RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 KRT28Q7Z3Y7 464 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 POU5F2Q8N7G0 328 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 PRELID2Q8N945 189 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 HES6Q96HZ4 224 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 GREM2Q9H772 168 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 PARVBQ9HBI1 364 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 ATP11BQ9Y2G3 1177 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 ATMINO43313 823 aaPredicted RBP11.54□□□□□ -0.56
USP6NL-202ENST00000379237 RNASEH1O60930 286 aaKnown RBP11.54□□□□□ -0.56
USP6NL-202ENST00000379237 S100A1P23297 94 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 BCAMP50895 628 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 OXCT1P55809 520 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 FOLH1Q04609 750 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 PDAP1Q13442 181 aaKnown RBP11.54□□□□□ -0.56
USP6NL-202ENST00000379237 GIT2Q14161 759 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 PDIA6Q15084 440 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 ATG16L1Q676U5 607 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 KLHDC10Q6PID8 442 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 ZDHHC24Q6UX98 284 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 ZBTB46Q86UZ6 589 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 FAM136AQ96C01 138 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 ZSWIM1Q9BR11 485 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 TMEM109Q9BVC6 243 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 TAS2R1Q9NYW7 299 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 DMTF1Q9Y222 760 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 TMED5Q9Y3A6 229 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 COPEO14579 308 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 PABPC4LP0CB38 370 aaKnown RBP11.53□□□□□ -0.56
USP6NL-202ENST00000379237 NPEPPSP55786 919 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 C21orf59P57076 290 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 PRAMEP78395 509 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 SYDE2Q5VT97 1194 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 NRG4Q8WWG1 115 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 KRT35Q92764 455 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 CPVLQ9H3G5 476 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 UBE2TQ9NPD8 197 aaPredicted RBP11.53□□□□□ -0.56
USP6NL-202ENST00000379237 PSMC3IPQ9P2W1 217 aaPredicted RBP11.53□□□□□ -0.56
USP6NL-202ENST00000379237 KLRF2D3W0D1 207 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 SGK1O00141 431 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 ESRRBO95718 433 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 OAS1P00973 400 aaKnown RBP11.53□□□□□ -0.56
USP6NL-202ENST00000379237 FAM58BPP0C7Q3 252 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 RAG1P15918 1043 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 LRRC57Q8N9N7 239 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 GLIS3Q8NEA6 775 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 RFWD2Q8NHY2 731 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 ZNF564Q8TBZ8 553 aaPredicted RBP11.53□□□□□ -0.56
USP6NL-202ENST00000379237 PPP4R1Q8TF05 950 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 OXNAD1Q96HP4 312 aaPredicted RBP11.53□□□□□ -0.56
USP6NL-202ENST00000379237 WHRNQ9P202 907 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 PCDHA6Q9UN73 950 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 APOBEC2Q9Y235 224 aaKnown RBP11.53□□□□□ -0.56
USP6NL-202ENST00000379237 PCDHA8Q9Y5H6 950 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 MROH7Q68CQ1 1323 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 PNPLA7Q6ZV29 1317 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 A0A0A6YYK5 440 aaPredicted RBP11.53□□□□□ -0.56
USP6NL-202ENST00000379237 POTEFA5A3E0 1075 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 HALP42357 657 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 CDK16Q00536 496 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 PABPC4Q13310 644 aaKnown RBP eCLIP11.53□□□□□ -0.56
USP6NL-202ENST00000379237 LGSNQ5TDP6 509 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 PLEKHA7Q6IQ23 1121 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 PPM1KQ8N3J5 372 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 NUP85Q9BW27 656 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 SATB2Q9UPW6 733 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 DNM3Q9UQ16 869 aa11.53□□□□□ -0.56
USP6NL-202ENST00000379237 NIP7Q9Y221 180 aaKnown RBP eCLIP11.53□□□□□ -0.56
USP6NL-202ENST00000379237 E9PMD0 336 aa11.52□□□□□ -0.56
USP6NL-202ENST00000379237 STARD3NLO95772 234 aa11.52□□□□□ -0.56
USP6NL-202ENST00000379237 CDH3P22223 829 aa11.52□□□□□ -0.56
USP6NL-202ENST00000379237 PABPC1LQ4VXU2 614 aaKnown RBP11.52□□□□□ -0.56
USP6NL-202ENST00000379237 NET1Q7Z628 596 aaPredicted RBP11.52□□□□□ -0.56
USP6NL-202ENST00000379237 PRUNE1Q86TP1 453 aa11.52□□□□□ -0.56
USP6NL-202ENST00000379237 DGKHQ86XP1 1220 aa11.52□□□□□ -0.56
USP6NL-202ENST00000379237 MYCT1Q8N699 235 aa11.52□□□□□ -0.56
USP6NL-202ENST00000379237 GSTCDQ8NEC7 633 aa11.52□□□□□ -0.56
USP6NL-202ENST00000379237 CNGB3Q9NQW8 809 aa11.52□□□□□ -0.56
USP6NL-202ENST00000379237 HERC5Q9UII4 1024 aaKnown RBP11.52□□□□□ -0.56
USP6NL-202ENST00000379237 NEU2Q9Y3R4 380 aa11.52□□□□□ -0.56
USP6NL-202ENST00000379237 FAM205AQ6ZU69 1335 aa11.52□□□□□ -0.56
USP6NL-202ENST00000379237 CNTNAP5Q8WYK1 1306 aa11.52□□□□□ -0.56
USP6NL-202ENST00000379237 PLA2G4BP0C869 781 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 SPATA31D3P0C874 917 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 POTEIP0CG38 1075 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 DYNLL1P63167 89 aaKnown RBP11.52□□□□□ -0.57
USP6NL-202ENST00000379237 MYL7Q01449 175 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 BFSP1Q12934 665 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 MPP2Q14168 576 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 USH1GQ495M9 461 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 SPATA31D4Q6ZUB0 917 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 ULK2Q8IYT8 1036 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 ALG3Q92685 438 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 FAM111AQ96PZ2 611 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 FHDC1Q9C0D6 1143 aaPredicted RBP11.52□□□□□ -0.57
USP6NL-202ENST00000379237 TMOD3Q9NYL9 352 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 C2orf71A6NGG8 1288 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 PON1P27169 355 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 ARL1P40616 181 aaPredicted RBP11.52□□□□□ -0.57
USP6NL-202ENST00000379237 AQP4P55087 323 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 MECOMQ03112 1051 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms