RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 TDRD10Q5VZ19 366 aaKnown RBP23.03■■□□□ 1.28
TRIM54-202ENST00000380075 TRIM72Q6ZMU5 477 aa23.03■■□□□ 1.28
TRIM54-202ENST00000380075 PI4K2AQ9BTU6 479 aa23.03■■□□□ 1.28
TRIM54-202ENST00000380075 AZI2Q9H6S1 392 aa23.03■■□□□ 1.28
TRIM54-202ENST00000380075 TMEM110-MUSTN1A8MSY1 372 aa23.02■■□□□ 1.28
TRIM54-202ENST00000380075 DAPK3O43293 454 aa23.02■■□□□ 1.28
TRIM54-202ENST00000380075 UNGP13051 313 aaPredicted RBP23.02■■□□□ 1.28
TRIM54-202ENST00000380075 ZNF211Q13398 564 aaPredicted RBP23.02■■□□□ 1.28
TRIM54-202ENST00000380075 BIRC3Q13489 604 aa23.02■■□□□ 1.28
TRIM54-202ENST00000380075 TTMPQ5BVD1 217 aa23.02■■□□□ 1.28
TRIM54-202ENST00000380075 TCP11Q8WWU5 503 aa23.02■■□□□ 1.28
TRIM54-202ENST00000380075 KRT35Q92764 455 aa23.02■■□□□ 1.28
TRIM54-202ENST00000380075 CNOT8Q9UFF9 292 aaKnown RBP23.02■■□□□ 1.28
TRIM54-202ENST00000380075 ZNFX1Q9P2E3 1918 aaKnown RBP23.02■■□□□ 1.28
TRIM54-202ENST00000380075 TCF7P36402 384 aaPredicted RBP23.01■■□□□ 1.27
TRIM54-202ENST00000380075 ACOT2P49753 483 aa23.01■■□□□ 1.27
TRIM54-202ENST00000380075 SKOR1P84550 965 aa23.01■■□□□ 1.27
TRIM54-202ENST00000380075 CAPSQ13938 189 aa23.01■■□□□ 1.27
TRIM54-202ENST00000380075 IER5Q5VY09 327 aa23.01■■□□□ 1.27
TRIM54-202ENST00000380075 BBXQ8WY36 941 aaPredicted RBP23.01■■□□□ 1.27
TRIM54-202ENST00000380075 ERP44Q9BS26 406 aa23.01■■□□□ 1.27
TRIM54-202ENST00000380075 TARS2Q9BW92 718 aaKnown RBP23.01■■□□□ 1.27
TRIM54-202ENST00000380075 MTUS1Q9ULD2 1270 aa23.01■■□□□ 1.27
TRIM54-202ENST00000380075 ATMINO43313 823 aaPredicted RBP23.01■■□□□ 1.27
TRIM54-202ENST00000380075 ZNF467Q7Z7K2 595 aaPredicted RBP23.01■■□□□ 1.27
TRIM54-202ENST00000380075 PXYLP1Q8TE99 480 aa23.01■■□□□ 1.27
TRIM54-202ENST00000380075 ARL8AQ96BM9 186 aa23.01■■□□□ 1.27
TRIM54-202ENST00000380075 HAPLN2Q9GZV7 340 aa23.01■■□□□ 1.27
TRIM54-202ENST00000380075 PCYOX1Q9UHG3 505 aa23.01■■□□□ 1.27
TRIM54-202ENST00000380075 NR2E1Q9Y466 385 aa23.01■■□□□ 1.27
TRIM54-202ENST00000380075 LRRC37A2A6NM11 1700 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 LOC102724159A0A0B4J2E5 919 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 ERLIN2O94905 339 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 IGHA2P01877 340 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 RWDD2BP57060 319 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 TRIM32Q13049 653 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 CUL2Q13617 745 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 PWP2Q15269 919 aaKnown RBP23■■□□□ 1.27
TRIM54-202ENST00000380075 PKN2Q16513 984 aaKnown RBP23■■□□□ 1.27
TRIM54-202ENST00000380075 NAA35Q5VZE5 725 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 OLFML2BQ68BL8 750 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 DUPD1Q68J44 220 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 FBXO46Q6PJ61 603 aaPredicted RBP23■■□□□ 1.27
TRIM54-202ENST00000380075 DDX42Q86XP3 938 aaKnown RBP eCLIP23■■□□□ 1.27
TRIM54-202ENST00000380075 MCOLN2Q8IZK6 566 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 TINF2Q9BSI4 451 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 CELF4Q9BZC1 486 aaKnown RBP23■■□□□ 1.27
TRIM54-202ENST00000380075 PLAAQ9Y263 795 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 CNTNAP2Q9UHC6 1331 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 GOLGA6L10A6NI86 522 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 HMGB1P1B2RPK0 211 aaPredicted RBP23■■□□□ 1.27
TRIM54-202ENST00000380075 PODXLO00592 558 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 VNN1O95497 513 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 GRK4P32298 578 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 HSD17B3P37058 310 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 SLC1A1P43005 524 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 CENPCQ03188 943 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 MXD4Q14582 209 aaPredicted RBP23■■□□□ 1.27
TRIM54-202ENST00000380075 CYP1B1Q16678 543 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 EMC10Q5UCC4 262 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 MAMDC4Q6UXC1 1216 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 SH3TC2Q8TF17 1288 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 ZBTB45Q96K62 511 aaPredicted RBP23■■□□□ 1.27
TRIM54-202ENST00000380075 JPH2Q9BR39 696 aaPredicted RBP23■■□□□ 1.27
TRIM54-202ENST00000380075 MRPL4Q9BYD3 311 aaKnown RBP23■■□□□ 1.27
TRIM54-202ENST00000380075 ANKFY1Q9P2R3 1169 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 CNTN6Q9UQ52 1028 aa23■■□□□ 1.27
TRIM54-202ENST00000380075 LGR5O75473 907 aa22.99■■□□□ 1.27
TRIM54-202ENST00000380075 KRT14P02533 472 aa22.99■■□□□ 1.27
TRIM54-202ENST00000380075 CYP1A1P04798 512 aaPredicted RBP22.99■■□□□ 1.27
TRIM54-202ENST00000380075 CDCA2Q69YH5 1023 aaPredicted RBP22.99■■□□□ 1.27
TRIM54-202ENST00000380075 PLPPR4Q7Z2D5 763 aa22.99■■□□□ 1.27
TRIM54-202ENST00000380075 BRSK2Q8IWQ3 736 aa22.99■■□□□ 1.27
TRIM54-202ENST00000380075 SLAIN1Q8ND83 568 aa22.99■■□□□ 1.27
TRIM54-202ENST00000380075 CAPS2Q9BXY5 557 aa22.99■■□□□ 1.27
TRIM54-202ENST00000380075 NEUROG2Q9H2A3 272 aa22.99■■□□□ 1.27
TRIM54-202ENST00000380075 ERVK-5Q9HDB9 667 aa22.99■■□□□ 1.27
TRIM54-202ENST00000380075 BRCA2P51587 3418 aa22.99■■□□□ 1.27
TRIM54-202ENST00000380075 CLDN3O15551 220 aa22.98■■□□□ 1.27
TRIM54-202ENST00000380075 ACO1P21399 889 aaKnown RBP22.98■■□□□ 1.27
TRIM54-202ENST00000380075 MARCKSL1P49006 195 aa22.98■■□□□ 1.27
TRIM54-202ENST00000380075 LMBRD2Q68DH5 695 aaPredicted RBP22.98■■□□□ 1.27
TRIM54-202ENST00000380075 ARMCX2Q7L311 632 aa22.98■■□□□ 1.27
TRIM54-202ENST00000380075 SLC13A5Q86YT5 568 aaPredicted RBP22.98■■□□□ 1.27
TRIM54-202ENST00000380075 JAMLQ86YT9 394 aa22.98■■□□□ 1.27
TRIM54-202ENST00000380075 C2orf40Q9H1Z8 148 aa22.98■■□□□ 1.27
TRIM54-202ENST00000380075 ASB14A6NK59 587 aa22.98■■□□□ 1.27
TRIM54-202ENST00000380075 TOM1L1O75674 476 aa22.98■■□□□ 1.27
TRIM54-202ENST00000380075 SNAI1O95863 264 aaPredicted RBP22.98■■□□□ 1.27
TRIM54-202ENST00000380075 CLTAP09496 248 aa22.98■■□□□ 1.27
TRIM54-202ENST00000380075 NSFP46459 744 aaKnown RBP22.98■■□□□ 1.27
TRIM54-202ENST00000380075 WNT7BP56706 349 aa22.98■■□□□ 1.27
TRIM54-202ENST00000380075 SURF1Q15526 300 aa22.98■■□□□ 1.27
TRIM54-202ENST00000380075 TMC3Q7Z5M5 1100 aa22.98■■□□□ 1.27
TRIM54-202ENST00000380075 ZBTB8OSQ8IWT0 167 aa22.98■■□□□ 1.27
TRIM54-202ENST00000380075 PRELID2Q8N945 189 aa22.98■■□□□ 1.27
TRIM54-202ENST00000380075 VCPIP1Q96JH7 1222 aa22.98■■□□□ 1.27
TRIM54-202ENST00000380075 FMO2Q99518 471 aa22.98■■□□□ 1.27
TRIM54-202ENST00000380075 FAM129AQ9BZQ8 928 aa22.98■■□□□ 1.27
TRIM54-202ENST00000380075 IMPG2Q9BZV3 1241 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms