RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 SNX29Q8TEQ0 813 aa17.5■□□□□ 0.39
VCX3A-201ENST00000381089 DEPDC1BQ8WUY9 529 aa17.5■□□□□ 0.39
VCX3A-201ENST00000381089 SMARCD2Q92925 531 aa17.5■□□□□ 0.39
VCX3A-201ENST00000381089 ASB16Q96NS5 453 aa17.5■□□□□ 0.39
VCX3A-201ENST00000381089 KCNG1Q9UIX4 513 aa17.5■□□□□ 0.39
VCX3A-201ENST00000381089 FBXL5Q9UKA1 691 aa17.5■□□□□ 0.39
VCX3A-201ENST00000381089 FCARP24071 287 aa17.49■□□□□ 0.39
VCX3A-201ENST00000381089 MARCKSP29966 332 aaPredicted RBP17.49■□□□□ 0.39
VCX3A-201ENST00000381089 MCM4P33991 863 aa17.49■□□□□ 0.39
VCX3A-201ENST00000381089 CCR3P51677 355 aa17.49■□□□□ 0.39
VCX3A-201ENST00000381089 STRN3Q13033 797 aa17.49■□□□□ 0.39
VCX3A-201ENST00000381089 KRT79Q5XKE5 535 aa17.49■□□□□ 0.39
VCX3A-201ENST00000381089 TSSK4Q6SA08 328 aa17.49■□□□□ 0.39
VCX3A-201ENST00000381089 MPZL3Q6UWV2 235 aa17.49■□□□□ 0.39
VCX3A-201ENST00000381089 FAM3CQ92520 227 aa17.49■□□□□ 0.39
VCX3A-201ENST00000381089 TCEAL4Q96EI5 215 aa17.49■□□□□ 0.39
VCX3A-201ENST00000381089 SUSD3Q96L08 255 aa17.49■□□□□ 0.39
VCX3A-201ENST00000381089 TARS2Q9BW92 718 aaKnown RBP17.49■□□□□ 0.39
VCX3A-201ENST00000381089 GPR88Q9GZN0 384 aa17.49■□□□□ 0.39
VCX3A-201ENST00000381089 CHRDQ9H2X0 955 aa17.49■□□□□ 0.39
VCX3A-201ENST00000381089 C17orf75Q9HAS0 396 aa17.49■□□□□ 0.39
VCX3A-201ENST00000381089 PTPRHQ9HD43 1115 aa17.49■□□□□ 0.39
VCX3A-201ENST00000381089 TRPV5Q9NQA5 729 aa17.49■□□□□ 0.39
VCX3A-201ENST00000381089 ASAH2Q9NR71 780 aa17.49■□□□□ 0.39
VCX3A-201ENST00000381089 CNTN3Q9P232 1028 aa17.49■□□□□ 0.39
VCX3A-201ENST00000381089 AFF4Q9UHB7 1163 aaKnown RBP17.49■□□□□ 0.39
VCX3A-201ENST00000381089 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.49■□□□□ 0.39
VCX3A-201ENST00000381089 NCOR2Q9Y618 2525 aa17.49■□□□□ 0.39
VCX3A-201ENST00000381089 ZNF263O14978 683 aa17.48■□□□□ 0.39
VCX3A-201ENST00000381089 HIP1RO75146 1068 aa17.48■□□□□ 0.39
VCX3A-201ENST00000381089 HARSP12081 509 aaKnown RBP17.48■□□□□ 0.39
VCX3A-201ENST00000381089 CPB1P15086 417 aa17.48■□□□□ 0.39
VCX3A-201ENST00000381089 GDI1P31150 447 aa17.48■□□□□ 0.39
VCX3A-201ENST00000381089 MRPL58Q14197 206 aaKnown RBP17.48■□□□□ 0.39
VCX3A-201ENST00000381089 ECM1Q16610 540 aa17.48■□□□□ 0.39
VCX3A-201ENST00000381089 C1orf228Q6PIY5 440 aa17.48■□□□□ 0.39
VCX3A-201ENST00000381089 MAMSTRQ6ZN01 415 aa17.48■□□□□ 0.39
VCX3A-201ENST00000381089 FAM184AQ8NB25 1140 aa17.48■□□□□ 0.39
VCX3A-201ENST00000381089 E2F7Q96AV8 911 aa17.48■□□□□ 0.39
VCX3A-201ENST00000381089 MSANTD3Q96H12 275 aa17.48■□□□□ 0.39
VCX3A-201ENST00000381089 ZMAT2Q96NC0 199 aaKnown RBP17.48■□□□□ 0.39
VCX3A-201ENST00000381089 LLPHQ9BRT6 129 aaKnown RBP17.48■□□□□ 0.39
VCX3A-201ENST00000381089 TIPINQ9BVW5 301 aa17.48■□□□□ 0.39
VCX3A-201ENST00000381089 OXCT2Q9BYC2 517 aaPredicted RBP17.48■□□□□ 0.39
VCX3A-201ENST00000381089 SLITRK6Q9H5Y7 841 aa17.48■□□□□ 0.39
VCX3A-201ENST00000381089 ZNF334Q9HCZ1 680 aaPredicted RBP17.48■□□□□ 0.39
VCX3A-201ENST00000381089 ARHGAP28Q9P2N2 729 aa17.48■□□□□ 0.39
VCX3A-201ENST00000381089 PIAS3Q9Y6X2 628 aa17.48■□□□□ 0.39
VCX3A-201ENST00000381089 CITO14578 2027 aa17.48■□□□□ 0.39
VCX3A-201ENST00000381089 F5P12259 2224 aa17.47■□□□□ 0.39
VCX3A-201ENST00000381089 SEC24AO95486 1093 aa17.47■□□□□ 0.39
VCX3A-201ENST00000381089 MYL4P12829 197 aa17.47■□□□□ 0.39
VCX3A-201ENST00000381089 HMGN5P82970 282 aaKnown RBP17.47■□□□□ 0.39
VCX3A-201ENST00000381089 TWF1Q12792 350 aa17.47■□□□□ 0.39
VCX3A-201ENST00000381089 PLD1Q13393 1074 aa17.47■□□□□ 0.39
VCX3A-201ENST00000381089 FZD5Q13467 585 aa17.47■□□□□ 0.39
VCX3A-201ENST00000381089 YAF2Q8IY57 180 aa17.47■□□□□ 0.39
VCX3A-201ENST00000381089 CELF5Q8N6W0 485 aaKnown RBP17.47■□□□□ 0.39
VCX3A-201ENST00000381089 CSGALNACT1Q8TDX6 532 aa17.47■□□□□ 0.39
VCX3A-201ENST00000381089 DDX12PQ92771 950 aa17.47■□□□□ 0.39
VCX3A-201ENST00000381089 RTKNQ9BST9 563 aa17.47■□□□□ 0.39
VCX3A-201ENST00000381089 PROZP22891 400 aa17.46■□□□□ 0.39
VCX3A-201ENST00000381089 CCR2P41597 374 aa17.46■□□□□ 0.39
VCX3A-201ENST00000381089 SMTNP53814 917 aa17.46■□□□□ 0.39
VCX3A-201ENST00000381089 ATXN1P54253 815 aaKnown RBP17.46■□□□□ 0.39
VCX3A-201ENST00000381089 NOLC1Q14978 699 aaKnown RBP eCLIP17.46■□□□□ 0.39
VCX3A-201ENST00000381089 LAIR1Q6GTX8 287 aa17.46■□□□□ 0.39
VCX3A-201ENST00000381089 VITQ6UXI7 678 aa17.46■□□□□ 0.39
VCX3A-201ENST00000381089 MAP4K3Q8IVH8 894 aa17.46■□□□□ 0.39
VCX3A-201ENST00000381089 CCDC83Q8IWF9 413 aa17.46■□□□□ 0.39
VCX3A-201ENST00000381089 IGSF22Q8N9C0 903 aa17.46■□□□□ 0.39
VCX3A-201ENST00000381089 FBXO18Q8NFZ0 1043 aa17.46■□□□□ 0.39
VCX3A-201ENST00000381089 ZSCAN18Q8TBC5 510 aaPredicted RBP17.46■□□□□ 0.39
VCX3A-201ENST00000381089 C18orf25Q96B23 403 aaPredicted RBP17.46■□□□□ 0.39
VCX3A-201ENST00000381089 TBC1D32Q96NH3 1257 aa17.46■□□□□ 0.39
VCX3A-201ENST00000381089 LMAN1LQ9HAT1 526 aa17.46■□□□□ 0.39
VCX3A-201ENST00000381089 ANKFY1Q9P2R3 1169 aa17.46■□□□□ 0.39
VCX3A-201ENST00000381089 PCDHB8Q9UN66 801 aa17.46■□□□□ 0.39
VCX3A-201ENST00000381089 LIMCH1Q9UPQ0 1083 aa17.46■□□□□ 0.39
VCX3A-201ENST00000381089 E9PMD0 336 aa17.45■□□□□ 0.38
VCX3A-201ENST00000381089 LAD1O00515 517 aa17.45■□□□□ 0.38
VCX3A-201ENST00000381089 TOM1L1O75674 476 aa17.45■□□□□ 0.38
VCX3A-201ENST00000381089 MATR3P43243 847 aaKnown RBP eCLIP17.45■□□□□ 0.38
VCX3A-201ENST00000381089 MLLT6P55198 1093 aaPredicted RBP17.45■□□□□ 0.38
VCX3A-201ENST00000381089 YWHAHQ04917 246 aaPredicted RBP17.45■□□□□ 0.38
VCX3A-201ENST00000381089 LRRC32Q14392 662 aa17.45■□□□□ 0.38
VCX3A-201ENST00000381089 USP37Q86T82 979 aa17.45■□□□□ 0.38
VCX3A-201ENST00000381089 MFSD6LQ8IWD5 586 aa17.45■□□□□ 0.38
VCX3A-201ENST00000381089 TRPV4Q9HBA0 871 aa17.45■□□□□ 0.38
VCX3A-201ENST00000381089 SHISA7A6NL88 538 aa17.44■□□□□ 0.38
VCX3A-201ENST00000381089 SLC16A4O15374 487 aa17.44■□□□□ 0.38
VCX3A-201ENST00000381089 VIPR2P41587 438 aa17.44■□□□□ 0.38
VCX3A-201ENST00000381089 CXCL12P48061 93 aa17.44■□□□□ 0.38
VCX3A-201ENST00000381089 EPHA5P54756 1037 aa17.44■□□□□ 0.38
VCX3A-201ENST00000381089 ST3GAL1Q11201 340 aa17.44■□□□□ 0.38
VCX3A-201ENST00000381089 PTGDRQ13258 359 aa17.44■□□□□ 0.38
VCX3A-201ENST00000381089 RINT1Q6NUQ1 792 aa17.44■□□□□ 0.38
VCX3A-201ENST00000381089 POTEHQ6S545 545 aa17.44■□□□□ 0.38
VCX3A-201ENST00000381089 PRR23BQ6ZRT6 265 aa17.44■□□□□ 0.38
VCX3A-201ENST00000381089 TAS1R3Q7RTX0 852 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms