 SIX4Q9UIU6 781 aa27.4■■□□□ 1.98
HOMER3-202ENST00000392351 PIRO00625 290 aa27.39■■□□□ 1.98
HOMER3-202ENST00000392351 GCLMP48507 274 aa27.39■■□□□ 1.98
HOMER3-202ENST00000392351 PPP3CAQ08209 521 aa27.39■■□□□ 1.98
HOMER3-202ENST00000392351 TDRD10Q5VZ19 366 aaKnown RBP27.39■■□□□ 1.98
HOMER3-202ENST00000392351 SCARA3Q6AZY7 606 aa27.39■■□□□ 1.98
HOMER3-202ENST00000392351 CXorf38Q8TB03 319 aa27.39■■□□□ 1.98
HOMER3-202ENST00000392351 SLC35C1Q96A29 364 aa27.39■■□□□ 1.98
HOMER3-202ENST00000392351 FAM161BQ96MY7 647 aa27.39■■□□□ 1.98
HOMER3-202ENST00000392351 AGAP1Q9UPQ3 857 aa27.39■■□□□ 1.98
HOMER3-202ENST00000392351 NUB1Q9Y5A7 615 aa27.39■■□□□ 1.98
HOMER3-202ENST00000392351 FXR1P51114 621 aaKnown RBP eCLIP27.39■■□□□ 1.97
HOMER3-202ENST00000392351 GPR153Q6NV75 609 aa27.39■■□□□ 1.97
HOMER3-202ENST00000392351 LRSAM1Q6UWE0 723 aa27.39■■□□□ 1.97
HOMER3-202ENST00000392351 CD300LGQ6UXG3 332 aa27.39■■□□□ 1.97
HOMER3-202ENST00000392351 TRIM59Q8IWR1 403 aa27.39■■□□□ 1.97
HOMER3-202ENST00000392351 FANCLQ9NW38 375 aa27.39■■□□□ 1.97
HOMER3-202ENST00000392351 MAGEC2Q9UBF1 373 aaPredicted RBP27.39■■□□□ 1.97
HOMER3-202ENST00000392351 R3HCC1Q9Y3T6 440 aaKnown RBP27.39■■□□□ 1.97
HOMER3-202ENST00000392351 SF3B1O75533 1304 aaKnown RBP eCLIP27.38■■□□□ 1.97
HOMER3-202ENST00000392351 RFXAPO00287 272 aa27.38■■□□□ 1.97
HOMER3-202ENST00000392351 STX10O60499 249 aa27.38■■□□□ 1.97
HOMER3-202ENST00000392351 PHACTR2O75167 634 aa27.38■■□□□ 1.97
HOMER3-202ENST00000392351 C4BPAP04003 597 aaKnown RBP27.38■■□□□ 1.97
HOMER3-202ENST00000392351 RBP5P82980 135 aa27.38■■□□□ 1.97
HOMER3-202ENST00000392351 ZACNQ401N2 412 aa27.38■■□□□ 1.97
HOMER3-202ENST00000392351 FUT10Q6P4F1 479 aa27.38■■□□□ 1.97
HOMER3-202ENST00000392351 SV2AQ7L0J3 742 aa27.38■■□□□ 1.97
HOMER3-202ENST00000392351 SPPL3Q8TCT6 385 aa27.38■■□□□ 1.97
HOMER3-202ENST00000392351 VN1R3Q9BXE9 311 aa27.38■■□□□ 1.97
HOMER3-202ENST00000392351 PRDM12Q9H4Q4 367 aa27.38■■□□□ 1.97
HOMER3-202ENST00000392351 VWA8A3KMH1 1905 aa27.38■■□□□ 1.97
HOMER3-202ENST00000392351 ATG2AQ2TAZ0 1938 aa27.38■■□□□ 1.97
HOMER3-202ENST00000392351 GRM6O15303 877 aa27.37■■□□□ 1.97
HOMER3-202ENST00000392351 CAVIN2O95810 425 aa27.37■■□□□ 1.97
HOMER3-202ENST00000392351 GTF2H1P32780 548 aa27.37■■□□□ 1.97
HOMER3-202ENST00000392351 BRCC3P46736 316 aa27.37■■□□□ 1.97
HOMER3-202ENST00000392351 GRIN2CQ14957 1233 aa27.37■■□□□ 1.97
HOMER3-202ENST00000392351 NCAPHQ15003 741 aa27.37■■□□□ 1.97
HOMER3-202ENST00000392351 DDX53Q86TM3 631 aaKnown RBP27.37■■□□□ 1.97
HOMER3-202ENST00000392351 DHX40Q8IX18 779 aaKnown RBP27.37■■□□□ 1.97
HOMER3-202ENST00000392351 ZNF560Q96MR9 790 aa27.37■■□□□ 1.97
HOMER3-202ENST00000392351 GPR62Q9BZJ7 368 aa27.37■■□□□ 1.97
HOMER3-202ENST00000392351 TMEM8AQ9HCN3 771 aa27.37■■□□□ 1.97
HOMER3-202ENST00000392351 PUF60Q9UHX1 559 aaKnown RBP27.37■■□□□ 1.97
HOMER3-202ENST00000392351 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.37■■□□□ 1.97
HOMER3-202ENST00000392351 MTIF2P46199 727 aaKnown RBP27.36■■□□□ 1.97
HOMER3-202ENST00000392351 LILRA4P59901 499 aa27.36■■□□□ 1.97
HOMER3-202ENST00000392351 TRPC3Q13507 836 aa27.36■■□□□ 1.97
HOMER3-202ENST00000392351 C15orf39Q6ZRI6 1047 aa27.36■■□□□ 1.97
HOMER3-202ENST00000392351 POF1BQ8WVV4 589 aa27.36■■□□□ 1.97
HOMER3-202ENST00000392351 TSPY26PQ9H489 355 aa27.36■■□□□ 1.97
HOMER3-202ENST00000392351 LZTS1Q9Y250 596 aa27.36■■□□□ 1.97
HOMER3-202ENST00000392351 MYO7AQ13402 2215 aa27.36■■□□□ 1.97
HOMER3-202ENST00000392351 KCNJ18B7U540 433 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 I3L4J1 428 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 CSPG5O95196 566 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 CST3P01034 146 aaPredicted RBP27.35■■□□□ 1.97
HOMER3-202ENST00000392351 TAF6P49848 677 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 MXI1P50539 228 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 UBE3AQ05086 875 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 KCNJ12Q14500 433 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 CDKAL1Q5VV42 579 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 KRT39Q6A163 491 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 Q7L0L9 218 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 LRRC52Q8N7C0 313 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 CBX8Q9HC52 389 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 SMTNL1A8MU46 457 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 BECN2A8MW95 431 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 TRAPPC3O43617 180 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 VNN1O95497 513 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 EFEMP2O95967 443 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 DNAJB1P25685 340 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 PNPLA4P41247 253 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 ZNF445P59923 1031 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 CBWD6Q4V339 395 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 CBWD3Q5JTY5 395 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 CBWD5Q5RIA9 395 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 VPS52Q8N1B4 723 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 STK39Q9UEW8 545 aa27.35■■□□□ 1.97
HOMER3-202ENST00000392351 SPTLC1O15269 473 aa27.34■■□□□ 1.97
HOMER3-202ENST00000392351 LPXNO60711 386 aa27.34■■□□□ 1.97
HOMER3-202ENST00000392351 PIK3CAP42336 1068 aa27.34■■□□□ 1.97
HOMER3-202ENST00000392351 ELAVL2Q12926 359 aaKnown RBP27.34■■□□□ 1.97
HOMER3-202ENST00000392351 NCOA4Q13772 614 aa27.34■■□□□ 1.97
HOMER3-202ENST00000392351 IQCB1Q15051 598 aa27.34■■□□□ 1.97
HOMER3-202ENST00000392351 SV2CQ496J9 727 aa27.34■■□□□ 1.97
HOMER3-202ENST00000392351 TIGD5Q53EQ6 642 aa27.34■■□□□ 1.97
HOMER3-202ENST00000392351 TCP11X2Q5H9J9 407 aa27.34■■□□□ 1.97
HOMER3-202ENST00000392351 TAS1R1Q7RTX1 841 aa27.34■■□□□ 1.97
HOMER3-202ENST00000392351 RNF168Q8IYW5 571 aaPredicted RBP27.34■■□□□ 1.97
HOMER3-202ENST00000392351 HPDLQ96IR7 371 aa27.34■■□□□ 1.97
HOMER3-202ENST00000392351 TLR9Q9NR96 1032 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms