RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 C22orf31O95567 290 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 SLC10A3P09131 477 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 ADORA2AP29274 412 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 MAPK4P31152 587 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 ZNF132P52740 706 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 DRG2P55039 364 aaKnown RBP24.68■■□□□ 1.54
VPS16-201ENST00000380443 YWHAEP62258 255 aaKnown RBP24.68■■□□□ 1.54
VPS16-201ENST00000380443 TNFAIP2Q03169 654 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 NOGQ13253 232 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 CFAP58Q5T655 872 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 SPOPLQ6IQ16 392 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 TMEM270Q6UE05 265 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 MAMDC4Q6UXC1 1216 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 ZBTB33Q86T24 672 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 PHF13Q86YI8 300 aaPredicted RBP24.68■■□□□ 1.54
VPS16-201ENST00000380443 CD302Q8IX05 232 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 AMACRQ9UHK6 382 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 ESYT3A0FGR9 886 aa24.67■■□□□ 1.54
VPS16-201ENST00000380443 ZSCAN5CA6NGD5 496 aaPredicted RBP24.67■■□□□ 1.54
VPS16-201ENST00000380443 PHF2O75151 1096 aa24.67■■□□□ 1.54
VPS16-201ENST00000380443 C1QBPQ07021 282 aaKnown RBP24.67■■□□□ 1.54
VPS16-201ENST00000380443 IQCKQ8N0W5 287 aa24.67■■□□□ 1.54
VPS16-201ENST00000380443 C1orf131Q8NDD1 294 aaKnown RBP24.67■■□□□ 1.54
VPS16-201ENST00000380443 MAIP1Q8WWC4 291 aa24.67■■□□□ 1.54
VPS16-201ENST00000380443 SCINQ9Y6U3 715 aa24.67■■□□□ 1.54
VPS16-201ENST00000380443 CCL15-CCL14A0A0B4J2E2 113 aa24.66■■□□□ 1.54
VPS16-201ENST00000380443 ATMINO43313 823 aaPredicted RBP24.66■■□□□ 1.54
VPS16-201ENST00000380443 TNNC2P02585 160 aa24.66■■□□□ 1.54
VPS16-201ENST00000380443 LGALS2P05162 132 aa24.66■■□□□ 1.54
VPS16-201ENST00000380443 TNFSF9P41273 254 aa24.66■■□□□ 1.54
VPS16-201ENST00000380443 MBTD1Q05BQ5 628 aa24.66■■□□□ 1.54
VPS16-201ENST00000380443 TRPC3Q13507 836 aa24.66■■□□□ 1.54
VPS16-201ENST00000380443 HLTFQ14527 1009 aaKnown RBP eCLIP24.66■■□□□ 1.54
VPS16-201ENST00000380443 CCL15Q16663 113 aa24.66■■□□□ 1.54
VPS16-201ENST00000380443 MON1BQ7L1V2 547 aa24.66■■□□□ 1.54
VPS16-201ENST00000380443 RASAL3Q86YV0 1011 aa24.66■■□□□ 1.54
VPS16-201ENST00000380443 KRT35Q92764 455 aa24.66■■□□□ 1.54
VPS16-201ENST00000380443 ANKRD36BP1Q96IX9 119 aa24.66■■□□□ 1.54
VPS16-201ENST00000380443 NIF3L1Q9GZT8 377 aa24.66■■□□□ 1.54
VPS16-201ENST00000380443 MCM3APO60318 1980 aa24.66■■□□□ 1.54
VPS16-201ENST00000380443 TTLL13PA6NNM8 815 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 BTBD19C9JJ37 291 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 INO80B-WBP1J3KQ70 363 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 PPFIA4O75335 1185 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 TMOD1P28289 359 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 MAP2K2P36507 400 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 DR1Q01658 176 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 PTP4A2Q12974 167 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 CYP1B1Q16678 543 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 ZNF568Q3ZCX4 644 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 TSEN2Q8NCE0 465 aaKnown RBP24.65■■□□□ 1.54
VPS16-201ENST00000380443 INO80BQ9C086 356 aaPredicted RBP24.65■■□□□ 1.54
VPS16-201ENST00000380443 PCYOX1Q9UHG3 505 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 ANAPC7Q9UJX3 599 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.65■■□□□ 1.54
VPS16-201ENST00000380443 MYO1FO00160 1098 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 PODXLO00592 558 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 LSM8O95777 96 aaKnown RBP24.65■■□□□ 1.54
VPS16-201ENST00000380443 NOMO3P69849 1222 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 ZNF211Q13398 564 aaPredicted RBP24.65■■□□□ 1.54
VPS16-201ENST00000380443 MTMR3Q13615 1198 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 SPDYCQ5MJ68 293 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 NAA35Q5VZE5 725 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 LRIG3Q6UXM1 1119 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 LINC01465Q8N7H1 131 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 NLRP4Q96MN2 994 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 ZNF518BQ9C0D4 1074 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.65■■□□□ 1.54
VPS16-201ENST00000380443 PLXNA1Q9UIW2 1896 aa24.65■■□□□ 1.54
VPS16-201ENST00000380443 FAM155AB1AL88 458 aaPredicted RBP24.64■■□□□ 1.54
VPS16-201ENST00000380443 TTI1O43156 1089 aa24.64■■□□□ 1.54
VPS16-201ENST00000380443 HOXC6P09630 235 aa24.64■■□□□ 1.54
VPS16-201ENST00000380443 FAM153BP0C7A2 387 aa24.64■■□□□ 1.54
VPS16-201ENST00000380443 TMEM191BP0C7N4 346 aa24.64■■□□□ 1.54
VPS16-201ENST00000380443 MCF2P10911 925 aa24.64■■□□□ 1.54
VPS16-201ENST00000380443 INSRRP14616 1297 aa24.64■■□□□ 1.54
VPS16-201ENST00000380443 FAM153CQ494X1 144 aa24.64■■□□□ 1.54
VPS16-201ENST00000380443 CYFIP2Q96F07 1278 aa24.64■■□□□ 1.54
VPS16-201ENST00000380443 RNPEPQ9H4A4 650 aa24.64■■□□□ 1.54
VPS16-201ENST00000380443 FAM204AQ9H8W3 233 aa24.64■■□□□ 1.54
VPS16-201ENST00000380443 RPF1Q9H9Y2 349 aaKnown RBP24.64■■□□□ 1.54
VPS16-201ENST00000380443 FAM153AQ9UHL3 310 aa24.64■■□□□ 1.54
VPS16-201ENST00000380443 PLXNB2O15031 1838 aa24.64■■□□□ 1.53
VPS16-201ENST00000380443 ERLIN2O94905 339 aa24.63■■□□□ 1.53
VPS16-201ENST00000380443 ECHS1P30084 290 aa24.63■■□□□ 1.53
VPS16-201ENST00000380443 TMEM132AQ24JP5 1023 aa24.63■■□□□ 1.53
VPS16-201ENST00000380443 SEZ6Q53EL9 994 aa24.63■■□□□ 1.53
VPS16-201ENST00000380443 SLC13A5Q86YT5 568 aaPredicted RBP24.63■■□□□ 1.53
VPS16-201ENST00000380443 CPA5Q8WXQ8 436 aa24.63■■□□□ 1.53
VPS16-201ENST00000380443 ELMO3Q96BJ8 720 aa24.63■■□□□ 1.53
VPS16-201ENST00000380443 FAM84AQ96KN4 292 aa24.63■■□□□ 1.53
VPS16-201ENST00000380443 ERP44Q9BS26 406 aa24.63■■□□□ 1.53
VPS16-201ENST00000380443 FAM129AQ9BZQ8 928 aa24.63■■□□□ 1.53
VPS16-201ENST00000380443 MTMR12Q9C0I1 747 aa24.63■■□□□ 1.53
VPS16-201ENST00000380443 ADAM22Q9P0K1 906 aa24.63■■□□□ 1.53
VPS16-201ENST00000380443 THAP12O43422 761 aa24.63■■□□□ 1.53
VPS16-201ENST00000380443 CST3P01034 146 aaPredicted RBP24.63■■□□□ 1.53
VPS16-201ENST00000380443 RRM1P23921 792 aa24.63■■□□□ 1.53
VPS16-201ENST00000380443 CLCN3P51790 818 aa24.63■■□□□ 1.53
VPS16-201ENST00000380443 PLEKHA7Q6IQ23 1121 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms