RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 HSD17B14Q9BPX1 270 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 TRIM51Q9BSJ1 452 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 OSBPL8Q9BZF1 889 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 CARD9Q9H257 536 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 ZCCHC17Q9NP64 241 aaKnown RBP12.95□□□□□ -0.34
GABPB1-203ENST00000380877 KLK14Q9P0G3 267 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 H3BRJ5 948 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 PHF2O75151 1096 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 MOCS2O96007 188 aaPredicted RBP12.95□□□□□ -0.34
GABPB1-203ENST00000380877 ARSEP51690 589 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 SV2CQ496J9 727 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 C4orf50Q6ZRC1 276 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 USP38Q8NB14 1042 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 UBA3Q8TBC4 463 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 TRAPPC12Q8WVT3 735 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 DNAJC18Q9H819 358 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 DPP3Q9NY33 737 aa12.95□□□□□ -0.34
GABPB1-203ENST00000380877 SLC4A1P02730 911 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 STAG3L1P0CL83 205 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 THOC5Q13769 683 aaKnown RBP12.94□□□□□ -0.34
GABPB1-203ENST00000380877 BTBD8Q5XKL5 378 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 RYBPQ8N488 228 aaPredicted RBP12.94□□□□□ -0.34
GABPB1-203ENST00000380877 FEZF2Q8TBJ5 459 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 TTC25Q96NG3 672 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 USP20Q9Y2K6 914 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 AFG3L2Q9Y4W6 797 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 MYPNQ86TC9 1320 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 IQANK1A0A1B0GTG1 560 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 IFT88Q13099 833 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 PDCLQ13371 301 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 CCNI2Q6ZMN8 369 aaPredicted RBP12.94□□□□□ -0.34
GABPB1-203ENST00000380877 PPFIBP2Q8ND30 876 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 MICAL1Q8TDZ2 1067 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 DHX38Q92620 1227 aaKnown RBP12.94□□□□□ -0.34
GABPB1-203ENST00000380877 RUBCNQ92622 972 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 PPME1Q9Y570 386 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 KLRG2A4D1S0 409 aaPredicted RBP12.94□□□□□ -0.34
GABPB1-203ENST00000380877 NKRFO15226 690 aaKnown RBP eCLIP12.94□□□□□ -0.34
GABPB1-203ENST00000380877 ADCY3O60266 1144 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 KRT37O76014 449 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 GZMAP12544 262 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 ZFXP17010 805 aaPredicted RBP12.94□□□□□ -0.34
GABPB1-203ENST00000380877 TAF6P49848 677 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 EIF3EP60228 445 aaKnown RBP12.94□□□□□ -0.34
GABPB1-203ENST00000380877 COG7P83436 770 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 NID2Q14112 1375 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 HP1BP3Q5SSJ5 553 aaPredicted RBP12.94□□□□□ -0.34
GABPB1-203ENST00000380877 CDKL3Q8IVW4 592 aaPredicted RBP12.94□□□□□ -0.34
GABPB1-203ENST00000380877 SETD4Q9NVD3 440 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 AIPL1Q9NZN9 384 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 PHRF1Q9P1Y6 1649 aaKnown RBP12.94□□□□□ -0.34
GABPB1-203ENST00000380877 TLK1Q9UKI8 766 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 IGKV6D-41A0A0C4DH26 115 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 ATP9AO75110 1047 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 SPATA31C1P0DKV0 1188 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 RNF180Q86T96 592 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 MAP4K3Q8IVH8 894 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 EHD2Q9NZN4 543 aa12.94□□□□□ -0.34
GABPB1-203ENST00000380877 KDM3BQ7LBC6 1761 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 MANSC4A6NHS7 340 aaPredicted RBP12.93□□□□□ -0.34
GABPB1-203ENST00000380877 CTIFO43310 598 aaKnown RBP12.93□□□□□ -0.34
GABPB1-203ENST00000380877 PCSK1P29120 753 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 CYP2C19P33261 490 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 MYL6P60660 151 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 C2CD6Q53TS8 623 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 LRRC55Q6ZSA7 311 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 CD302Q8IX05 232 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 SPATA20Q8TB22 786 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 DEPDC1BQ8WUY9 529 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 MED15Q96RN5 788 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 TRIM62Q9BVG3 475 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 POLIQ9UNA4 740 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 FNDC3AQ9Y2H6 1198 aaKnown RBP12.93□□□□□ -0.34
GABPB1-203ENST00000380877 PLIN4Q96Q06 1357 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 RASA4BC9J798 803 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 RASA4O43374 803 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 RAD51CO43502 376 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 GNL1P36915 607 aaPredicted RBP12.93□□□□□ -0.34
GABPB1-203ENST00000380877 PNPLA4P41247 253 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 MAGOHP61326 146 aaKnown RBP12.93□□□□□ -0.34
GABPB1-203ENST00000380877 PDIA2Q13087 525 aaKnown RBP12.93□□□□□ -0.34
GABPB1-203ENST00000380877 SPOPLQ6IQ16 392 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 WDR49Q8IV35 697 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 TRIM42Q8IWZ5 723 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 GDAP1Q8TB36 358 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 PARD3BQ8TEW8 1205 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.93□□□□□ -0.348e-6■■■■□ 19.7
GABPB1-203ENST00000380877 CYP4A22Q5TCH4 519 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 SPATA2LQ8IUW3 424 aaPredicted RBP12.93□□□□□ -0.34
GABPB1-203ENST00000380877 EFCAB13Q8IY85 973 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 SRRM1Q8IYB3 904 aaKnown RBP12.93□□□□□ -0.34
GABPB1-203ENST00000380877 SLC20A1Q8WUM9 679 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 CPB2Q96IY4 423 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 GCNAQ96QF7 691 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 OSMRQ99650 979 aa12.93□□□□□ -0.34
GABPB1-203ENST00000380877 ZBBXA8MT70 800 aa12.92□□□□□ -0.34
GABPB1-203ENST00000380877 TISP43B9A030 160 aa12.92□□□□□ -0.34
GABPB1-203ENST00000380877 APOL1O14791 398 aa12.92□□□□□ -0.34
GABPB1-203ENST00000380877 CXCL8P10145 99 aa12.92□□□□□ -0.34
GABPB1-203ENST00000380877 THPOP40225 353 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms