RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 HP1BP3Q5SSJ5 553 aaPredicted RBP13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 ARHGEF16Q5VV41 709 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 SWSAP1Q6NVH7 229 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 SRRM1Q8IYB3 904 aaKnown RBP13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 SAMD3Q8N6K7 520 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 FITM2Q8N6M3 262 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 SLC17A8Q8NDX2 589 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 MAGEC3Q8TD91 643 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 TBC1D31Q96DN5 1066 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 FAM212AQ96EL1 285 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 RMDN2Q96LZ7 410 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 HAPLN2Q9GZV7 340 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 C1orf112Q9NSG2 853 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 SUFUQ9UMX1 484 aa13.19□□□□□ -0.3
TNFSF13B-201ENST00000375887 WNT10BO00744 389 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 WDR46O15213 610 aaKnown RBP13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 TCEA3O75764 348 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 EGFRP00533 1210 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 HLA-DRAP01903 254 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 FOXN2P32314 431 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 SLC1A1P43005 524 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 NLRP11P59045 1033 aaKnown RBP13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 MGAT5Q09328 741 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 BAATQ14032 418 aaPredicted RBP13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 ACCSLQ4AC99 568 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 SEZ6Q53EL9 994 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 BRDTQ58F21 947 aaPredicted RBP13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 ZBTB41Q5SVQ8 909 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 LARGE2Q8N3Y3 721 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 KIF2BQ8N4N8 673 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 ANKLE1Q8NAG6 615 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 OSBPL8Q9BZF1 889 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 NSRP1Q9H0G5 558 aaKnown RBP13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 USTQ9Y2C2 406 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 ZNF541Q9H0D2 1346 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 PI4K2BG5E9Z4 385 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 C4BPAP04003 597 aaKnown RBP13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 ZSCAN5DPP0CG00 497 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 KRT10P13645 584 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 CCNG2Q16589 344 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 ZACNQ401N2 412 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 FKBP1CQ5VVH2 108 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 CYP4F22Q6NT55 531 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 SYDE1Q6ZW31 735 aaPredicted RBP13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 FAM83AQ86UY5 434 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 SUPT20HQ8NEM7 779 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 BICD1Q96G01 975 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 ZBTB45Q96K62 511 aaPredicted RBP13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 FHDC1Q9C0D6 1143 aaPredicted RBP13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 EURLQ9NYK6 297 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 PRKAG3Q9UGI9 489 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 TRIM33Q9UPN9 1127 aa13.18□□□□□ -0.3
TNFSF13B-201ENST00000375887 TNNI1P19237 187 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 GARTP22102 1010 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 KLRC2P26717 231 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 CLDN10P78369 228 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 IZUMO3Q5VZ72 239 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 TMEM270Q6UE05 265 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 CRELD2Q6UXH1 353 aaPredicted RBP13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 ENOSF1Q7L5Y1 443 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 VSIG10LQ86VR7 867 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 CCDC60Q8IWA6 550 aaPredicted RBP13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 TACO1Q9BSH4 297 aaKnown RBP13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 ECT2Q9H8V3 914 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 ADAM22Q9P0K1 906 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 ARHGAP28Q9P2N2 729 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 L3MBTL1Q9Y468 752 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 MYCNP04198 464 aaPredicted RBP13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 NR3C2P08235 984 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 GCAP28676 217 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 SSR1P43307 286 aaKnown RBP13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 WDR4P57081 412 aaKnown RBP13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 RPL7AP62424 266 aaKnown RBP13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 NOMO3P69849 1222 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 PTP4A2Q12974 167 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 BNIP1Q12981 228 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 SPATA21Q7Z572 469 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 NLRX1Q86UT6 975 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 GRK7Q8WTQ7 553 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 THOC1Q96FV9 657 aaKnown RBP13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 FAM81BQ96LP2 452 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 TGS1Q96RS0 853 aaKnown RBP13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 LGALS13Q9UHV8 139 aa13.17□□□□□ -0.3
TNFSF13B-201ENST00000375887 A8MUI8 341 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 IGF2BP3O00425 579 aaKnown RBP eCLIP13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 ZC3H11AO75152 810 aaKnown RBP eCLIP13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 SUN1O94901 812 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 MYBL1P10243 752 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 ETS1P14921 441 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 KCNA2P16389 499 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 MAN1A1P33908 653 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 ALDH5A1P51649 535 aaPredicted RBP13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 MTMR2Q13614 643 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 NEDD9Q14511 834 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 ZNF268Q14587 947 aaPredicted RBP13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 FASTKD3Q14CZ7 662 aaKnown RBP13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 P3H1Q32P28 736 aa13.16□□□□□ -0.3
TNFSF13B-201ENST00000375887 PRAMEF18Q5VWM3 479 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms