RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 HAUS6Q7Z4H7 955 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 KIAA2013Q8IYS2 634 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 C7orf25Q9BPX7 421 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 SPON2Q9BUD6 331 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 ALKQ9UM73 1620 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 LRG1P02750 347 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 PLA2G4AP47712 749 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 NYAP1Q6ZVC0 841 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 DNAJC9Q8WXX5 260 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 ARHGAP26Q9UNA1 814 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 USP42Q9H9J4 1324 aaKnown RBP12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 SLC1A1P43005 524 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 PHKA2P46019 1235 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 RCOR2Q8IZ40 523 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 SH3TC2Q8TF17 1288 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 TRIM9Q9C026 710 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 TMEM117Q9H0C3 514 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 EML4Q9HC35 981 aaKnown RBP12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 RGL1Q9NZL6 768 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 APEX2Q9UBZ4 518 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 CCT8L1PA6NM43 557 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 E5RI56 91 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 CARSP49589 748 aaKnown RBP12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 KPNA1P52294 538 aaPredicted RBP12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 VPS72Q15906 364 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 TRIM72Q6ZMU5 477 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 DDX42Q86XP3 938 aaKnown RBP eCLIP12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 MARCOQ9UEW3 520 aaPredicted RBP12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 TEKT2Q9UIF3 430 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 ZC3H4Q9UPT8 1303 aaKnown RBP12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 RGL2O15211 777 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 ADCK2Q7Z695 626 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 NOA1Q8NC60 698 aaKnown RBP12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 BEST2Q8NFU1 509 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 IGDCC4Q8TDY8 1250 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 ERP27Q96DN0 273 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 TMA16Q96EY4 203 aaKnown RBP12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 PNKPQ96T60 521 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 FHOD1Q9Y613 1164 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 ATMINO43313 823 aaPredicted RBP12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 THPOP40225 353 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 CENPAP49450 140 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 LBRQ14739 615 aaKnown RBP12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 ADNPQ9H2P0 1102 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 HSPBP1Q9NZL4 362 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 SUPT3HB4E1H0 165 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 HUS1O60921 280 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 EYA4O95677 639 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 CYBBP04839 570 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 ASIC4Q96FT7 647 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 ACAP3Q96P50 834 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 GAS2L1Q99501 681 aaPredicted RBP12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 CD209Q9NNX6 404 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 ORC4O43929 436 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 NFKBIAP25963 317 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 KRT76Q01546 638 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 MED21Q13503 144 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 PGBD4Q96DM1 585 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 MRPL4Q9BYD3 311 aaKnown RBP12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 STK33Q9BYT3 514 aa12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 AGO2Q9UKV8 859 aaKnown RBP12.59□□□□□ -0.39
PCDHA9-201ENST00000378122 UBA6A0AVT1 1052 aaPredicted RBP12.58□□□□□ -0.39
PCDHA9-201ENST00000378122 PDXKO00764 312 aa12.58□□□□□ -0.39
PCDHA9-201ENST00000378122 WEE1P30291 646 aa12.58□□□□□ -0.39
PCDHA9-201ENST00000378122 YWHABP31946 246 aaKnown RBP12.58□□□□□ -0.39
PCDHA9-201ENST00000378122 TAP1Q03518 808 aa12.58□□□□□ -0.39
PCDHA9-201ENST00000378122 REEP2Q9BRK0 252 aa12.58□□□□□ -0.39
PCDHA9-201ENST00000378122 NOD2Q9HC29 1040 aa12.58□□□□□ -0.39
PCDHA9-201ENST00000378122 SENP2Q9HC62 589 aa12.58□□□□□ -0.39
PCDHA9-201ENST00000378122 SULT1E1P49888 294 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 NT5C2P49902 561 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 GTF2A2P52657 109 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 MDM1Q8TC05 714 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 NAF1Q96HR8 494 aaKnown RBP12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 DACH2Q96NX9 599 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 SIK2Q9H0K1 926 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 ASCC2Q9H1I8 757 aaPredicted RBP12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 MYOZ2Q9NPC6 264 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 NEU2Q9Y3R4 380 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 CEP152O94986 1710 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 RHOBTB3O94955 611 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 IL10P22301 178 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 SFNP31947 248 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 USP11P51784 963 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 NAB2Q15742 525 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 EFHC2Q5JST6 749 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 ENOSF1Q7L5Y1 443 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 GIMAP8Q8ND71 665 aaPredicted RBP12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 GPRC5AQ8NFJ5 357 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 RFWD2Q8NHY2 731 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 PNMA5Q96PV4 448 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 DDX28Q9NUL7 540 aaKnown RBP12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 PCMTD2Q9NV79 361 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 SMG5Q9UPR3 1016 aaKnown RBP12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 PNPLA7Q6ZV29 1317 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 MYMKA6NI61 221 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 ASB14A6NK59 587 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 CACUL1Q86Y37 369 aa12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 RBM15Q96T37 977 aaKnown RBP eCLIP12.58□□□□□ -0.4
PCDHA9-201ENST00000378122 SP110Q9HB58 689 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms