RNA–Protein interactions for RNA: ENST00000389302.7

FANCA-203, Transcript of FA complementation group A, humanhuman

TSL 1 (best) BASIC

Gene FANCA, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-203ENST00000389302 BIRC3Q13489 604 aa18.2■□□□□ 0.5
FANCA-203ENST00000389302 GRIN2CQ14957 1233 aa18.2■□□□□ 0.5
FANCA-203ENST00000389302 C1orf220Q5T0J3 134 aa18.2■□□□□ 0.5
FANCA-203ENST00000389302 SCARA3Q6AZY7 606 aa18.2■□□□□ 0.5
FANCA-203ENST00000389302 C3orf58Q8NDZ4 430 aa18.2■□□□□ 0.5
FANCA-203ENST00000389302 SPPL3Q8TCT6 385 aa18.2■□□□□ 0.5
FANCA-203ENST00000389302 PRDM12Q9H4Q4 367 aa18.2■□□□□ 0.5
FANCA-203ENST00000389302 MAGEC2Q9UBF1 373 aaPredicted RBP18.2■□□□□ 0.5
FANCA-203ENST00000389302 ITGA11Q9UKX5 1188 aa18.2■□□□□ 0.5
FANCA-203ENST00000389302 ANO9A1A5B4 782 aa18.19■□□□□ 0.5
FANCA-203ENST00000389302 PIRO00625 290 aa18.19■□□□□ 0.5
FANCA-203ENST00000389302 GRM6O15303 877 aa18.19■□□□□ 0.5
FANCA-203ENST00000389302 CST3P01034 146 aaPredicted RBP18.19■□□□□ 0.5
FANCA-203ENST00000389302 C4BPAP04003 597 aaKnown RBP18.19■□□□□ 0.5
FANCA-203ENST00000389302 FXR1P51114 621 aaKnown RBP eCLIP18.19■□□□□ 0.5
FANCA-203ENST00000389302 RBP5P82980 135 aa18.19■□□□□ 0.5
FANCA-203ENST00000389302 MYL5Q02045 173 aa18.19■□□□□ 0.5
FANCA-203ENST00000389302 IRF2BP1Q8IU81 584 aa18.19■□□□□ 0.5
FANCA-203ENST00000389302 FAM114A1Q8IWE2 563 aa18.19■□□□□ 0.5
FANCA-203ENST00000389302 AOPEPQ8N6M6 819 aa18.19■□□□□ 0.5
FANCA-203ENST00000389302 GDPD5Q8WTR4 605 aa18.19■□□□□ 0.5
FANCA-203ENST00000389302 POF1BQ8WVV4 589 aa18.19■□□□□ 0.5
FANCA-203ENST00000389302 CNOT6LQ96LI5 555 aaKnown RBP18.19■□□□□ 0.5
FANCA-203ENST00000389302 FANCLQ9NW38 375 aa18.19■□□□□ 0.5
FANCA-203ENST00000389302 STX10O60499 249 aa18.18■□□□□ 0.5
FANCA-203ENST00000389302 BRCC3P46736 316 aa18.18■□□□□ 0.5
FANCA-203ENST00000389302 ENPEPQ07075 957 aa18.18■□□□□ 0.5
FANCA-203ENST00000389302 PPP3CAQ08209 521 aa18.18■□□□□ 0.5
FANCA-203ENST00000389302 TRPC3Q13507 836 aa18.18■□□□□ 0.5
FANCA-203ENST00000389302 GPR153Q6NV75 609 aa18.18■□□□□ 0.5
FANCA-203ENST00000389302 SV2AQ7L0J3 742 aa18.18■□□□□ 0.5
FANCA-203ENST00000389302 Q7L0L9 218 aa18.18■□□□□ 0.5
FANCA-203ENST00000389302 DDX53Q86TM3 631 aaKnown RBP18.18■□□□□ 0.5
FANCA-203ENST00000389302 GPR62Q9BZJ7 368 aa18.18■□□□□ 0.5
FANCA-203ENST00000389302 SIX4Q9UIU6 781 aa18.18■□□□□ 0.5
FANCA-203ENST00000389302 SMTNL1A8MU46 457 aa18.17■□□□□ 0.5
FANCA-203ENST00000389302 BECN2A8MW95 431 aa18.17■□□□□ 0.5
FANCA-203ENST00000389302 TMEM189-UBE2V1I3L0A0 370 aa18.17■□□□□ 0.5
FANCA-203ENST00000389302 I3L4J1 428 aa18.17■□□□□ 0.5
FANCA-203ENST00000389302 TRAPPC3O43617 180 aa18.17■□□□□ 0.5
FANCA-203ENST00000389302 MTIF2P46199 727 aaKnown RBP18.17■□□□□ 0.5
FANCA-203ENST00000389302 MRE11P49959 708 aa18.17■□□□□ 0.5
FANCA-203ENST00000389302 MARSP56192 900 aaKnown RBP18.17■□□□□ 0.5
FANCA-203ENST00000389302 LILRA4P59901 499 aa18.17■□□□□ 0.5
FANCA-203ENST00000389302 TDRD10Q5VZ19 366 aaKnown RBP18.17■□□□□ 0.5
FANCA-203ENST00000389302 FUT10Q6P4F1 479 aa18.17■□□□□ 0.5
FANCA-203ENST00000389302 CD300LGQ6UXG3 332 aa18.17■□□□□ 0.5
FANCA-203ENST00000389302 TAS1R1Q7RTX1 841 aa18.17■□□□□ 0.5
FANCA-203ENST00000389302 CEP57Q86XR8 500 aa18.17■□□□□ 0.5
FANCA-203ENST00000389302 VPS52Q8N1B4 723 aa18.17■□□□□ 0.5
FANCA-203ENST00000389302 MICAL1Q8TDZ2 1067 aa18.17■□□□□ 0.5
FANCA-203ENST00000389302 SLC35C1Q96A29 364 aa18.17■□□□□ 0.5
FANCA-203ENST00000389302 BPIFA3Q9BQP9 254 aa18.17■□□□□ 0.5
FANCA-203ENST00000389302 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.17■□□□□ 0.5
FANCA-203ENST00000389302 SF3B1O75533 1304 aaKnown RBP eCLIP18.17■□□□□ 0.52e-7■■■■■ 59.9
FANCA-203ENST00000389302 CLSTN1O94985 981 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 DNAJB1P25685 340 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 TAF6P49848 677 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 MCCD1P59942 119 aaPredicted RBP18.16■□□□□ 0.5
FANCA-203ENST00000389302 UBE3AQ05086 875 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 TIGD5Q53EQ6 642 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 FAM171A1Q5VUB5 890 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 DSTYKQ6XUX3 929 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 TRIM59Q8IWR1 403 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 DEFB123Q8N688 67 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 CXorf38Q8TB03 319 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 TMEM8AQ9HCN3 771 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 LZTS1Q9Y250 596 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 KCNJ18B7U540 433 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 CDK11BP21127 795 aaKnown RBP18.16■□□□□ 0.5
FANCA-203ENST00000389302 GTF2H1P32780 548 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 CA8P35219 290 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 PNPLA4P41247 253 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 KCNH2Q12809 1159 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 MYO1EQ12965 1108 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 KCNJ12Q14500 433 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 ZACNQ401N2 412 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 KRT39Q6A163 491 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 KIAA1841Q6NSI8 718 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 TMC7Q7Z402 723 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 DHX40Q8IX18 779 aaKnown RBP18.16■□□□□ 0.5
FANCA-203ENST00000389302 HPDLQ96IR7 371 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 B3GALT6Q96L58 329 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 ZNF560Q96MR9 790 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 VN1R3Q9BXE9 311 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 GRPEL1Q9HAV7 217 aa18.16■□□□□ 0.5
FANCA-203ENST00000389302 KPNA7A9QM74 516 aa18.15■□□□□ 0.5
FANCA-203ENST00000389302 SPTLC1O15269 473 aa18.15■□□□□ 0.5
FANCA-203ENST00000389302 LPXNO60711 386 aa18.15■□□□□ 0.5
FANCA-203ENST00000389302 CAVIN2O95810 425 aa18.15■□□□□ 0.5
FANCA-203ENST00000389302 SOD2P04179 222 aa18.15■□□□□ 0.5
FANCA-203ENST00000389302 ERVFC1P60507 584 aa18.15■□□□□ 0.5
FANCA-203ENST00000389302 MYL6P60660 151 aa18.15■□□□□ 0.5
FANCA-203ENST00000389302 ELAVL2Q12926 359 aaKnown RBP18.15■□□□□ 0.5
FANCA-203ENST00000389302 NCOA4Q13772 614 aa18.15■□□□□ 0.5
FANCA-203ENST00000389302 BMS1Q14692 1282 aaKnown RBP18.15■□□□□ 0.5
FANCA-203ENST00000389302 NCAPHQ15003 741 aa18.15■□□□□ 0.5
FANCA-203ENST00000389302 SV2CQ496J9 727 aa18.15■□□□□ 0.5
FANCA-203ENST00000389302 TCP11X2Q5H9J9 407 aa18.15■□□□□ 0.5
FANCA-203ENST00000389302 LRRC52Q8N7C0 313 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms