RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 CLASP2O75122 1294 aaKnown RBP9.89□□□□□ -0.83
PTPRA-204ENST00000380393 ANPEPP15144 967 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 IST1P53990 364 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 NR5A1Q13285 461 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 PDK3Q15120 406 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 LRRC36Q1X8D7 754 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 TIGD2Q4W5G0 525 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 DIS3L2Q8IYB7 885 aaKnown RBP9.89□□□□□ -0.83
PTPRA-204ENST00000380393 C12orf50Q8NA57 414 aaPredicted RBP9.89□□□□□ -0.83
PTPRA-204ENST00000380393 ACTRT2Q8TDY3 377 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 GLMNQ92990 594 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 GRAMD1AQ96CP6 724 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 PAIP1Q9H074 479 aaKnown RBP9.89□□□□□ -0.83
PTPRA-204ENST00000380393 MARCH7Q9H992 704 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 THAP1Q9NVV9 213 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 PCDHB6Q9Y5E3 794 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 PIK3CDO00329 1044 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 TRAFD1O14545 582 aaPredicted RBP9.88□□□□□ -0.83
PTPRA-204ENST00000380393 HAT1O14929 419 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 B4GALT4O60513 344 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 EXOC3O60645 756 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 GAS8O95995 478 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 SMIM18P0DKX4 95 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 PHKA2P46019 1235 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 YARSP54577 528 aaKnown RBP9.88□□□□□ -0.83
PTPRA-204ENST00000380393 KRT76Q01546 638 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 DPYDQ12882 1025 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 PDAP1Q13442 181 aaKnown RBP9.88□□□□□ -0.83
PTPRA-204ENST00000380393 NOP9Q86U38 636 aaKnown RBP9.88□□□□□ -0.83
PTPRA-204ENST00000380393 METTL25Q8N6Q8 603 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 OR6Y1Q8NGX8 325 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 PIP4K2CQ8TBX8 421 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 EPS8L3Q8TE67 593 aaKnown RBP9.88□□□□□ -0.83
PTPRA-204ENST00000380393 CKAP2Q8WWK9 683 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 OTUD5Q96G74 571 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 AP1M1Q9BXS5 423 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 CSRNP2Q9H175 543 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 ZFYVE28Q9HCC9 887 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 CABP5Q9NP86 173 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 ATRNO75882 1429 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 DOT1LQ8TEK3 1739 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 NWD2Q9ULI1 1742 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 PXDNLA1KZ92 1463 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 ZBTB43O43298 467 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 CRKLP46109 303 aaKnown RBP9.88□□□□□ -0.83
PTPRA-204ENST00000380393 STAT2P52630 851 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 EHHADHQ08426 723 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 MMEL1Q495T6 779 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 CDONQ4KMG0 1287 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 TUBA3EQ6PEY2 450 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 PEX26Q7Z412 305 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 SAMD14Q8IZD0 417 aaPredicted RBP9.88□□□□□ -0.83
PTPRA-204ENST00000380393 ZKSCAN3Q9BRR0 538 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 AGXT2Q9BYV1 514 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 RNF41Q9H4P4 317 aaPredicted RBP9.88□□□□□ -0.83
PTPRA-204ENST00000380393 LIN28AQ9H9Z2 209 aaKnown RBP9.88□□□□□ -0.83
PTPRA-204ENST00000380393 HMGXB4Q9UGU5 601 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 C15orf38-AP3S2A0A0A6YYH1 394 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 hCG_1642624A0A1W2PR95 340 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 FAM170AA1A519 330 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 GYG2O15488 501 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 NUDT17P0C025 328 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 PRKACAP17612 351 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 ANTXR2P58335 489 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 KCNA1Q09470 495 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 LVRNQ6Q4G3 990 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 ARPINQ7Z6K5 226 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 MMAAQ8IVH4 418 aaKnown RBP9.88□□□□□ -0.83
PTPRA-204ENST00000380393 PAF1Q8N7H5 531 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 LINC00116Q8NCU8 138 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 RPGRQ92834 1020 aaKnown RBP9.88□□□□□ -0.83
PTPRA-204ENST00000380393 SNF8Q96H20 258 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 MRPL9Q9BYD2 267 aaKnown RBP9.88□□□□□ -0.83
PTPRA-204ENST00000380393 SHCBP1LQ9BZQ2 653 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 ANKRD2Q9GZV1 360 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 KLHL25Q9H0H3 589 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 WDR6Q9NNW5 1121 aaKnown RBP9.88□□□□□ -0.83
PTPRA-204ENST00000380393 MAN1C1Q9NR34 630 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 PCDHGA11Q9Y5H2 935 aa9.88□□□□□ -0.83
PTPRA-204ENST00000380393 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.88□□□□□ -0.83
PTPRA-204ENST00000380393 WDR91A4D1P6 747 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 H3BSA7 217 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 CCDC22O60826 627 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 USP1O94782 785 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 BAIAP3O94812 1187 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 STARD3NLO95772 234 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 UQCRBP14927 111 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 RPS3AP61247 264 aaKnown RBP9.87□□□□□ -0.83
PTPRA-204ENST00000380393 PTK2Q05397 1052 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 PDE4DQ08499 809 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 SSRP1Q08945 709 aaKnown RBP9.87□□□□□ -0.83
PTPRA-204ENST00000380393 ZCCHC8Q6NZY4 707 aaKnown RBP9.87□□□□□ -0.83
PTPRA-204ENST00000380393 POTEHQ6S545 545 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 NLRP10Q86W26 655 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 ELMOD1Q8N336 334 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 GALNT4Q8N4A0 578 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 HCAR2Q8TDS4 363 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 MAP3K14Q99558 947 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 EMILIN3Q9NT22 766 aa9.87□□□□□ -0.83
PTPRA-204ENST00000380393 SLC38A7Q9NVC3 462 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms