RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 ANKS1BQ7Z6G8 1248 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 FITM2Q8N6M3 262 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 AGAP11Q8TF27 550 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 ZNF526Q8TF50 670 aaPredicted RBP17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 POLR3FQ9H1D9 316 aaPredicted RBP17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 JPH1Q9HDC5 661 aaPredicted RBP17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 NINJ2Q9NZG7 142 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 ANKFY1Q9P2R3 1169 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 MROH7Q68CQ1 1323 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 ADGRA3Q8IWK6 1321 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 KRT16P08779 473 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 ADCY8P40145 1251 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 GTF2BQ00403 316 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 MGAT5Q09328 741 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 HP1BP3Q5SSJ5 553 aaPredicted RBP17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 PARD3BQ8TEW8 1205 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 FAM212AQ96EL1 285 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 ADAM33Q9BZ11 813 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 WHRNQ9P202 907 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 SLC9A2Q9UBY0 812 aa17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 ZNF214Q9UL59 606 aaPredicted RBP17.3■□□□□ 0.36
NKX3-1-201ENST00000380871 CFHP08603 1231 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 TNNI1P19237 187 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 DSG3P32926 999 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 NIPA1Q7RTP0 329 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 MAGEC3Q8TD91 643 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 SNF8Q96H20 258 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 ZBTB45Q96K62 511 aaPredicted RBP17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 KLHL11Q9NVR0 708 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 GJB6O95452 261 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 NQO1P15559 274 aaKnown RBP17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 MARK3P27448 753 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 SLC8A1P32418 973 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 POLGP54098 1239 aaPredicted RBP17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 SP2Q02086 613 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 KRT39Q6A163 491 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 ACAD10Q6JQN1 1059 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 FAM47EQ6ZV65 393 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 NCAPG2Q86XI2 1143 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 TGS1Q96RS0 853 aaKnown RBP17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 ROPN1BQ9BZX4 212 aaPredicted RBP17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 ROPN1Q9HAT0 212 aaPredicted RBP17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 UVRAGQ9P2Y5 699 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 RALAP11233 206 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 SFNP31947 248 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 TMEM63BQ5T3F8 832 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 GADL1Q6ZQY3 521 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 C12orf56Q8IXR9 622 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 ANKLE1Q8NAG6 615 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 ATP6V0A1Q93050 837 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 SERPINB12Q96P63 405 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 EXOC7Q9UPT5 735 aa17.29■□□□□ 0.36
NKX3-1-201ENST00000380871 CDC25CP30307 473 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 SPOPLQ6IQ16 392 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 CYP4F22Q6NT55 531 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 SLC39A4Q6P5W5 647 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 TLDC1Q6P9B6 456 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 SV2AQ7L0J3 742 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 SPATA21Q7Z572 469 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 PASD1Q8IV76 773 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 MORC4Q8TE76 937 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 SPOCK2Q92563 424 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 TEX13BQ9BXU2 312 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 DCLK3Q9C098 648 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 RAB20Q9NX57 234 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 TNS1Q9HBL0 1735 aaKnown RBP17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 PSAPP07602 524 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 ATF2P15336 505 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 RPS12P25398 132 aaKnown RBP17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 LIG4P49917 911 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 CLEC16AQ2KHT3 1053 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 GALNTL6Q49A17 601 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 NT5C1BQ96P26 610 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 VPS33BQ9H267 617 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 ACAD9Q9H845 621 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 CYP39A1Q9NYL5 469 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 ANAPC5Q9UJX4 755 aa17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 ZNF646O15015 1829 aaPredicted RBP17.28■□□□□ 0.36
NKX3-1-201ENST00000380871 HIRAP54198 1017 aaPredicted RBP17.27■□□□□ 0.36
NKX3-1-201ENST00000380871 MOB2Q70IA6 237 aa17.27■□□□□ 0.36
NKX3-1-201ENST00000380871 CROCCP2Q86T23 111 aa17.27■□□□□ 0.36
NKX3-1-201ENST00000380871 NSMCE1Q8WV22 266 aa17.27■□□□□ 0.36
NKX3-1-201ENST00000380871 CKAP2Q8WWK9 683 aa17.27■□□□□ 0.36
NKX3-1-201ENST00000380871 KLHL29Q96CT2 875 aa17.27■□□□□ 0.36
NKX3-1-201ENST00000380871 IFT74Q96LB3 600 aa17.27■□□□□ 0.36
NKX3-1-201ENST00000380871 PAIP2Q9BPZ3 127 aaKnown RBP17.27■□□□□ 0.36
NKX3-1-201ENST00000380871 R3HDMLQ9H3Y0 253 aa17.27■□□□□ 0.36
NKX3-1-201ENST00000380871 NAALADL1Q9UQQ1 740 aa17.27■□□□□ 0.36
NKX3-1-201ENST00000380871 SUN1O94901 812 aa17.27■□□□□ 0.36
NKX3-1-201ENST00000380871 KCNA2P16389 499 aa17.27■□□□□ 0.36
NKX3-1-201ENST00000380871 FOXN2P32314 431 aa17.27■□□□□ 0.36
NKX3-1-201ENST00000380871 GLIS1Q8NBF1 620 aa17.27■□□□□ 0.36
NKX3-1-201ENST00000380871 FBXL13Q8NEE6 735 aa17.27■□□□□ 0.36
NKX3-1-201ENST00000380871 ATP6V0A4Q9HBG4 840 aa17.27■□□□□ 0.36
NKX3-1-201ENST00000380871 XPNPEP1Q9NQW7 623 aa17.27■□□□□ 0.36
NKX3-1-201ENST00000380871 ANKEF1Q9NU02 776 aa17.27■□□□□ 0.36
NKX3-1-201ENST00000380871 CD58P19256 250 aa17.27■□□□□ 0.35
NKX3-1-201ENST00000380871 ITIH2P19823 946 aa17.27■□□□□ 0.35
NKX3-1-201ENST00000380871 CLNS1AP54105 237 aaKnown RBP17.27■□□□□ 0.35
NKX3-1-201ENST00000380871 PTK6Q13882 451 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms