RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 DAAM2Q86T65 1068 aa18.93■□□□□ 0.62
CTTN-203ENST00000376561 TMEM40Q8WWA1 233 aa18.93■□□□□ 0.62
CTTN-203ENST00000376561 SPC25Q9HBM1 224 aa18.93■□□□□ 0.62
CTTN-203ENST00000376561 SCN10AQ9Y5Y9 1956 aa18.93■□□□□ 0.62
CTTN-203ENST00000376561 BUB1BO60566 1050 aaPredicted RBP18.93■□□□□ 0.62
CTTN-203ENST00000376561 NPTXRO95502 500 aa18.93■□□□□ 0.62
CTTN-203ENST00000376561 KRT19P08727 400 aa18.93■□□□□ 0.62
CTTN-203ENST00000376561 RARBP10826 455 aa18.93■□□□□ 0.62
CTTN-203ENST00000376561 HADHBP55084 474 aaKnown RBP18.93■□□□□ 0.62
CTTN-203ENST00000376561 SNX17Q15036 470 aa18.93■□□□□ 0.62
CTTN-203ENST00000376561 TCEAL1Q15170 157 aa18.93■□□□□ 0.62
CTTN-203ENST00000376561 CLEC16AQ2KHT3 1053 aa18.93■□□□□ 0.62
CTTN-203ENST00000376561 ACAD10Q6JQN1 1059 aa18.93■□□□□ 0.62
CTTN-203ENST00000376561 NOTUMQ6P988 496 aa18.93■□□□□ 0.62
CTTN-203ENST00000376561 SLC27A1Q6PCB7 646 aa18.93■□□□□ 0.62
CTTN-203ENST00000376561 FBXO38Q6PIJ6 1188 aa18.93■□□□□ 0.62
CTTN-203ENST00000376561 CXCL17Q6UXB2 119 aa18.93■□□□□ 0.62
CTTN-203ENST00000376561 PDCL2Q8N4E4 241 aa18.93■□□□□ 0.62
CTTN-203ENST00000376561 NOA1Q8NC60 698 aaKnown RBP18.93■□□□□ 0.62
CTTN-203ENST00000376561 RNF186Q9NXI6 227 aa18.93■□□□□ 0.62
CTTN-203ENST00000376561 COG5Q9UP83 839 aa18.93■□□□□ 0.62
CTTN-203ENST00000376561 UNGP13051 313 aaPredicted RBP18.92■□□□□ 0.62
CTTN-203ENST00000376561 GNA15P30679 374 aa18.92■□□□□ 0.62
CTTN-203ENST00000376561 DNA2P51530 1060 aa18.92■□□□□ 0.62
CTTN-203ENST00000376561 RPS6KA1Q15418 735 aa18.92■□□□□ 0.62
CTTN-203ENST00000376561 PEX26Q7Z412 305 aa18.92■□□□□ 0.62
CTTN-203ENST00000376561 APBB1IPQ7Z5R6 666 aaPredicted RBP18.92■□□□□ 0.62
CTTN-203ENST00000376561 NME8Q8N427 588 aa18.92■□□□□ 0.62
CTTN-203ENST00000376561 TAF4BQ92750 862 aa18.92■□□□□ 0.62
CTTN-203ENST00000376561 CREBZFQ9NS37 354 aa18.92■□□□□ 0.62
CTTN-203ENST00000376561 KIF4AO95239 1232 aa18.92■□□□□ 0.62
CTTN-203ENST00000376561 ITGB3P05106 788 aa18.92■□□□□ 0.62
CTTN-203ENST00000376561 H2AFXP16104 143 aaPredicted RBP18.92■□□□□ 0.62
CTTN-203ENST00000376561 ZNF132P52740 706 aa18.92■□□□□ 0.62
CTTN-203ENST00000376561 NKX3-2P78367 333 aa18.92■□□□□ 0.62
CTTN-203ENST00000376561 ZNF572Q7Z3I7 529 aaPredicted RBP18.92■□□□□ 0.62
CTTN-203ENST00000376561 CXorf38Q8TB03 319 aa18.92■□□□□ 0.62
CTTN-203ENST00000376561 CCDC94Q9BW85 323 aaPredicted RBP18.92■□□□□ 0.62
CTTN-203ENST00000376561 CISHQ9NSE2 258 aa18.92■□□□□ 0.62
CTTN-203ENST00000376561 CTTNBP2NLQ9P2B4 639 aa18.92■□□□□ 0.62
CTTN-203ENST00000376561 C2CD2Q9Y426 696 aa18.92■□□□□ 0.62
CTTN-203ENST00000376561 ASPAP45381 313 aa18.91■□□□□ 0.62
CTTN-203ENST00000376561 TMEM132DQ14C87 1099 aa18.91■□□□□ 0.62
CTTN-203ENST00000376561 NT5DC3Q86UY8 548 aa18.91■□□□□ 0.62
CTTN-203ENST00000376561 TMEM130Q8N3G9 435 aa18.91■□□□□ 0.62
CTTN-203ENST00000376561 EIF2AQ9BY44 585 aaKnown RBP18.91■□□□□ 0.62
CTTN-203ENST00000376561 ABCB6Q9NP58 842 aa18.91■□□□□ 0.62
CTTN-203ENST00000376561 STXBP5LQ9Y2K9 1186 aa18.91■□□□□ 0.62
CTTN-203ENST00000376561 ADAMTS4O75173 837 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 ELNP15502 786 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 CD58P19256 250 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 AXLP30530 894 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 CRYBB1P53674 252 aaPredicted RBP18.9■□□□□ 0.62
CTTN-203ENST00000376561 PTPROQ16827 1216 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 NBPF20Q3BBV1 942 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 CCDC181Q5TID7 509 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 TAF2Q6P1X5 1199 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 NT5DC4Q86YG4 428 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 CD302Q8IX05 232 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 CALR3Q96L12 384 aaKnown RBP18.9■□□□□ 0.62
CTTN-203ENST00000376561 RNF14Q9UBS8 474 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 NXF1Q9UBU9 619 aaKnown RBP18.9■□□□□ 0.62
CTTN-203ENST00000376561 GTF2IRD1Q9UHL9 959 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 GTF3C4Q9UKN8 822 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 TRIP11Q15643 1979 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 ATMINO43313 823 aaPredicted RBP18.9■□□□□ 0.62
CTTN-203ENST00000376561 CYP1A1P04798 512 aaPredicted RBP18.9■□□□□ 0.62
CTTN-203ENST00000376561 WEE2P0C1S8 567 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 CCND3P30281 292 aaPredicted RBP18.9■□□□□ 0.62
CTTN-203ENST00000376561 PAFAH1B1P43034 410 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 ZNF667Q5HYK9 610 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 SCARA5Q6ZMJ2 495 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 ZNF653Q96CK0 615 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 CFHR5Q9BXR6 569 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 PARD6BQ9BYG5 372 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 PDCL3Q9H2J4 239 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 ANKZF1Q9H8Y5 726 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 XPNPEP3Q9NQH7 507 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 SNTG2Q9NY99 539 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 EHD2Q9NZN4 543 aa18.9■□□□□ 0.62
CTTN-203ENST00000376561 THAP12O43422 761 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 MTA2O94776 668 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 CYP1A2P05177 515 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 PRKAR2AP13861 404 aaKnown RBP18.89■□□□□ 0.61
CTTN-203ENST00000376561 ITIH3Q06033 890 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 WDR72Q3MJ13 1102 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 SMYD5Q6GMV2 418 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 FAXDC2Q96IV6 333 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 MS4A14Q96JA4 679 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 PLEKHA5Q9HAU0 1116 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 SMARCAL1Q9NZC9 954 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 CHORDC1Q9UHD1 332 aaPredicted RBP18.89■□□□□ 0.61
CTTN-203ENST00000376561 AMFRQ9UKV5 643 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 POLIQ9UNA4 740 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 PIN4Q9Y237 131 aaKnown RBP18.89■□□□□ 0.61
CTTN-203ENST00000376561 RALGAPA2Q2PPJ7 1873 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 CES2O00748 559 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 KCNK3O14649 394 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 TRPA1O75762 1119 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 CFHP08603 1231 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms