RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 SGSM1Q2NKQ1 1148 aa19.44■□□□□ 0.7
ACTN4-202ENST00000390009 IQSEC1Q6DN90 963 aa19.44■□□□□ 0.7
ACTN4-202ENST00000390009 EMBQ6PCB8 327 aa19.44■□□□□ 0.7
ACTN4-202ENST00000390009 SND1Q7KZF4 910 aaKnown RBP eCLIP19.44■□□□□ 0.78e-20■□□□□ 9.3
ACTN4-202ENST00000390009 TMEM192Q8IY95 271 aa19.44■□□□□ 0.7
ACTN4-202ENST00000390009 CD101Q93033 1021 aa19.44■□□□□ 0.7
ACTN4-202ENST00000390009 WNT8AQ9H1J5 351 aa19.44■□□□□ 0.7
ACTN4-202ENST00000390009 RPF1Q9H9Y2 349 aaKnown RBP19.44■□□□□ 0.7
ACTN4-202ENST00000390009 CPA4Q9UI42 421 aa19.44■□□□□ 0.7
ACTN4-202ENST00000390009 GPR25O00155 361 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 ADCY6O43306 1168 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 CFHP08603 1231 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 MYBL1P10243 752 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 ZNF132P52740 706 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 HUNKP57058 714 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 PPFIA1Q13136 1202 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 TRIM72Q6ZMU5 477 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 TRIM11Q96F44 468 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 ANKRD36BP1Q96IX9 119 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 NAP1L3Q99457 506 aaPredicted RBP19.43■□□□□ 0.7
ACTN4-202ENST00000390009 NIF3L1Q9GZT8 377 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 ZCCHC17Q9NP64 241 aaKnown RBP19.43■□□□□ 0.7
ACTN4-202ENST00000390009 AVENQ9NQS1 362 aaPredicted RBP19.43■□□□□ 0.7
ACTN4-202ENST00000390009 THAP12O43422 761 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 SPOPO43791 374 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 ECM2O94769 699 aaPredicted RBP19.43■□□□□ 0.7
ACTN4-202ENST00000390009 TNNC2P02585 160 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 PEX5P50542 639 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 GRIK4Q16099 956 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 DGKDQ16760 1214 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 PASD1Q8IV76 773 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 CASKIN2Q8WXE0 1202 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 IFT81Q8WYA0 676 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 SLITRK6Q9H5Y7 841 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 SLC5A4Q9NY91 659 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 NFU1Q9UMS0 254 aa19.43■□□□□ 0.7
ACTN4-202ENST00000390009 ZEB2O60315 1214 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 IL18RAPO95256 599 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 RRM1P23921 792 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 NOMO3P69849 1222 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 PAK2Q13177 524 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 CLUL1Q15846 466 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 MARCH8Q5T0T0 291 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 MON1BQ7L1V2 547 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 CPNE8Q86YQ8 564 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 CCDC102AQ96A19 550 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 ANAPC7Q9UJX3 599 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 MCF2P10911 925 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 SSTR3P32745 418 aaPredicted RBP19.42■□□□□ 0.7
ACTN4-202ENST00000390009 CTNNA1P35221 906 aaKnown RBP19.42■□□□□ 0.7
ACTN4-202ENST00000390009 ZNF699Q32M78 642 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 C2CD6Q53TS8 623 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 AADACL2Q6P093 401 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 NLRP7Q8WX94 980 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 CAVIN3Q969G5 261 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 CPB2Q96IY4 423 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 XYLT2Q9H1B5 865 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 PDZD7Q9H5P4 517 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 AMACRQ9UHK6 382 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 NR2E1Q9Y466 385 aa19.42■□□□□ 0.7
ACTN4-202ENST00000390009 MROH7Q68CQ1 1323 aa19.41■□□□□ 0.7
ACTN4-202ENST00000390009 CCDC66A2RUB6 948 aa19.41■□□□□ 0.7
ACTN4-202ENST00000390009 STAG3L1P0CL83 205 aa19.41■□□□□ 0.7
ACTN4-202ENST00000390009 ARF4P18085 180 aaPredicted RBP19.41■□□□□ 0.7
ACTN4-202ENST00000390009 CD58P19256 250 aa19.41■□□□□ 0.7
ACTN4-202ENST00000390009 AARSP49588 968 aaKnown RBP eCLIP19.41■□□□□ 0.79e-10■■■■■ 48
ACTN4-202ENST00000390009 TNFAIP2Q03169 654 aa19.41■□□□□ 0.7
ACTN4-202ENST00000390009 TERF2Q15554 542 aa19.41■□□□□ 0.7
ACTN4-202ENST00000390009 ZNF606Q8WXB4 792 aa19.41■□□□□ 0.7
ACTN4-202ENST00000390009 CISHQ9NSE2 258 aa19.41■□□□□ 0.7
ACTN4-202ENST00000390009 CITO14578 2027 aa19.41■□□□□ 0.7
ACTN4-202ENST00000390009 IGF2BP3O00425 579 aaKnown RBP eCLIP19.4■□□□□ 0.7
ACTN4-202ENST00000390009 CTNNA2P26232 953 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 TRADDQ15628 312 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 HSP90B2PQ58FF3 399 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 MORN1Q5T089 497 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 ADAT2Q7Z6V5 191 aaKnown RBP19.4■□□□□ 0.7
ACTN4-202ENST00000390009 PHLDB2Q86SQ0 1253 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 CCDC26Q8TAB7 109 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 SCLT1Q96NL6 688 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 C11orf70Q9BRQ4 267 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 PCDHA3Q9Y5H8 950 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 GOLGA6L10A0A0M3HER8 536 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 NFICP08651 508 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 ASPAP45381 313 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 NNTQ13423 1086 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 PRAMEF19Q5SWL8 479 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 LLGL2Q6P1M3 1020 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 MAATS1Q7Z4T9 603 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 PHF13Q86YI8 300 aaPredicted RBP19.4■□□□□ 0.7
ACTN4-202ENST00000390009 TRIM7Q9C029 511 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 MED4Q9NPJ6 270 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 ADAM22Q9P0K1 906 aa19.4■□□□□ 0.7
ACTN4-202ENST00000390009 LACTBL1A8MY62 500 aa19.39■□□□□ 0.69
ACTN4-202ENST00000390009 MEFVO15553 781 aaPredicted RBP19.39■□□□□ 0.69
ACTN4-202ENST00000390009 MAP2K5Q13163 448 aa19.39■□□□□ 0.69
ACTN4-202ENST00000390009 SEL1L2Q5TEA6 688 aa19.39■□□□□ 0.69
ACTN4-202ENST00000390009 SCARA5Q6ZMJ2 495 aa19.39■□□□□ 0.69
ACTN4-202ENST00000390009 RASAL3Q86YV0 1011 aa19.39■□□□□ 0.69
ACTN4-202ENST00000390009 KIAA0319LQ8IZA0 1049 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms