RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 DDR1Q08345 913 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 RC3H1Q5TC82 1133 aaKnown RBP12.04□□□□□ -0.48
SMAD9-202ENST00000379826 TMEM154Q6P9G4 183 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 ERICH1Q86X53 443 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 GRAMD1AQ96CP6 724 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 PGM2Q96G03 612 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 RBM41Q96IZ5 413 aaKnown RBP12.04□□□□□ -0.48
SMAD9-202ENST00000379826 TTC25Q96NG3 672 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 POLR3FQ9H1D9 316 aaPredicted RBP12.04□□□□□ -0.48
SMAD9-202ENST00000379826 MYLK2Q9H1R3 596 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 PIK3R2O00459 728 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 CCND2P30279 289 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 C11orf63Q6NUN7 778 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 RASGEF1CQ8N431 466 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 ATP6V0A1Q93050 837 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 FAF2Q96CS3 445 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 RPS6KC1Q96S38 1066 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 SLC13A1Q9BZW2 595 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 SMYD3Q9H7B4 428 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 CNOT7Q9UIV1 285 aaKnown RBP12.04□□□□□ -0.48
SMAD9-202ENST00000379826 NCANO14594 1321 aa12.04□□□□□ -0.48
SMAD9-202ENST00000379826 SIPA1L3O60292 1781 aaPredicted RBP12.03□□□□□ -0.48
SMAD9-202ENST00000379826 CPA2P48052 419 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 CRYMQ14894 314 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 SMTNL2Q2TAL5 461 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 PRELID2Q8N945 189 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 SPIRE2Q8WWL2 714 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 SREK1Q8WXA9 508 aaKnown RBP12.03□□□□□ -0.48
SMAD9-202ENST00000379826 KCNH7Q9NS40 1196 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 WHRNQ9P202 907 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 ANKRD63C9JTQ0 380 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 MEIS2O14770 477 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 SKIP12755 728 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 TMPRSS15P98073 1019 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 TAF1BQ53T94 588 aaPredicted RBP12.03□□□□□ -0.48
SMAD9-202ENST00000379826 SLC5A5Q92911 643 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 RMDN3Q96TC7 470 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 OSBPL8Q9BZF1 889 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 GTPBP10A4D1E9 387 aaKnown RBP12.03□□□□□ -0.48
SMAD9-202ENST00000379826 SLC1A1P43005 524 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 RNASELQ05823 741 aaKnown RBP12.03□□□□□ -0.48
SMAD9-202ENST00000379826 NR1H3Q13133 447 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 OTUD5Q96G74 571 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 RXFP1Q9HBX9 757 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 NINJ2Q9NZG7 142 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 IP6K2Q9UHH9 426 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 IQANK1A0A1B0GTG1 560 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 GJB6O95452 261 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 TNNC2P02585 160 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 ENO1P06733 434 aaKnown RBP12.03□□□□□ -0.48
SMAD9-202ENST00000379826 MARSP56192 900 aaKnown RBP12.03□□□□□ -0.48
SMAD9-202ENST00000379826 SYDE1Q6ZW31 735 aaPredicted RBP12.03□□□□□ -0.48
SMAD9-202ENST00000379826 SDCCAG8Q86SQ7 713 aaPredicted RBP12.03□□□□□ -0.48
SMAD9-202ENST00000379826 ARMC2Q8NEN0 867 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 PPP2R3CQ969Q6 453 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 OLFML3Q9NRN5 406 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 C15orf41Q9Y2V0 281 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 HIF1AQ16665 826 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 SPOPLQ6IQ16 392 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 ACER1Q8TDN7 264 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 FERMT1Q9BQL6 677 aa12.03□□□□□ -0.48
SMAD9-202ENST00000379826 SYNJ2BP-COX16A0A087WUM0 186 aa12.02□□□□□ -0.48
SMAD9-202ENST00000379826 COPEO14579 308 aa12.02□□□□□ -0.48
SMAD9-202ENST00000379826 VCAM1P19320 739 aa12.02□□□□□ -0.48
SMAD9-202ENST00000379826 PPP3CAQ08209 521 aa12.02□□□□□ -0.48
SMAD9-202ENST00000379826 FAM160B2Q86V87 743 aa12.02□□□□□ -0.48
SMAD9-202ENST00000379826 SYT17Q9BSW7 474 aa12.02□□□□□ -0.48
SMAD9-202ENST00000379826 COX16Q9P0S2 106 aa12.02□□□□□ -0.48
SMAD9-202ENST00000379826 TGFB1I1O43294 461 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 RNF8O76064 485 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 KRT4P19013 534 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 RRM1P23921 792 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 SEZ6Q53EL9 994 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 OTOP1Q7RTM1 612 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 PDIK1LQ8N165 341 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.02□□□□□ -0.49
SMAD9-202ENST00000379826 FEM1BQ9UK73 627 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 GTF3C4Q9UKN8 822 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 USP20Q9Y2K6 914 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 ZC3H4Q9UPT8 1303 aaKnown RBP12.02□□□□□ -0.49
SMAD9-202ENST00000379826 TTC4O95801 387 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 PSAPP07602 524 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 SAT1P21673 171 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 JAK3P52333 1124 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 JAM2P57087 298 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 PSMC5P62195 406 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 PPP2R5CQ13362 524 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 CYP4A22Q5TCH4 519 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 DCAF12L1Q5VU92 463 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 TAS1R2Q8TE23 839 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 CENPTQ96BT3 561 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 TTC1Q99614 292 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 MXRA8Q9BRK3 442 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 TMEM8AQ9HCN3 771 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 PARVAQ9NVD7 372 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 FBXO28Q9NVF7 368 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 MARCOQ9UEW3 520 aaPredicted RBP12.02□□□□□ -0.49
SMAD9-202ENST00000379826 TIAM2Q8IVF5 1701 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 WDR64B1ANS9 1081 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 SRGAP2CP0DJJ0 459 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms