RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 TGS1Q96RS0 853 aaKnown RBP15.84■□□□□ 0.13
NPHP4-201ENST00000378156 TRIM55Q9BYV6 548 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 ARMC2Q8NEN0 867 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 PNMA5Q96PV4 448 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 FAM96AQ9H5X1 160 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.84■□□□□ 0.13
NPHP4-201ENST00000378156 ARP10275 920 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 EEF1DP29692 281 aaKnown RBP15.84■□□□□ 0.13
NPHP4-201ENST00000378156 SHMT1P34896 483 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 DRP2Q13474 957 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 LAMC2Q13753 1193 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 EPC2Q52LR7 807 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 ERO1BQ86YB8 467 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 MTMR8Q96EF0 704 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 THAP2Q9H0W7 228 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 UPF3AQ9H1J1 476 aaKnown RBP15.84■□□□□ 0.13
NPHP4-201ENST00000378156 ZFYVE28Q9HCC9 887 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 ZNF446Q9NWS9 450 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 GGT7Q9UJ14 662 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 HOXA10P31260 410 aaPredicted RBP15.84■□□□□ 0.13
NPHP4-201ENST00000378156 PDIA2Q13087 525 aaKnown RBP15.84■□□□□ 0.13
NPHP4-201ENST00000378156 GRAMD1BQ3KR37 738 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 ARL8AQ96BM9 186 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 ADAM33Q9BZ11 813 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 KCND1Q9NSA2 647 aa15.84■□□□□ 0.13
NPHP4-201ENST00000378156 COPEO14579 308 aa15.83■□□□□ 0.13
NPHP4-201ENST00000378156 PRLRP16471 622 aa15.83■□□□□ 0.13
NPHP4-201ENST00000378156 EVX2Q03828 476 aa15.83■□□□□ 0.13
NPHP4-201ENST00000378156 ART3Q13508 389 aa15.83■□□□□ 0.13
NPHP4-201ENST00000378156 ELMSAN1Q6PJG2 1045 aa15.83■□□□□ 0.13
NPHP4-201ENST00000378156 PIP4K2CQ8TBX8 421 aa15.83■□□□□ 0.13
NPHP4-201ENST00000378156 TRAIPQ9BWF2 469 aa15.83■□□□□ 0.13
NPHP4-201ENST00000378156 DBR1Q9UK59 544 aaKnown RBP15.83■□□□□ 0.13
NPHP4-201ENST00000378156 FER1L4A9Z1Z3 1794 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 LRRC10BA6NIK2 292 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 GYG2O15488 501 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 AKAP3O75969 853 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 CTSHP09668 335 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 CYP2C9P11712 490 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 CHN1P15882 459 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 NBPF12Q5TAG4 269 aaPredicted RBP15.83■□□□□ 0.12
NPHP4-201ENST00000378156 FBXW10Q5XX13 1052 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 ZC3H18Q86VM9 953 aaKnown RBP15.83■□□□□ 0.12
NPHP4-201ENST00000378156 ATL2Q8NHH9 583 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 ZC3H15Q8WU90 426 aaKnown RBP15.83■□□□□ 0.12
NPHP4-201ENST00000378156 ERP44Q9BS26 406 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 FSD1LQ9BXM9 530 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 SIK2Q9H0K1 926 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 EXTL3O43909 919 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 PAMP19021 973 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 TCF7P36402 384 aaPredicted RBP15.83■□□□□ 0.12
NPHP4-201ENST00000378156 NOP14P78316 857 aaKnown RBP15.83■□□□□ 0.12
NPHP4-201ENST00000378156 PRMT1Q99873 361 aaKnown RBP15.83■□□□□ 0.12
NPHP4-201ENST00000378156 FAM118BQ9BPY3 351 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 KCNH4Q9UQ05 1017 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 KDM4FA0A1W2PPD8 638 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 GNGT2O14610 69 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 PSMC6P62333 389 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 ROR1Q01973 937 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 TMEM62Q0P6H9 643 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 LONRF1Q17RB8 773 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 KLHL38Q2WGJ6 581 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 TAF1BQ53T94 588 aaPredicted RBP15.83■□□□□ 0.12
NPHP4-201ENST00000378156 SAMD3Q8N6K7 520 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 TBX20Q9UMR3 447 aa15.83■□□□□ 0.12
NPHP4-201ENST00000378156 FOXN3O00409 490 aaPredicted RBP15.82■□□□□ 0.12
NPHP4-201ENST00000378156 LCP1P13796 627 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 PDGFRAP16234 1089 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 MUTP22033 750 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 HSD17B3P37058 310 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 C9orf72Q96LT7 481 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 TMEM117Q9H0C3 514 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 H3BRJ5 948 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 IL18RAPO95256 599 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 ZFXP17010 805 aaPredicted RBP15.82■□□□□ 0.12
NPHP4-201ENST00000378156 ARSEP51690 589 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 SLC30A10Q6XR72 485 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 ZNF571Q7Z3V5 609 aaPredicted RBP15.82■□□□□ 0.12
NPHP4-201ENST00000378156 CDKL3Q8IVW4 592 aaPredicted RBP15.82■□□□□ 0.12
NPHP4-201ENST00000378156 AFG1LQ8WV93 481 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 PI4K2AQ9BTU6 479 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 ADARB2Q9NS39 739 aaKnown RBP15.82■□□□□ 0.12
NPHP4-201ENST00000378156 BFARQ9NZS9 450 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 DCTN4Q9UJW0 460 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 INTUQ9ULD6 942 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 MOCS2O96007 188 aaPredicted RBP15.82■□□□□ 0.12
NPHP4-201ENST00000378156 CPB1P15086 417 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 TAL1P17542 331 aaPredicted RBP15.82■□□□□ 0.12
NPHP4-201ENST00000378156 DDR1Q08345 913 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 BTBD8Q5XKL5 378 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 KLC3Q6P597 504 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 PARP9Q8IXQ6 854 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 APPL2Q8NEU8 664 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 TRIM62Q9BVG3 475 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 KIFC3Q9BVG8 833 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 BLOC1S4Q9NUP1 217 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 RAB21Q9UL25 225 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 WNT7AO00755 349 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 TRAPPC3O43617 180 aa15.82■□□□□ 0.12
NPHP4-201ENST00000378156 VCAM1P19320 739 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms