RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 AAASQ9NRG9 546 aa17.65■□□□□ 0.42
PCDHA1-201ENST00000378133 NKIRAS1Q9NYS0 192 aa17.65■□□□□ 0.42
PCDHA1-201ENST00000378133 TBX20Q9UMR3 447 aa17.65■□□□□ 0.42
PCDHA1-201ENST00000378133 USP20Q9Y2K6 914 aa17.65■□□□□ 0.42
PCDHA1-201ENST00000378133 UBIAD1Q9Y5Z9 338 aa17.65■□□□□ 0.42
PCDHA1-201ENST00000378133 CNTNAP1P78357 1384 aa17.65■□□□□ 0.42
PCDHA1-201ENST00000378133 ATP9AO75110 1047 aa17.64■□□□□ 0.42
PCDHA1-201ENST00000378133 EIF2AK2P19525 551 aaKnown RBP17.64■□□□□ 0.42
PCDHA1-201ENST00000378133 CALB2P22676 271 aa17.64■□□□□ 0.42
PCDHA1-201ENST00000378133 CTCFP49711 727 aaPredicted RBP17.64■□□□□ 0.42
PCDHA1-201ENST00000378133 NCKAP1LP55160 1127 aa17.64■□□□□ 0.42
PCDHA1-201ENST00000378133 PHLDB2Q86SQ0 1253 aa17.64■□□□□ 0.42
PCDHA1-201ENST00000378133 GRAMD1AQ96CP6 724 aa17.64■□□□□ 0.42
PCDHA1-201ENST00000378133 IRAK4Q9NWZ3 460 aa17.64■□□□□ 0.42
PCDHA1-201ENST00000378133 UVRAGQ9P2Y5 699 aa17.64■□□□□ 0.42
PCDHA1-201ENST00000378133 TBK1Q9UHD2 729 aa17.64■□□□□ 0.42
PCDHA1-201ENST00000378133 DPPA5A6NC42 116 aa17.64■□□□□ 0.41
PCDHA1-201ENST00000378133 GRIN3BO60391 1043 aa17.64■□□□□ 0.41
PCDHA1-201ENST00000378133 AP1G2O75843 785 aa17.64■□□□□ 0.41
PCDHA1-201ENST00000378133 PCK1P35558 622 aa17.64■□□□□ 0.41
PCDHA1-201ENST00000378133 RAD23BP54727 409 aa17.64■□□□□ 0.41
PCDHA1-201ENST00000378133 ACVR2BQ13705 512 aa17.64■□□□□ 0.41
PCDHA1-201ENST00000378133 KYNUQ16719 465 aa17.64■□□□□ 0.41
PCDHA1-201ENST00000378133 ACAD10Q6JQN1 1059 aa17.64■□□□□ 0.41
PCDHA1-201ENST00000378133 PSPC1Q8WXF1 523 aaKnown RBP17.64■□□□□ 0.41
PCDHA1-201ENST00000378133 DDX1Q92499 740 aaKnown RBP17.64■□□□□ 0.41
PCDHA1-201ENST00000378133 FAM84AQ96KN4 292 aa17.64■□□□□ 0.41
PCDHA1-201ENST00000378133 NT5C1BQ96P26 610 aa17.64■□□□□ 0.41
PCDHA1-201ENST00000378133 IWS1Q96ST2 819 aa17.64■□□□□ 0.41
PCDHA1-201ENST00000378133 LRRC19Q9H756 370 aa17.64■□□□□ 0.41
PCDHA1-201ENST00000378133 DNAJC17Q9NVM6 304 aaKnown RBP17.64■□□□□ 0.41
PCDHA1-201ENST00000378133 RAB20Q9NX57 234 aa17.64■□□□□ 0.41
PCDHA1-201ENST00000378133 ZMYND8Q9ULU4 1186 aaPredicted RBP17.64■□□□□ 0.41
PCDHA1-201ENST00000378133 TP73O15350 636 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 LYPLA2O95372 231 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 TTC4O95801 387 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 MYCLP12524 364 aaPredicted RBP17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 CHKAP35790 457 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 SETDB1Q15047 1291 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 PARP6Q2NL67 630 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 SGO2Q562F6 1265 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 ANO7Q6IWH7 933 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 FAM47EQ6ZV65 393 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 TAAR1Q96RJ0 339 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 PI4K2AQ9BTU6 479 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 MYLK2Q9H1R3 596 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 TMEM8AQ9HCN3 771 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 NEFHP12036 1026 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 KRT5P13647 590 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 GPC3P51654 580 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 KRT17Q04695 432 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 RBBP5Q15291 538 aaKnown RBP17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 PCNX4Q63HM2 1172 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 SEPT14Q6ZU15 432 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 NIPA1Q7RTP0 329 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 CYP4X1Q8N118 509 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 TMEM161BQ8NDZ6 487 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 FBXL13Q8NEE6 735 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 ATG4AQ8WYN0 398 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 RAVER2Q9HCJ3 691 aaKnown RBP17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 CHST7Q9NS84 486 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 WHRNQ9P202 907 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 ASIC3Q9UHC3 531 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 ANAPC7Q9UJX3 599 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 COQ4Q9Y3A0 265 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 DENND3A2RUS2 1198 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 FSCN2O14926 492 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 ATP5HO75947 161 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 TAC1P20366 129 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 NPTX2P47972 431 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 SOX10P56693 466 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 SNRPFP62306 86 aaKnown RBP17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 RNASELQ05823 741 aaKnown RBP17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 STRN3Q13033 797 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 TRIP13Q15645 432 aaPredicted RBP17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 RSBN1LQ6PCB5 846 aaPredicted RBP17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 SV2AQ7L0J3 742 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 CCDC125Q86Z20 511 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 LMNTD2Q8IXW0 634 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 C4orf19Q8IY42 314 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 SRRM1Q8IYB3 904 aaKnown RBP17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 C12orf50Q8NA57 414 aaPredicted RBP17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 SYTL5Q8TDW5 730 aaPredicted RBP17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 STK32AQ8WU08 396 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 TMEM237Q96Q45 408 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 ZNF341Q9BYN7 854 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 TBC1D22BQ9NU19 505 aa17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 SCAF8Q9UPN6 1271 aaKnown RBP17.63■□□□□ 0.41
PCDHA1-201ENST00000378133 E7ENQ6 273 aa17.62■□□□□ 0.41
PCDHA1-201ENST00000378133 FESP07332 822 aa17.62■□□□□ 0.41
PCDHA1-201ENST00000378133 MAPK4P31152 587 aa17.62■□□□□ 0.41
PCDHA1-201ENST00000378133 C2CD6Q53TS8 623 aa17.62■□□□□ 0.41
PCDHA1-201ENST00000378133 KIFAP3Q92845 792 aa17.62■□□□□ 0.41
PCDHA1-201ENST00000378133 ERP27Q96DN0 273 aa17.62■□□□□ 0.41
PCDHA1-201ENST00000378133 PAIP2Q9BPZ3 127 aaKnown RBP17.62■□□□□ 0.41
PCDHA1-201ENST00000378133 LRMDAQ9H2I8 198 aa17.62■□□□□ 0.41
PCDHA1-201ENST00000378133 CYP39A1Q9NYL5 469 aa17.62■□□□□ 0.41
PCDHA1-201ENST00000378133 HAO1Q9UJM8 370 aa17.62■□□□□ 0.41
PCDHA1-201ENST00000378133 EXOC7Q9UPT5 735 aa17.62■□□□□ 0.41
PCDHA1-201ENST00000378133 ZNFX1Q9P2E3 1918 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms