RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 ARHGAP1Q07960 439 aa23.15■■□□□ 1.3
RNF39-202ENST00000376751 TTLL4Q14679 1199 aa23.15■■□□□ 1.3
RNF39-202ENST00000376751 TMC3Q7Z5M5 1100 aa23.15■■□□□ 1.3
RNF39-202ENST00000376751 CDR2LQ86X02 465 aaPredicted RBP23.15■■□□□ 1.3
RNF39-202ENST00000376751 MAGOHBQ96A72 148 aaKnown RBP23.15■■□□□ 1.3
RNF39-202ENST00000376751 TRIM11Q96F44 468 aa23.15■■□□□ 1.3
RNF39-202ENST00000376751 RNPEPQ9H4A4 650 aa23.15■■□□□ 1.3
RNF39-202ENST00000376751 PTPRHQ9HD43 1115 aa23.15■■□□□ 1.3
RNF39-202ENST00000376751 NFS1Q9Y697 457 aa23.15■■□□□ 1.3
RNF39-202ENST00000376751 ZSWIM8A7E2V4 1837 aa23.15■■□□□ 1.3
RNF39-202ENST00000376751 THAP12O43422 761 aa23.14■■□□□ 1.3
RNF39-202ENST00000376751 HOXC6P09630 235 aa23.14■■□□□ 1.3
RNF39-202ENST00000376751 RARAP10276 462 aa23.14■■□□□ 1.3
RNF39-202ENST00000376751 PTP4A2Q12974 167 aa23.14■■□□□ 1.3
RNF39-202ENST00000376751 KCTD16Q68DU8 428 aa23.14■■□□□ 1.3
RNF39-202ENST00000376751 EFCAB12Q6NXP0 572 aa23.14■■□□□ 1.3
RNF39-202ENST00000376751 TSHZ1Q6ZSZ6 1077 aa23.14■■□□□ 1.3
RNF39-202ENST00000376751 CEP120Q8N960 986 aa23.14■■□□□ 1.3
RNF39-202ENST00000376751 LRRC45Q96CN5 670 aa23.14■■□□□ 1.3
RNF39-202ENST00000376751 FZD8Q9H461 694 aa23.14■■□□□ 1.3
RNF39-202ENST00000376751 ZDHHC18Q9NUE0 388 aa23.14■■□□□ 1.3
RNF39-202ENST00000376751 PCYOX1Q9UHG3 505 aa23.14■■□□□ 1.3
RNF39-202ENST00000376751 HBP1O60381 514 aa23.14■■□□□ 1.29
RNF39-202ENST00000376751 SHOX2O60902 331 aaPredicted RBP23.14■■□□□ 1.29
RNF39-202ENST00000376751 C22orf31O95567 290 aa23.14■■□□□ 1.29
RNF39-202ENST00000376751 SLC26A2P50443 739 aa23.14■■□□□ 1.29
RNF39-202ENST00000376751 AP3M2P53677 418 aa23.14■■□□□ 1.29
RNF39-202ENST00000376751 LLGL1Q15334 1064 aa23.14■■□□□ 1.29
RNF39-202ENST00000376751 ZSCAN26Q16670 478 aa23.14■■□□□ 1.29
RNF39-202ENST00000376751 CYP1B1Q16678 543 aa23.14■■□□□ 1.29
RNF39-202ENST00000376751 DAB2IPQ5VWQ8 1189 aa23.14■■□□□ 1.29
RNF39-202ENST00000376751 MPZL3Q6UWV2 235 aa23.14■■□□□ 1.29
RNF39-202ENST00000376751 TRIM72Q6ZMU5 477 aa23.14■■□□□ 1.29
RNF39-202ENST00000376751 MMS22LQ6ZRQ5 1243 aa23.14■■□□□ 1.29
RNF39-202ENST00000376751 EFCAB13Q8IY85 973 aa23.14■■□□□ 1.29
RNF39-202ENST00000376751 EXOC8Q8IYI6 725 aa23.14■■□□□ 1.29
RNF39-202ENST00000376751 OR2W6PQ8NHA6 318 aa23.14■■□□□ 1.29
RNF39-202ENST00000376751 ASB14A6NK59 587 aa23.13■■□□□ 1.29
RNF39-202ENST00000376751 INO80B-WBP1J3KQ70 363 aa23.13■■□□□ 1.29
RNF39-202ENST00000376751 ACKR2O00590 384 aa23.13■■□□□ 1.29
RNF39-202ENST00000376751 MBTD1Q05BQ5 628 aa23.13■■□□□ 1.29
RNF39-202ENST00000376751 ATF7IP2Q5U623 682 aa23.13■■□□□ 1.29
RNF39-202ENST00000376751 ZDHHC24Q6UX98 284 aa23.13■■□□□ 1.29
RNF39-202ENST00000376751 THNSL1Q8IYQ7 743 aa23.13■■□□□ 1.29
RNF39-202ENST00000376751 INO80BQ9C086 356 aaPredicted RBP23.13■■□□□ 1.29
RNF39-202ENST00000376751 SNX24Q9Y343 169 aa23.13■■□□□ 1.29
RNF39-202ENST00000376751 IQCF3P0C7M6 154 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 ZNF568Q3ZCX4 644 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 DNAJC21Q5F1R6 531 aaKnown RBP23.12■■□□□ 1.29
RNF39-202ENST00000376751 CEP85LQ5SZL2 805 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 TAPT1Q6NXT6 567 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 MAMDC4Q6UXC1 1216 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 LRIG3Q6UXM1 1119 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 LRRC31Q6UY01 552 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 PHF13Q86YI8 300 aaPredicted RBP23.12■■□□□ 1.29
RNF39-202ENST00000376751 JPH2Q9BR39 696 aaPredicted RBP23.12■■□□□ 1.29
RNF39-202ENST00000376751 HERPUD2Q9BSE4 406 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 TXLNGYQ9BZA5 131 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 IMPG2Q9BZV3 1241 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 GRHL1Q9NZI5 618 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 ADAM22Q9P0K1 906 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 LOC102724159A0A0B4J2E5 919 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 GJB6O95452 261 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 OSTNP61366 133 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 IGBP1P78318 339 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 TFDP1Q14186 410 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 PWP2Q15269 919 aaKnown RBP23.12■■□□□ 1.29
RNF39-202ENST00000376751 ZNF792Q3KQV3 632 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 CCDC137Q6PK04 289 aaKnown RBP23.12■■□□□ 1.29
RNF39-202ENST00000376751 TMEM192Q8IY95 271 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 TMEM130Q8N3G9 435 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 SLC10A4Q96EP9 437 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 NIF3L1Q9GZT8 377 aa23.12■■□□□ 1.29
RNF39-202ENST00000376751 O00370 1275 aa23.11■■□□□ 1.29
RNF39-202ENST00000376751 RPS6KA5O75582 802 aa23.11■■□□□ 1.29
RNF39-202ENST00000376751 PROSCO94903 275 aa23.11■■□□□ 1.29
RNF39-202ENST00000376751 CD58P19256 250 aa23.11■■□□□ 1.29
RNF39-202ENST00000376751 COILP38432 576 aaPredicted RBP23.11■■□□□ 1.29
RNF39-202ENST00000376751 TFAMQ00059 246 aaKnown RBP23.11■■□□□ 1.29
RNF39-202ENST00000376751 DHX9Q08211 1270 aaKnown RBP23.11■■□□□ 1.29
RNF39-202ENST00000376751 MAMLD1Q13495 774 aa23.11■■□□□ 1.29
RNF39-202ENST00000376751 DUOXA2Q1HG44 320 aa23.11■■□□□ 1.29
RNF39-202ENST00000376751 LIN9Q5TKA1 542 aa23.11■■□□□ 1.29
RNF39-202ENST00000376751 DDX27Q96GQ7 796 aaKnown RBP23.11■■□□□ 1.29
RNF39-202ENST00000376751 FMO2Q99518 471 aa23.11■■□□□ 1.29
RNF39-202ENST00000376751 CDT1Q9H211 546 aa23.11■■□□□ 1.29
RNF39-202ENST00000376751 LGALS2P05162 132 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 ADORA2AP29274 412 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 RPL21P46778 160 aaKnown RBP23.1■■□□□ 1.29
RNF39-202ENST00000376751 ZNF844Q08AG5 666 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 PLEKHA7Q6IQ23 1121 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 LEKR1Q6ZMV7 388 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 C12orf50Q8NA57 414 aaPredicted RBP23.1■■□□□ 1.29
RNF39-202ENST00000376751 GPRC5AQ8NFJ5 357 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 UBLCP1Q8WVY7 318 aaPredicted RBP23.1■■□□□ 1.29
RNF39-202ENST00000376751 ZNF606Q8WXB4 792 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 ERAP1Q9NZ08 941 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 RASAL2Q9UJF2 1139 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 SCN4AP35499 1836 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 MYO1FO00160 1098 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms