RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 TMEM265A0A087WTH1 108 aa16.69■□□□□ 0.26
PDGFB-202ENST00000381551 KCNJ18B7U540 433 aa16.69■□□□□ 0.26
PDGFB-202ENST00000381551 TMEM189-UBE2V1I3L0A0 370 aa16.69■□□□□ 0.26
PDGFB-202ENST00000381551 PPEF2O14830 753 aa16.69■□□□□ 0.26
PDGFB-202ENST00000381551 STX10O60499 249 aa16.69■□□□□ 0.26
PDGFB-202ENST00000381551 TADA2AO75478 443 aa16.69■□□□□ 0.26
PDGFB-202ENST00000381551 FGF18O76093 207 aa16.69■□□□□ 0.26
PDGFB-202ENST00000381551 KIF4AO95239 1232 aa16.69■□□□□ 0.26
PDGFB-202ENST00000381551 EEF1GP26641 437 aaKnown RBP16.69■□□□□ 0.26
PDGFB-202ENST00000381551 PPM1AP35813 382 aa16.69■□□□□ 0.26
PDGFB-202ENST00000381551 KCNJ12Q14500 433 aa16.69■□□□□ 0.26
PDGFB-202ENST00000381551 ZACNQ401N2 412 aa16.69■□□□□ 0.26
PDGFB-202ENST00000381551 TCP11X2Q5H9J9 407 aa16.69■□□□□ 0.26
PDGFB-202ENST00000381551 DCAF17Q5H9S7 520 aaPredicted RBP16.69■□□□□ 0.26
PDGFB-202ENST00000381551 TCERG1LQ5VWI1 586 aa16.69■□□□□ 0.26
PDGFB-202ENST00000381551 TDRD10Q5VZ19 366 aaKnown RBP16.69■□□□□ 0.26
PDGFB-202ENST00000381551 ARNTL2Q8WYA1 636 aa16.69■□□□□ 0.26
PDGFB-202ENST00000381551 TTYH1Q9H313 450 aaPredicted RBP16.69■□□□□ 0.26
PDGFB-202ENST00000381551 MAGEC2Q9UBF1 373 aaPredicted RBP16.69■□□□□ 0.26
PDGFB-202ENST00000381551 ADAM28Q9UKQ2 775 aa16.69■□□□□ 0.26
PDGFB-202ENST00000381551 KIAA1671Q9BY89 1806 aa16.68■□□□□ 0.26
PDGFB-202ENST00000381551 BECN2A8MW95 431 aa16.68■□□□□ 0.26
PDGFB-202ENST00000381551 H3BNC9 293 aa16.68■□□□□ 0.26
PDGFB-202ENST00000381551 KRT19P08727 400 aa16.68■□□□□ 0.26
PDGFB-202ENST00000381551 ZNF18P17022 549 aa16.68■□□□□ 0.26
PDGFB-202ENST00000381551 POLR2BP30876 1174 aaKnown RBP16.68■□□□□ 0.26
PDGFB-202ENST00000381551 LILRA4P59901 499 aa16.68■□□□□ 0.26
PDGFB-202ENST00000381551 KRT17Q04695 432 aa16.68■□□□□ 0.26
PDGFB-202ENST00000381551 KCNH2Q12809 1159 aa16.68■□□□□ 0.26
PDGFB-202ENST00000381551 KRT39Q6A163 491 aa16.68■□□□□ 0.26
PDGFB-202ENST00000381551 DDX53Q86TM3 631 aaKnown RBP16.68■□□□□ 0.26
PDGFB-202ENST00000381551 FBXO22Q8NEZ5 403 aa16.68■□□□□ 0.26
PDGFB-202ENST00000381551 FAM200AQ8TCP9 573 aa16.68■□□□□ 0.26
PDGFB-202ENST00000381551 SPPL3Q8TCT6 385 aa16.68■□□□□ 0.26
PDGFB-202ENST00000381551 TMEM169Q96HH4 297 aa16.68■□□□□ 0.26
PDGFB-202ENST00000381551 C11orf84Q9BUA3 381 aaPredicted RBP16.68■□□□□ 0.26
PDGFB-202ENST00000381551 VN1R3Q9BXE9 311 aa16.68■□□□□ 0.26
PDGFB-202ENST00000381551 TMEM8AQ9HCN3 771 aa16.68■□□□□ 0.26
PDGFB-202ENST00000381551 ALG13Q9NP73 1137 aaKnown RBP16.68■□□□□ 0.26
PDGFB-202ENST00000381551 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.68■□□□□ 0.26
PDGFB-202ENST00000381551 CHD7Q9P2D1 2997 aa16.68■□□□□ 0.26
PDGFB-202ENST00000381551 EPOPA6NHQ4 379 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 LRRC10BA6NIK2 292 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 SPTLC1O15269 473 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 PMM2O15305 246 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 PHACTR2O75167 634 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 VNN1O95497 513 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 PAX3P23760 479 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 MTIF2P46199 727 aaKnown RBP16.67■□□□□ 0.26
PDGFB-202ENST00000381551 FMO5P49326 533 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 BIRC3Q13489 604 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 GPM6BQ13491 265 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 CBWD6Q4V339 395 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 TIGD5Q53EQ6 642 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 CBWD3Q5JTY5 395 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 CBWD5Q5RIA9 395 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 GPR153Q6NV75 609 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 LUZP1Q86V48 1076 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 RNF168Q8IYW5 571 aaPredicted RBP16.67■□□□□ 0.26
PDGFB-202ENST00000381551 LRRC52Q8N7C0 313 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 HASPINQ8TF76 798 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 TUBGCP2Q9BSJ2 902 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 GPR62Q9BZJ7 368 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 MMRN2Q9H8L6 949 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 NUB1Q9Y5A7 615 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 NLRC5Q86WI3 1866 aa16.67■□□□□ 0.26
PDGFB-202ENST00000381551 RFXAPO00287 272 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 GRM6O15303 877 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 TRAPPC3O43617 180 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 AFPP02771 609 aaKnown RBP16.66■□□□□ 0.26
PDGFB-202ENST00000381551 DNAJB1P25685 340 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 PNPLA4P41247 253 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 BRCC3P46736 316 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 AARSP49588 968 aaKnown RBP eCLIP16.66■□□□□ 0.26
PDGFB-202ENST00000381551 MXI1P50539 228 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 MYL6P60660 151 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 UBE3AQ05086 875 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 TRPC3Q13507 836 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 NCOA4Q13772 614 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 CAMK1Q14012 370 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 SGSM1Q2NKQ1 1148 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 FUT10Q6P4F1 479 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 TAS1R1Q7RTX1 841 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 TAS1R2Q8TE23 839 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 HPDLQ96IR7 371 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 ANP32EQ9BTT0 268 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 PUF60Q9UHX1 559 aaKnown RBP16.66■□□□□ 0.26
PDGFB-202ENST00000381551 LZTS1Q9Y250 596 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 COQ4Q9Y3A0 265 aa16.66■□□□□ 0.26
PDGFB-202ENST00000381551 R3HCC1Q9Y3T6 440 aaKnown RBP16.66■□□□□ 0.26
PDGFB-202ENST00000381551 SCN1AP35498 2009 aa16.65■□□□□ 0.26
PDGFB-202ENST00000381551 KPNA7A9QM74 516 aa16.65■□□□□ 0.26
PDGFB-202ENST00000381551 I3L4J1 428 aa16.65■□□□□ 0.26
PDGFB-202ENST00000381551 LPXNO60711 386 aa16.65■□□□□ 0.26
PDGFB-202ENST00000381551 STAU1O95793 577 aaKnown RBP16.65■□□□□ 0.26
PDGFB-202ENST00000381551 HLA-DRAP01903 254 aa16.65■□□□□ 0.26
PDGFB-202ENST00000381551 ATP1A3P13637 1013 aa16.65■□□□□ 0.26
PDGFB-202ENST00000381551 CDK11BP21127 795 aaKnown RBP16.65■□□□□ 0.26
PDGFB-202ENST00000381551 ATICP31939 592 aa16.65■□□□□ 0.26
PDGFB-202ENST00000381551 TAF6P49848 677 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms