RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 HNRNPCP07910 306 aaKnown RBP eCLIP2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 FCER1AP12319 257 aa2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 FPR1P21462 350 aa2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 FLT3P36888 993 aa2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 MMP13P45452 471 aa2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 HNRNPMP52272 730 aaKnown RBP eCLIP2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 PHC1P78364 1004 aa2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 TERF2Q15554 542 aa2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 C2orf27AQ580R0 203 aa2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 ATG9BQ674R7 924 aa2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 OTUD7BQ6GQQ9 843 aa2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 KRT78Q8N1N4 520 aa2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 CAMKK1Q8N5S9 505 aa2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 NUP133Q8WUM0 1156 aa2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 RIN2Q8WYP3 895 aaPredicted RBP2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 PGBD1Q96JS3 809 aa2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 MARK4Q96L34 752 aa2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 WNT8AQ9H1J5 351 aa2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 KCTD10Q9H3F6 313 aa2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 LDAHQ9H6V9 325 aa2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 TUBA8Q9NY65 449 aaPredicted RBP2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 ZNF112Q9UJU3 913 aa2.25□□□□□ -2.05
RNU6-239P-201ENST00000390990 SMIM35A0A1B0GVV1 85 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 MYMKA6NI61 221 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 KRTAP9-6A8MVA2 160 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 KCNU1A8MYU2 1149 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 GCOM1H8Y6P7 765 aaPredicted RBP2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 GAS7O60861 476 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 IL2RBP14784 551 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 DRD4P21917 467 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 LSP1P33241 339 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 GUCY1A2P33402 732 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 HYAL1Q12794 435 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 LRRC41Q15345 812 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 CD300EQ496F6 205 aaPredicted RBP2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 CT83Q5H943 113 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 Q6ZTC4 211 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 IRF2BP2Q7Z5L9 587 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 PQLC1Q8N2U9 271 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 SYNPOQ8N3V7 929 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 LILRB2Q8N423 598 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 FITM2Q8N6M3 262 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 GPR156Q8NFN8 814 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 TMEM79Q9BSE2 394 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 PRSS22Q9GZN4 317 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 GSTO2Q9H4Y5 243 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 MOCS1Q9NZB8 636 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 CCDC9Q9Y3X0 531 aaKnown RBP2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 AFG3L2Q9Y4W6 797 aa2.24□□□□□ -2.05
RNU6-239P-201ENST00000390990 PRAMEF33A0A0G2JMD5 474 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 CDHR4A6H8M9 788 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 FAM83GA6ND36 823 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 KDM1AO60341 852 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 PRAMEF10O60809 474 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 TTLL1O95922 423 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 TUBB4AP04350 444 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 PPP3CBP16298 524 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 ECHS1P30084 290 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 CCT8P50990 548 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 KPNA1P52294 538 aaPredicted RBP2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 RPS7P62081 194 aaKnown RBP2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 FPGSQ05932 587 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 FRMD7Q6ZUT3 714 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 SEM1Q6ZVN7 128 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 KIF18BQ86Y91 864 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 NRACQ8N912 160 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 ACRBPQ8NEB7 543 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 TBC1D15Q8TC07 691 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 REPS1Q96D71 796 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 PAWRQ96IZ0 340 aaKnown RBP2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 SPTLC3Q9NUV7 552 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 MDFICQ9P1T7 246 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 ACTL7AQ9Y615 435 aa2.23□□□□□ -2.05
RNU6-239P-201ENST00000390990 ADGRA2Q96PE1 1338 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 TCRBV7S2A1N4TA0A589 114 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 PRRT4C9JH25 899 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 PPP1R12AO14974 1030 aaPredicted RBP2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 KPNA6O60684 536 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 URI1O94763 535 aaPredicted RBP2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 PCSK1P29120 753 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 ARHGAP25P42331 645 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 THBS3P49746 956 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 NANOS2P60321 138 aaKnown RBP2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 DAZAP2Q15038 168 aaPredicted RBP2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 PXDC1Q5TGL8 231 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 PRAMEF17Q5VTA0 474 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 CLNKQ7Z7G1 428 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 SMC1BQ8NDV3 1235 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 NSMCE1Q8WV22 266 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 HOXB13Q92826 284 aaPredicted RBP2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 RFKQ969G6 155 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 EAF2Q96CJ1 260 aaPredicted RBP2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 GPR101Q96P66 508 aaPredicted RBP2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 SRPK1Q96SB4 655 aaKnown RBP2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 UHRF1Q96T88 793 aaPredicted RBP2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 TLR10Q9BXR5 811 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 SENP6Q9GZR1 1112 aaPredicted RBP2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 KLC4Q9NSK0 619 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 TMEM260Q9NX78 707 aa2.22□□□□□ -2.05
RNU6-239P-201ENST00000390990 SH3BP4Q9P0V3 963 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms