RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 APEX2Q9UBZ4 518 aa13.94□□□□□ -0.18
CBWD3-203ENST00000377344 TTC3P53804 2025 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 TBKBP1A7MCY6 615 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 NOL4O94818 638 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 UCHL3P15374 230 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 NOP14P78316 857 aaKnown RBP13.93□□□□□ -0.18
CBWD3-203ENST00000377344 GOLGA8FQ08AF8 430 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 GOLGA8DPQ0D2H9 430 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 MYO1EQ12965 1108 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 PAN2Q504Q3 1202 aaKnown RBP13.93□□□□□ -0.18
CBWD3-203ENST00000377344 TMEM240Q5SV17 173 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 C9orf57Q5W0N0 161 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 ARHGEF19Q8IW93 802 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 CRIPAKQ8N1N5 446 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 RABGGTAQ92696 567 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 TATDN2Q93075 761 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 HPDLQ96IR7 371 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 GANQ9H2C0 597 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 TBC1D13Q9NVG8 400 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 CEP72Q9P209 647 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 NXF1Q9UBU9 619 aaKnown RBP13.93□□□□□ -0.18
CBWD3-203ENST00000377344 DNAJC12Q9UKB3 198 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 FHOD1Q9Y613 1164 aa13.93□□□□□ -0.18
CBWD3-203ENST00000377344 PPEF2O14830 753 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 ZC3H11AO75152 810 aaKnown RBP eCLIP13.92□□□□□ -0.18
CBWD3-203ENST00000377344 ASS1P00966 412 aaKnown RBP13.92□□□□□ -0.18
CBWD3-203ENST00000377344 ATICP31939 592 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 FXR1P51114 621 aaKnown RBP eCLIP13.92□□□□□ -0.18
CBWD3-203ENST00000377344 CLCNKBP51801 687 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 ADKP55263 362 aaKnown RBP13.92□□□□□ -0.18
CBWD3-203ENST00000377344 TUSC3Q13454 348 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 NAB2Q15742 525 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 ARHGAP44Q17R89 818 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 WDR72Q3MJ13 1102 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 FIGNQ5HY92 759 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 ZNF397Q8NF99 534 aaPredicted RBP13.92□□□□□ -0.18
CBWD3-203ENST00000377344 CXorf38Q8TB03 319 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 TOP1MTQ969P6 601 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 IQCDQ96DY2 449 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 CASD1Q96PB1 797 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 SPAG5Q96R06 1193 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 LUC7L2Q9Y383 392 aaKnown RBP13.92□□□□□ -0.18
CBWD3-203ENST00000377344 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.92□□□□□ -0.18
CBWD3-203ENST00000377344 TDRD15B5MCY1 1934 aaKnown RBP13.92□□□□□ -0.18
CBWD3-203ENST00000377344 AKR1B15C9JRZ8 316 aaPredicted RBP13.92□□□□□ -0.18
CBWD3-203ENST00000377344 PODXLO00592 558 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 INPPL1O15357 1258 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 TBX2Q13207 712 aaPredicted RBP13.92□□□□□ -0.18
CBWD3-203ENST00000377344 ZNF667Q5HYK9 610 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 IQCEQ6IPM2 695 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 DPY19L2P1Q6NXN4 242 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 CCDC186Q7Z3E2 898 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 ZNF280BQ86YH2 543 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 ZNF560Q96MR9 790 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 MRPL9Q9BYD2 267 aaKnown RBP13.92□□□□□ -0.18
CBWD3-203ENST00000377344 TTYH3Q9C0H2 523 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 XYLT2Q9H1B5 865 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 APOBEC3GQ9HC16 384 aaKnown RBP13.92□□□□□ -0.18
CBWD3-203ENST00000377344 CAPN11Q9UMQ6 739 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 NUB1Q9Y5A7 615 aa13.92□□□□□ -0.18
CBWD3-203ENST00000377344 ANO9A1A5B4 782 aa13.91□□□□□ -0.18
CBWD3-203ENST00000377344 RNF225M0QZC1 329 aaPredicted RBP13.91□□□□□ -0.18
CBWD3-203ENST00000377344 PIRO00625 290 aa13.91□□□□□ -0.18
CBWD3-203ENST00000377344 DGKIO75912 1065 aa13.91□□□□□ -0.18
CBWD3-203ENST00000377344 DDHD2O94830 711 aa13.91□□□□□ -0.18
CBWD3-203ENST00000377344 LRPAP1P30533 357 aa13.91□□□□□ -0.18
CBWD3-203ENST00000377344 KRT9P35527 623 aa13.91□□□□□ -0.18
CBWD3-203ENST00000377344 MFAP3P55082 362 aa13.91□□□□□ -0.18
CBWD3-203ENST00000377344 SCARA5Q6ZMJ2 495 aa13.91□□□□□ -0.18
CBWD3-203ENST00000377344 LRRC52Q8N7C0 313 aa13.91□□□□□ -0.18
CBWD3-203ENST00000377344 TAF4BQ92750 862 aa13.91□□□□□ -0.18
CBWD3-203ENST00000377344 PPP1R9BQ96SB3 815 aa13.91□□□□□ -0.18
CBWD3-203ENST00000377344 PAAF1Q9BRP4 392 aa13.91□□□□□ -0.18
CBWD3-203ENST00000377344 CXXC1Q9P0U4 656 aaPredicted RBP13.91□□□□□ -0.18
CBWD3-203ENST00000377344 AJAP1Q9UKB5 411 aaPredicted RBP13.91□□□□□ -0.18
CBWD3-203ENST00000377344 A0A1W2PQJ5 194 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 MFAP3LO75121 409 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 P4HA1P13674 534 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 RFX1P22670 979 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 RPL9P32969 192 aaKnown RBP13.9□□□□□ -0.18
CBWD3-203ENST00000377344 PNPLA4P41247 253 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 OR1G1P47890 313 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 TAF6P49848 677 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 TNNC1P63316 161 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 ZBED6P86452 979 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 GPIHBP1Q8IV16 184 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 CNGA4Q8IV77 575 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 LRRC43Q8N309 656 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 KAT5Q92993 513 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 DDX27Q96GQ7 796 aaKnown RBP13.9□□□□□ -0.18
CBWD3-203ENST00000377344 UROC1Q96N76 676 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 MMS19Q96T76 1030 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 ARID3AQ99856 593 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 ZBED2Q9BTP6 218 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 NIF3L1Q9GZT8 377 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 MTIF3Q9H2K0 278 aaKnown RBP13.9□□□□□ -0.18
CBWD3-203ENST00000377344 DNAJB4Q9UDY4 337 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 FBXL5Q9UKA1 691 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 POLIQ9UNA4 740 aa13.9□□□□□ -0.18
CBWD3-203ENST00000377344 SNX9Q9Y5X1 595 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms