RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 OTUD6AQ7L8S5 288 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 PIGWQ7Z7B1 504 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 LINC01465Q8N7H1 131 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 CCDC127Q96BQ5 260 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 OSBPL7Q9BZF2 842 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 XYLT2Q9H1B5 865 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 ATP8A1Q9Y2Q0 1164 aa10.25□□□□□ -0.77
TRIM39-202ENST00000376659 PSTPIP1O43586 416 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 SORBS3O60504 671 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 SMTNP53814 917 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 MAGOHP61326 146 aaKnown RBP10.24□□□□□ -0.77
TRIM39-202ENST00000376659 SLC29A2Q14542 456 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 LACTB2Q53H82 288 aaPredicted RBP10.24□□□□□ -0.77
TRIM39-202ENST00000376659 VSTM1Q6UX27 236 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 NSMFQ6X4W1 530 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 ABRAQ8N0Z2 381 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 MAGOHBQ96A72 148 aaKnown RBP10.24□□□□□ -0.77
TRIM39-202ENST00000376659 VCPIP1Q96JH7 1222 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 RUNDC3BQ96NL0 473 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 SEPT9Q9UHD8 586 aaPredicted RBP10.24□□□□□ -0.77
TRIM39-202ENST00000376659 DNAJC25-GNG10A0A024R161 153 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 MAFO75444 373 aaPredicted RBP10.24□□□□□ -0.77
TRIM39-202ENST00000376659 ARIH2O95376 493 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 GBP1P32455 592 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 ASPAP45381 313 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 RWDD2BP57060 319 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 IFI35P80217 286 aaPredicted RBP10.24□□□□□ -0.77
TRIM39-202ENST00000376659 CETN1Q12798 172 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 LMBRD2Q68DH5 695 aaPredicted RBP10.24□□□□□ -0.77
TRIM39-202ENST00000376659 NIPA2Q8N8Q9 360 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 EPS8L3Q8TE67 593 aaKnown RBP10.24□□□□□ -0.77
TRIM39-202ENST00000376659 DDX23Q9BUQ8 820 aaKnown RBP10.24□□□□□ -0.77
TRIM39-202ENST00000376659 KIAA1586Q9HCI6 787 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 CCDC169A6NNP5 214 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 SLC1A1P43005 524 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 HLTFQ14527 1009 aaKnown RBP eCLIP10.24□□□□□ -0.77
TRIM39-202ENST00000376659 ANGEL2Q5VTE6 544 aaKnown RBP10.24□□□□□ -0.77
TRIM39-202ENST00000376659 APOBEC3FQ8IUX4 373 aaKnown RBP10.24□□□□□ -0.77
TRIM39-202ENST00000376659 C10orf67Q8IYJ2 551 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 ARFGAP1Q8N6T3 406 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 UBLCP1Q8WVY7 318 aaPredicted RBP10.24□□□□□ -0.77
TRIM39-202ENST00000376659 CPA5Q8WXQ8 436 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 FAM81BQ96LP2 452 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 AS3MTQ9HBK9 375 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 LGALS13Q9UHV8 139 aa10.24□□□□□ -0.77
TRIM39-202ENST00000376659 NOVA2Q9UNW9 492 aaKnown RBP10.24□□□□□ -0.77
TRIM39-202ENST00000376659 A0A087WUV0 522 aaPredicted RBP10.23□□□□□ -0.77
TRIM39-202ENST00000376659 HNRNPDLO14979 420 aaKnown RBP10.23□□□□□ -0.77
TRIM39-202ENST00000376659 ASS1P00966 412 aaKnown RBP10.23□□□□□ -0.77
TRIM39-202ENST00000376659 HOXC6P09630 235 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 MMP8P22894 467 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 TNFSF9P41273 254 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 MCL1Q07820 350 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 PRAMEF18Q5VWM3 479 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 MIS18BP1Q6P0N0 1132 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 DRICH1Q6PGQ1 229 aaPredicted RBP10.23□□□□□ -0.77
TRIM39-202ENST00000376659 RIOX2Q8IUF8 465 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 GOLGA6L1Q8N7Z2 621 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 TMEM143Q96AN5 459 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 CDHR1Q96JP9 859 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 WDR83Q9BRX9 315 aaKnown RBP10.23□□□□□ -0.77
TRIM39-202ENST00000376659 RABEP2Q9H5N1 569 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 GPRC5DQ9NZD1 345 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 CYTH4Q9UIA0 394 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 FGFR4P22455 802 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 KCNJ1P48048 391 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 C1QBPQ07021 282 aaKnown RBP10.23□□□□□ -0.77
TRIM39-202ENST00000376659 CGB2Q6NT52 195 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 HIBCHQ6NVY1 386 aaPredicted RBP10.23□□□□□ -0.77
TRIM39-202ENST00000376659 MAMDC4Q6UXC1 1216 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 RUFY4Q6ZNE9 571 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 SPATS2Q86XZ4 545 aaKnown RBP10.23□□□□□ -0.77
TRIM39-202ENST00000376659 BRSK2Q8IWQ3 736 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 CHST13Q8NET6 341 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 CCT6BQ92526 530 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 RUFY1Q96T51 708 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 CDC42EP4Q9H3Q1 356 aaKnown RBP10.23□□□□□ -0.77
TRIM39-202ENST00000376659 CPSF3Q9UKF6 684 aaKnown RBP10.23□□□□□ -0.77
TRIM39-202ENST00000376659 AGO2Q9UKV8 859 aaKnown RBP10.23□□□□□ -0.77
TRIM39-202ENST00000376659 SCN4AP35499 1836 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 GOLGA6L10A0A0M3HER8 536 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 GMNCA6NCL1 334 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 ADCY3O60266 1144 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 CST3P01034 146 aaPredicted RBP10.23□□□□□ -0.77
TRIM39-202ENST00000376659 DCAF15Q66K64 600 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 SYDE1Q6ZW31 735 aaPredicted RBP10.23□□□□□ -0.77
TRIM39-202ENST00000376659 CYP4V2Q6ZWL3 525 aaPredicted RBP10.23□□□□□ -0.77
TRIM39-202ENST00000376659 ATG4AQ8WYN0 398 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 ZNF302Q9NR11 478 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 ANAPC7Q9UJX3 599 aa10.23□□□□□ -0.77
TRIM39-202ENST00000376659 A0A0G2JLL6 359 aaPredicted RBP10.22□□□□□ -0.77
TRIM39-202ENST00000376659 TMEM191CA6NGB0 347 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 RASSF9O75901 435 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 TMEM191BP0C7N4 346 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 RFC5P40937 340 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 ACOT2P49753 483 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 PLTPP55058 493 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 KRT17Q04695 432 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 VGLL4Q14135 290 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 C2CD6Q53TS8 623 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms