RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 M0QZQ0 153 aa16.03■□□□□ 0.16
VCX3B-201ENST00000381029 TEX28O15482 410 aa16.03■□□□□ 0.16
VCX3B-201ENST00000381029 SMC2O95347 1197 aa16.03■□□□□ 0.16
VCX3B-201ENST00000381029 URODP06132 367 aa16.03■□□□□ 0.16
VCX3B-201ENST00000381029 CD44P16070 742 aaKnown RBP16.03■□□□□ 0.16
VCX3B-201ENST00000381029 TKTP29401 623 aaKnown RBP16.03■□□□□ 0.16
VCX3B-201ENST00000381029 CASP4P49662 377 aa16.03■□□□□ 0.16
VCX3B-201ENST00000381029 CLDN10P78369 228 aa16.03■□□□□ 0.16
VCX3B-201ENST00000381029 PSMD6Q15008 389 aa16.03■□□□□ 0.16
VCX3B-201ENST00000381029 CENPPQ6IPU0 288 aa16.03■□□□□ 0.16
VCX3B-201ENST00000381029 PRSS55Q6UWB4 352 aaPredicted RBP16.03■□□□□ 0.16
VCX3B-201ENST00000381029 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.03■□□□□ 0.16
VCX3B-201ENST00000381029 ZC3H3Q8IXZ2 948 aaKnown RBP16.03■□□□□ 0.16
VCX3B-201ENST00000381029 ADSSL1Q8N142 457 aa16.03■□□□□ 0.16
VCX3B-201ENST00000381029 BEST2Q8NFU1 509 aa16.03■□□□□ 0.16
VCX3B-201ENST00000381029 OR5B17Q8NGF7 314 aa16.03■□□□□ 0.16
VCX3B-201ENST00000381029 PPP2R3CQ969Q6 453 aa16.03■□□□□ 0.16
VCX3B-201ENST00000381029 TTPALQ9BTX7 342 aa16.03■□□□□ 0.16
VCX3B-201ENST00000381029 INTS13Q9NVM9 706 aa16.03■□□□□ 0.16
VCX3B-201ENST00000381029 DPP3Q9NY33 737 aa16.03■□□□□ 0.16
VCX3B-201ENST00000381029 SIX4Q9UIU6 781 aa16.03■□□□□ 0.16
VCX3B-201ENST00000381029 ADAM12O43184 909 aa16.02■□□□□ 0.16
VCX3B-201ENST00000381029 XPOTO43592 962 aaKnown RBP16.02■□□□□ 0.16
VCX3B-201ENST00000381029 PAPLNO95428 1278 aa16.02■□□□□ 0.16
VCX3B-201ENST00000381029 NR3C1P04150 777 aa16.02■□□□□ 0.16
VCX3B-201ENST00000381029 CLCN4P51793 760 aa16.02■□□□□ 0.16
VCX3B-201ENST00000381029 PMS1P54277 932 aaKnown RBP16.02■□□□□ 0.16
VCX3B-201ENST00000381029 LILRA4P59901 499 aa16.02■□□□□ 0.16
VCX3B-201ENST00000381029 SKIV2LQ15477 1246 aaKnown RBP16.02■□□□□ 0.16
VCX3B-201ENST00000381029 LEXMQ3ZCV2 418 aa16.02■□□□□ 0.16
VCX3B-201ENST00000381029 C1orf220Q5T0J3 134 aa16.02■□□□□ 0.16
VCX3B-201ENST00000381029 LILRA6Q6PI73 481 aa16.02■□□□□ 0.16
VCX3B-201ENST00000381029 RSPO2Q6UXX9 243 aaPredicted RBP16.02■□□□□ 0.16
VCX3B-201ENST00000381029 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.02■□□□□ 0.16
VCX3B-201ENST00000381029 GPT2Q8TD30 523 aa16.02■□□□□ 0.16
VCX3B-201ENST00000381029 ATXN2LQ8WWM7 1075 aaKnown RBP16.02■□□□□ 0.16
VCX3B-201ENST00000381029 RIN2Q8WYP3 895 aaPredicted RBP16.02■□□□□ 0.16
VCX3B-201ENST00000381029 ZNF516Q92618 1163 aa16.02■□□□□ 0.16
VCX3B-201ENST00000381029 CLSTN3Q9BQT9 956 aa16.02■□□□□ 0.16
VCX3B-201ENST00000381029 IGFLR1Q9H665 355 aa16.02■□□□□ 0.16
VCX3B-201ENST00000381029 CLDND1Q9NY35 253 aa16.02■□□□□ 0.16
VCX3B-201ENST00000381029 HOOK1Q9UJC3 728 aaKnown RBP16.02■□□□□ 0.16
VCX3B-201ENST00000381029 SCN1AP35498 2009 aa16.02■□□□□ 0.15
VCX3B-201ENST00000381029 FSD2A1L4K1 749 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 PPP1R3GB7ZBB8 358 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 C2CD2LO14523 706 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 SYN3O14994 580 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 MAPK13O15264 365 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 KIF20AO95235 890 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 C1RP00736 705 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 EPCAMP16422 314 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 EDRF1Q3B7T1 1238 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 LMBRD2Q68DH5 695 aaPredicted RBP16.01■□□□□ 0.15
VCX3B-201ENST00000381029 SYCE2Q6PIF2 218 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 WDR49Q8IV35 697 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 RDH13Q8NBN7 331 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 PARD3BQ8TEW8 1205 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 GBP4Q96PP9 640 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 MTMR12Q9C0I1 747 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 S1PR5Q9H228 398 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 CLSTN2Q9H4D0 955 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.01■□□□□ 0.15
VCX3B-201ENST00000381029 KIAA1468Q9P260 1216 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 MTRRQ9UBK8 725 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 BARX2Q9UMQ3 279 aaPredicted RBP16.01■□□□□ 0.15
VCX3B-201ENST00000381029 SSX2IPQ9Y2D8 614 aa16.01■□□□□ 0.15
VCX3B-201ENST00000381029 H3BQ06 376 aaPredicted RBP16■□□□□ 0.15
VCX3B-201ENST00000381029 TRAPPC3O43617 180 aa16■□□□□ 0.15
VCX3B-201ENST00000381029 EXOC3O60645 756 aa16■□□□□ 0.15
VCX3B-201ENST00000381029 AKAP3O75969 853 aa16■□□□□ 0.15
VCX3B-201ENST00000381029 BMP1P13497 986 aa16■□□□□ 0.15
VCX3B-201ENST00000381029 RPL17P18621 184 aaKnown RBP16■□□□□ 0.15
VCX3B-201ENST00000381029 KCNA5P22460 613 aa16■□□□□ 0.15
VCX3B-201ENST00000381029 KCNQ1P51787 676 aa16■□□□□ 0.15
VCX3B-201ENST00000381029 TFAMQ00059 246 aaKnown RBP16■□□□□ 0.15
VCX3B-201ENST00000381029 BMS1Q14692 1282 aaKnown RBP16■□□□□ 0.15
VCX3B-201ENST00000381029 SURF1Q15526 300 aa16■□□□□ 0.15
VCX3B-201ENST00000381029 CAMK4Q16566 473 aa16■□□□□ 0.15
VCX3B-201ENST00000381029 SMRP1Q8NCR6 262 aa16■□□□□ 0.15
VCX3B-201ENST00000381029 FEZF2Q8TBJ5 459 aa16■□□□□ 0.15
VCX3B-201ENST00000381029 ASB2Q96Q27 587 aa16■□□□□ 0.15
VCX3B-201ENST00000381029 POP1Q99575 1024 aaKnown RBP16■□□□□ 0.15
VCX3B-201ENST00000381029 CGRRF1Q99675 332 aa16■□□□□ 0.15
VCX3B-201ENST00000381029 GTPBP4Q9BZE4 634 aaKnown RBP16■□□□□ 0.15
VCX3B-201ENST00000381029 PCDHB8Q9UN66 801 aa16■□□□□ 0.15
VCX3B-201ENST00000381029 BACE2Q9Y5Z0 518 aa16■□□□□ 0.15
VCX3B-201ENST00000381029 CALUO43852 315 aaPredicted RBP15.99■□□□□ 0.15
VCX3B-201ENST00000381029 CYP11A1P05108 521 aa15.99■□□□□ 0.15
VCX3B-201ENST00000381029 PAX3P23760 479 aa15.99■□□□□ 0.15
VCX3B-201ENST00000381029 NR2F2P24468 414 aa15.99■□□□□ 0.15
VCX3B-201ENST00000381029 PSMD5Q16401 504 aa15.99■□□□□ 0.15
VCX3B-201ENST00000381029 VARS2Q5ST30 1063 aaKnown RBP15.99■□□□□ 0.15
VCX3B-201ENST00000381029 ISM2Q6H9L7 571 aa15.99■□□□□ 0.15
VCX3B-201ENST00000381029 SLC8B1Q6J4K2 584 aa15.99■□□□□ 0.15
VCX3B-201ENST00000381029 KIAA1841Q6NSI8 718 aa15.99■□□□□ 0.15
VCX3B-201ENST00000381029 ANKRD54Q6NXT1 300 aa15.99■□□□□ 0.15
VCX3B-201ENST00000381029 FOXR2Q6PJQ5 311 aa15.99■□□□□ 0.15
VCX3B-201ENST00000381029 LIMS2Q7Z4I7 341 aa15.99■□□□□ 0.15
VCX3B-201ENST00000381029 EMILIN2Q9BXX0 1053 aa15.99■□□□□ 0.15
VCX3B-201ENST00000381029 ITGA11Q9UKX5 1188 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms