RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 SLC26A2P50443 739 aa21.57■■□□□ 1.04
VSX1-202ENST00000376709 DHX9Q08211 1270 aaKnown RBP21.57■■□□□ 1.04
VSX1-202ENST00000376709 TTLL4Q14679 1199 aa21.57■■□□□ 1.04
VSX1-202ENST00000376709 UAP1Q16222 522 aaPredicted RBP21.57■■□□□ 1.04
VSX1-202ENST00000376709 TMEM132AQ24JP5 1023 aa21.57■■□□□ 1.04
VSX1-202ENST00000376709 LIN9Q5TKA1 542 aa21.57■■□□□ 1.04
VSX1-202ENST00000376709 LRIG3Q6UXM1 1119 aa21.57■■□□□ 1.04
VSX1-202ENST00000376709 LRRC31Q6UY01 552 aa21.57■■□□□ 1.04
VSX1-202ENST00000376709 C11orf70Q9BRQ4 267 aa21.57■■□□□ 1.04
VSX1-202ENST00000376709 PCYOX1Q9UHG3 505 aa21.57■■□□□ 1.04
VSX1-202ENST00000376709 TCRBV7S2A1N4TA0A589 114 aa21.57■■□□□ 1.04
VSX1-202ENST00000376709 RPS6KA5O75582 802 aa21.57■■□□□ 1.04
VSX1-202ENST00000376709 CFHP08603 1231 aa21.57■■□□□ 1.04
VSX1-202ENST00000376709 GRM1Q13255 1194 aa21.57■■□□□ 1.04
VSX1-202ENST00000376709 TFDP1Q14186 410 aa21.57■■□□□ 1.04
VSX1-202ENST00000376709 ZDHHC14Q8IZN3 488 aa21.57■■□□□ 1.04
VSX1-202ENST00000376709 ZNF668Q96K58 619 aaPredicted RBP21.57■■□□□ 1.04
VSX1-202ENST00000376709 CAPS2Q9BXY5 557 aa21.57■■□□□ 1.04
VSX1-202ENST00000376709 PDGFCQ9NRA1 345 aa21.57■■□□□ 1.04
VSX1-202ENST00000376709 CWC15Q9P013 229 aaKnown RBP21.57■■□□□ 1.04
VSX1-202ENST00000376709 ADAM22Q9P0K1 906 aa21.57■■□□□ 1.04
VSX1-202ENST00000376709 INO80B-WBP1J3KQ70 363 aa21.56■■□□□ 1.04
VSX1-202ENST00000376709 PDHXO00330 501 aa21.56■■□□□ 1.04
VSX1-202ENST00000376709 SHOX2O60902 331 aaPredicted RBP21.56■■□□□ 1.04
VSX1-202ENST00000376709 ASS1P00966 412 aaKnown RBP21.56■■□□□ 1.04
VSX1-202ENST00000376709 CST3P01034 146 aaPredicted RBP21.56■■□□□ 1.04
VSX1-202ENST00000376709 NOMO3P69849 1222 aa21.56■■□□□ 1.04
VSX1-202ENST00000376709 MCL1Q07820 350 aa21.56■■□□□ 1.04
VSX1-202ENST00000376709 LLGL2Q6P1M3 1020 aa21.56■■□□□ 1.04
VSX1-202ENST00000376709 FOXR1Q6PIV2 292 aa21.56■■□□□ 1.04
VSX1-202ENST00000376709 CCDC105Q8IYK2 499 aa21.56■■□□□ 1.04
VSX1-202ENST00000376709 INO80BQ9C086 356 aaPredicted RBP21.56■■□□□ 1.04
VSX1-202ENST00000376709 CNTN6Q9UQ52 1028 aa21.56■■□□□ 1.04
VSX1-202ENST00000376709 PODXLO00592 558 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 IVLP07476 585 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 GJB1P08034 283 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 MYZAPP0CAP1 466 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 SLC1A1P43005 524 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 DUOXA2Q1HG44 320 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 SCARA3Q6AZY7 606 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 TTC27Q6P3X3 843 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 SHCBP1Q8NEM2 672 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 ATP6V1G3Q96LB4 118 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 CENPHQ9H3R5 247 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 SNX24Q9Y343 169 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.55■■□□□ 1.04
VSX1-202ENST00000376709 ASB14A6NK59 587 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 HBP1O60381 514 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 PTGIRP43119 386 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 LLGL1Q15334 1064 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 SURF1Q15526 300 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 ZNF568Q3ZCX4 644 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 EFCAB12Q6NXP0 572 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 GPRC5AQ8NFJ5 357 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 OR2W6PQ8NHA6 318 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 MS4A4AQ96JQ5 239 aa21.55■■□□□ 1.04
VSX1-202ENST00000376709 MRPL47Q9HD33 250 aaKnown RBP21.55■■□□□ 1.04
VSX1-202ENST00000376709 CPSF3Q9UKF6 684 aaKnown RBP21.55■■□□□ 1.04
VSX1-202ENST00000376709 BTBD19C9JJ37 291 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 RARAP10276 462 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 CLCN3P51790 818 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 PLTPP55058 493 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 MYL6P60660 151 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 TFAMQ00059 246 aaKnown RBP21.54■■□□□ 1.04
VSX1-202ENST00000376709 TRPC3Q13507 836 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 CYP1B1Q16678 543 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 ATF7IP2Q5U623 682 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 MPZL3Q6UWV2 235 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 EFCAB13Q8IY85 973 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 THNSL1Q8IYQ7 743 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 RUNDC3BQ96NL0 473 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 ATP8A1Q9Y2Q0 1164 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 PTPN22Q9Y2R2 807 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 CCL15-CCL14A0A0B4J2E2 113 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 HMGB1P1B2RPK0 211 aaPredicted RBP21.54■■□□□ 1.04
VSX1-202ENST00000376709 ACKR2O00590 384 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 CD58P19256 250 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 COILP38432 576 aaPredicted RBP21.54■■□□□ 1.04
VSX1-202ENST00000376709 DRG2P55039 364 aaKnown RBP21.54■■□□□ 1.04
VSX1-202ENST00000376709 OSTNP61366 133 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 CCL15Q16663 113 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 PPP1R2P3Q6NXS1 205 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 MMS22LQ6ZRQ5 1243 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 TSHZ1Q6ZSZ6 1077 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 C1orf131Q8NDD1 294 aaKnown RBP21.54■■□□□ 1.04
VSX1-202ENST00000376709 ZBTB10Q96DT7 871 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 VCPIP1Q96JH7 1222 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 ZDHHC18Q9NUE0 388 aa21.54■■□□□ 1.04
VSX1-202ENST00000376709 EVPLQ92817 2033 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 H0YGN5 161 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 ABLIM1O14639 778 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 TMEM191BP0C7N4 346 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 CETPP11597 493 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 SGSM1Q2NKQ1 1148 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 ARMCX2Q7L311 632 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 PHF13Q86YI8 300 aaPredicted RBP21.53■■□□□ 1.04
VSX1-202ENST00000376709 ZNF606Q8WXB4 792 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 ERAP1Q9NZ08 941 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 NFS1Q9Y697 457 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 SCINQ9Y6U3 715 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms