RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 RIC8AQ9NPQ8 531 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 GEMIN8Q9NWZ8 242 aaKnown RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 GOLGA6L10A0A0M3HER8 536 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 A0A0U1RQJ8 604 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 F8W8V4 182 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 SLC9A3R1O14745 358 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 LRRN2O75325 713 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 ITGBL1O95965 494 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 GNGT1P63211 74 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 ARHGEF7Q14155 803 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 SLC39A5Q6ZMH5 540 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 OOSP2Q86WS3 158 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 TMTC1Q8IUR5 882 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 TAB3Q8N5C8 712 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-202ENST00000379446 USP38Q8NB14 1042 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 GDPD5Q8WTR4 605 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 MYOCQ99972 504 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 FAM49BQ9NUQ9 324 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 INTS13Q9NVM9 706 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 CA14Q9ULX7 337 aa6.95□□□□□ -1.3
NEDD9-202ENST00000379446 PP2D1A8MPX8 630 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 GRXCR1A8MXD5 290 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 ATP2A1O14983 1001 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 TBC1D12O60347 775 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 SRGAP2O75044 1071 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 MFAP3LO75121 409 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 CFHP08603 1231 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 UBA1P22314 1058 aaKnown RBP6.94□□□□□ -1.3
NEDD9-202ENST00000379446 HPDP32754 393 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-202ENST00000379446 USP11P51784 963 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 BPIFB4P59827 614 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 EARS2Q5JPH6 523 aaKnown RBP6.94□□□□□ -1.3
NEDD9-202ENST00000379446 TSTD1Q8NFU3 115 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 CASP10Q92851 521 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 KLF15Q9UIH9 416 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 CDC23Q9UJX2 597 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 STAP1Q9ULZ2 295 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 ADGRG1Q9Y653 693 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 CICQ96RK0 1608 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-202ENST00000379446 MYO7AQ13402 2215 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 PRRC2BQ5JSZ5 2229 aaKnown RBP6.94□□□□□ -1.3
NEDD9-202ENST00000379446 STK36Q9NRP7 1315 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 ACTN4O43707 911 aaKnown RBP6.94□□□□□ -1.3
NEDD9-202ENST00000379446 IFNB1P01574 187 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 RPN1P04843 607 aaKnown RBP6.94□□□□□ -1.3
NEDD9-202ENST00000379446 CD44P16070 742 aaKnown RBP6.94□□□□□ -1.3
NEDD9-202ENST00000379446 ACO1P21399 889 aaKnown RBP6.94□□□□□ -1.3
NEDD9-202ENST00000379446 MLH1P40692 756 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 MTHFRP42898 656 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 FXR1P51114 621 aaKnown RBP eCLIP6.94□□□□□ -1.3
NEDD9-202ENST00000379446 GTF2H3Q13889 308 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 HLTFQ14527 1009 aaKnown RBP eCLIP6.94□□□□□ -1.32e-7■□□□□ 10.4
NEDD9-202ENST00000379446 CASP8Q14790 479 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 ZNF746Q6NUN9 644 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-202ENST00000379446 TRIM65Q6PJ69 517 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 TPGS1Q6ZTW0 290 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 SLC24A5Q71RS6 500 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 SCG3Q8WXD2 468 aaKnown RBP6.94□□□□□ -1.3
NEDD9-202ENST00000379446 KIAA1586Q9HCI6 787 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 HEMK1Q9Y5R4 338 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-202ENST00000379446 CYB561D2O14569 222 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 GCKP35557 465 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 CYLC1P35663 651 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-202ENST00000379446 PSMC2P35998 433 aaKnown RBP6.94□□□□□ -1.3
NEDD9-202ENST00000379446 STAT1P42224 750 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 ALX1Q15699 326 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 PFKFB3Q16875 520 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-202ENST00000379446 SEZ6Q53EL9 994 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 PPP6R3Q5H9R7 873 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-202ENST00000379446 THEMIS2Q5TEJ8 643 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 POF1BQ8WVV4 589 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 GSDMAQ96QA5 445 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 SNTG2Q9NY99 539 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 PADI3Q9ULW8 664 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 TFR2Q9UP52 801 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 PCDHB5Q9Y5E4 795 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 MRFAP1Q9Y605 127 aa6.94□□□□□ -1.3
NEDD9-202ENST00000379446 TREHO43280 583 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 HIP1RO75146 1068 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 HDCP19113 662 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 SCP2P22307 547 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 TM4SF4P48230 202 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 MFAP3P55082 362 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 SLC20A2Q08357 652 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 GRSF1Q12849 480 aaKnown RBP eCLIP6.93□□□□□ -1.3
NEDD9-202ENST00000379446 PABPC1LQ4VXU2 614 aaKnown RBP6.93□□□□□ -1.3
NEDD9-202ENST00000379446 TMEM31Q5JXX7 168 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 KIAA1755Q5JYT7 1200 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 MFSD4BQ5TF39 518 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 MAATS1Q7Z4T9 603 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 MAP7D3Q8IWC1 876 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 KIFC3Q9BVG8 833 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 SP110Q9HB58 689 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 BARHL2Q9NY43 387 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 CLCA2Q9UQC9 943 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 M0QYV0 167 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 PIK3R2O00459 728 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 SLC11A2P49281 568 aa6.93□□□□□ -1.3
NEDD9-202ENST00000379446 CDK17Q00537 523 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms