RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 C11orf57Q6ZUT1 292 aaPredicted RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 GPIHBP1Q8IV16 184 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 SUGP1Q8IWZ8 645 aaKnown RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 KLHL29Q96CT2 875 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 MRIQ9BWK5 157 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 SIK2Q9H0K1 926 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 TMEM260Q9NX78 707 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 LIMA1Q9UHB6 759 aaKnown RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 STK38LQ9Y2H1 464 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 ITIH6Q6UXX5 1313 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 FAM196BA6NMK8 535 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 PRCPP42785 496 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 EXOSC10Q01780 885 aaKnown RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 GRIN1Q05586 938 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 ZNF177Q13360 481 aaPredicted RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 STARD3Q14849 445 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 MGAT5BQ3V5L5 792 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 RBBP8NLQ8NC74 664 aaPredicted RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 CATSPER1Q8NEC5 780 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 HPS3Q969F9 1004 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 TTC17Q96AE7 1141 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 TSPAN18Q96SJ8 248 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 MUC3BQ9H195 1237 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 G3BP2Q9UN86 482 aaKnown RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 ARHGAP26Q9UNA1 814 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 CDC42BPAQ5VT25 1732 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 CAMSAP1Q5T5Y3 1602 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 GNRH1P01148 92 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 AKT1P31749 480 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 RENBPP51606 427 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 NCKAP1LP55160 1127 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 PPATQ06203 517 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 KRT72Q14CN4 511 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 EFTUD2Q15029 972 aaKnown RBP eCLIP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 ZSCAN26Q16670 478 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 DSG4Q86SJ6 1040 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 CHSY1Q86X52 802 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 FMR1NBQ8N0W7 255 aaPredicted RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 RAPGEF5Q92565 580 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 ARHGEF26Q96DR7 871 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 NAT9Q9BTE0 207 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 KIAA1683Q9H0B3 1180 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 VPS11Q9H270 941 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 XAB2Q9HCS7 855 aaKnown RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 RIC8BQ9NVN3 520 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 AKAP7Q9P0M2 348 aaPredicted RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 SLC25A13Q9UJS0 675 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 CDV3Q9UKY7 258 aaKnown RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 PLSCR1O15162 318 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 TYK2P29597 1187 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 HMOX2P30519 316 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 GNL1P36915 607 aaPredicted RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 GEMP55040 296 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 SKP1P63208 163 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 CENPCQ03188 943 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 EZH2Q15910 746 aaKnown RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 SNCBQ16143 134 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 ANKRD23Q86SG2 305 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 TRIM59Q8IWR1 403 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 SRBD1Q8N5C6 995 aaKnown RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 TNIP2Q8NFZ5 429 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 GPT2Q8TD30 523 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 BTBD6Q96KE9 485 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 SEPT5Q99719 369 aaPredicted RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 CAPN11Q9UMQ6 739 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 PKP3Q9Y446 797 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 DIP2CQ9Y2E4 1556 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 NCF2P19878 526 aaPredicted RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 NR1D1P20393 614 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 FDFT1P37268 417 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 IL1RL1Q01638 556 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 IRAK1BP1Q5VVH5 260 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 SETD3Q86TU7 594 aaPredicted RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 GRAMD1CQ8IYS0 662 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 TADA1Q96BN2 335 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 ATG4CQ96DT6 458 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 SAAL1Q96ER3 474 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 MYCBPQ99417 103 aaPredicted RBP7.53□□□□□ -1.2
CCDC171-201ENST00000380701 UBXN6Q9BZV1 441 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 GTSE1Q9NYZ3 720 aa7.53□□□□□ -1.2
CCDC171-201ENST00000380701 OPLAHO14841 1288 aa7.52□□□□□ -1.2
CCDC171-201ENST00000380701 PALMO75781 387 aa7.52□□□□□ -1.2
CCDC171-201ENST00000380701 FMO5P49326 533 aa7.52□□□□□ -1.2
CCDC171-201ENST00000380701 TP53BP2Q13625 1128 aa7.52□□□□□ -1.2
CCDC171-201ENST00000380701 SIRT2Q8IXJ6 389 aa7.52□□□□□ -1.2
CCDC171-201ENST00000380701 SPTLC3Q9NUV7 552 aa7.52□□□□□ -1.2
CCDC171-201ENST00000380701 E2F6O75461 281 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 CTSHP09668 335 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 SPRP35270 261 aaPredicted RBP7.52□□□□□ -1.21
CCDC171-201ENST00000380701 EIF3EP60228 445 aaKnown RBP7.52□□□□□ -1.21
CCDC171-201ENST00000380701 PPIL2Q13356 520 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 PEX6Q13608 980 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 ITGA9Q13797 1035 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 ACBD5Q5T8D3 534 aaPredicted RBP7.52□□□□□ -1.21
CCDC171-201ENST00000380701 TMCO4Q5TGY1 634 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 METTL7BQ6UX53 244 aa7.52□□□□□ -1.21
CCDC171-201ENST00000380701 TRMT10CQ7L0Y3 403 aaKnown RBP7.52□□□□□ -1.21
CCDC171-201ENST00000380701 UHMK1Q8TAS1 419 aaKnown RBP7.52□□□□□ -1.21
CCDC171-201ENST00000380701 TMC2Q8TDI7 906 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms