RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 ITGA4P13612 1032 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 HUNKP57058 714 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 CACNB2Q08289 660 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-203ENST00000378169 LY6KQ17RY6 165 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 MUM1Q2TAK8 710 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 ACAD10Q6JQN1 1059 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 SLC13A5Q86YT5 568 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-203ENST00000378169 IL31RAQ8NI17 732 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 GSDMBQ8TAX9 411 aa13.94□□□□□ -0.18
NPHP4-203ENST00000378169 CYP2C19P33261 490 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 THOC5Q13769 683 aaKnown RBP13.93□□□□□ -0.18
NPHP4-203ENST00000378169 BYSLQ13895 437 aaKnown RBP13.93□□□□□ -0.18
NPHP4-203ENST00000378169 KCNT1Q5JUK3 1230 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 AMIGO3Q86WK7 504 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 SPATA20Q8TB22 786 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 KAT5Q92993 513 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 HPDLQ96IR7 371 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 SPATC1LQ9H0A9 340 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 ISCUQ9H1K1 167 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 RAB6BQ9NRW1 208 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 KLK14Q9P0G3 267 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 INTUQ9ULD6 942 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 SIK3Q9Y2K2 1263 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 RBP3P10745 1247 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 MUTP22033 750 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 TPD52P55327 224 aaPredicted RBP13.93□□□□□ -0.18
NPHP4-203ENST00000378169 SNRPFP62306 86 aaKnown RBP13.93□□□□□ -0.18
NPHP4-203ENST00000378169 KIZQ2M2Z5 673 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 C9orf131Q5VYM1 1079 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 WDR59Q6PJI9 974 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 RYBPQ8N488 228 aaPredicted RBP13.93□□□□□ -0.18
NPHP4-203ENST00000378169 TRAPPC12Q8WVT3 735 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 AGAP3Q96P47 875 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 ZSWIM1Q9BR11 485 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 TRAIPQ9BWF2 469 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 VPS11Q9H270 941 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 AIPL1Q9NZN9 384 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 KCNN4O15554 427 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 KRT10P13645 584 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 DSG3P32926 999 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 SESN2P58004 480 aaPredicted RBP13.93□□□□□ -0.18
NPHP4-203ENST00000378169 WDR93Q6P2C0 686 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 PID1Q7Z2X4 250 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 MYLK4Q86YV6 388 aaPredicted RBP13.93□□□□□ -0.18
NPHP4-203ENST00000378169 IRF2BP1Q8IU81 584 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 PDCD7Q8N8D1 485 aaKnown RBP13.93□□□□□ -0.18
NPHP4-203ENST00000378169 ATP11CQ8NB49 1132 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 FEZF2Q8TBJ5 459 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 SKA2Q8WVK7 121 aaPredicted RBP13.93□□□□□ -0.18
NPHP4-203ENST00000378169 CHMP6Q96FZ7 201 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 NT5C1AQ9BXI3 368 aa13.93□□□□□ -0.18
NPHP4-203ENST00000378169 DDX3XO00571 662 aaKnown RBP eCLIP13.92□□□□□ -0.184e-6■■■■■ 29.2
NPHP4-203ENST00000378169 ADAMTS3O15072 1205 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 VTNP04004 478 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 MDH1P40925 334 aaKnown RBP13.92□□□□□ -0.18
NPHP4-203ENST00000378169 NAMPTP43490 491 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 ZNF157P51786 506 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-203ENST00000378169 MIIPQ5JXC2 388 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 RCOR2Q8IZ40 523 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 BBS5Q8N3I7 341 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 HDAC11Q96DB2 347 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 ZBTB45Q96K62 511 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-203ENST00000378169 ZNF560Q96MR9 790 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 TTC25Q96NG3 672 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 PHF20L1A8MW92 1017 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 KRT38O76015 456 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 ITGB5P18084 799 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 TAP1Q03518 808 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 MEA1Q16626 185 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 C1orf186Q6ZWK4 172 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 TADA2BQ86TJ2 420 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 C4orf33Q8N1A6 199 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 FBXO25Q8TCJ0 367 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 ARL8AQ96BM9 186 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 ATXN7L3BQ96GX2 97 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 TNIP3Q96KP6 325 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 TGS1Q96RS0 853 aaKnown RBP13.92□□□□□ -0.18
NPHP4-203ENST00000378169 P2RX7Q99572 595 aaKnown RBP13.92□□□□□ -0.18
NPHP4-203ENST00000378169 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-203ENST00000378169 RCCD1A6NED2 376 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 ADM5C9JUS6 153 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 ASAP2O43150 1006 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 MYL6P60660 151 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 CYP24A1Q07973 514 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 ARHGEF19Q8IW93 802 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 SPATA18Q8TC71 538 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 MAP3K20Q9NYL2 800 aaKnown RBP13.92□□□□□ -0.18
NPHP4-203ENST00000378169 NEU2Q9Y3R4 380 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 FRMPD4Q14CM0 1322 aa13.92□□□□□ -0.18
NPHP4-203ENST00000378169 ARHGEF37A1IGU5 675 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 CCDC78A2IDD5 438 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 PSMD10O75832 226 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 KITP10721 976 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 GARTP22102 1010 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 HSD17B3P37058 310 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 IRAK1P51617 712 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 MAPK7Q13164 816 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 PIGHQ14442 188 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-203ENST00000378169 KCTD19Q17RG1 926 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-203ENST00000378169 EFHC2Q5JST6 749 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms