RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 POLR2DO15514 142 aaKnown RBP9.61□□□□□ -0.87
UBR4-201ENST00000375218 FSBPO95073 299 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 RTN3O95197 1032 aaPredicted RBP9.61□□□□□ -0.87
UBR4-201ENST00000375218 GJB6O95452 261 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 POLR2MP0CAP2 368 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 POU2F1P14859 743 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 HPGDP15428 266 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 PAMP19021 973 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 RPIAP49247 311 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 SCAND1P57086 179 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 ATP8B2P98198 1209 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 RNF135Q8IUD6 432 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 DEPTORQ8TB45 409 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 SLC35B4Q969S0 331 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 VCPIP1Q96JH7 1222 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 CHAMP1Q96JM3 812 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 CABS1Q96KC9 395 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 VPS16Q9H269 839 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 HMG20BQ9P0W2 317 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 GRHPRQ9UBQ7 328 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 MED16Q9Y2X0 877 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 PCDH11XQ9BZA7 1347 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 PCDH11YQ9BZA8 1340 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 A0A1W2PPL8 197 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 GOLGA8AA7E2F4 631 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 KRIT1O00522 736 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 YKT6O15498 198 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 TTI1O43156 1089 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 MAFO75444 373 aaPredicted RBP9.61□□□□□ -0.87
UBR4-201ENST00000375218 SDSP20132 328 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 GUCY1A2P33402 732 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 RFC4P35249 363 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 PCP4P48539 62 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 C1orf185Q5T7R7 199 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 FYB2Q5VWT5 728 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 VGLL2Q8N8G2 317 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 FBXO15Q8NCQ5 510 aaPredicted RBP9.61□□□□□ -0.87
UBR4-201ENST00000375218 DENND1AQ8TEH3 1009 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 SGK3Q96BR1 496 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 LY9Q9HBG7 655 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 POLHQ9Y253 713 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 RSPH10B2B2RC85 870 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 ACTN4O43707 911 aaKnown RBP9.6□□□□□ -0.87
UBR4-201ENST00000375218 USP2O75604 605 aaPredicted RBP9.6□□□□□ -0.87
UBR4-201ENST00000375218 POP4O95707 220 aaKnown RBP9.6□□□□□ -0.87
UBR4-201ENST00000375218 OLFM2O95897 454 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 RSPH10BP0C881 870 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 RPP30P78346 268 aaKnown RBP9.6□□□□□ -0.87
UBR4-201ENST00000375218 GALNT1Q10472 559 aaPredicted RBP9.6□□□□□ -0.87
UBR4-201ENST00000375218 HABP2Q14520 560 aaPredicted RBP9.6□□□□□ -0.87
UBR4-201ENST00000375218 PCBP1Q15365 356 aaKnown RBP eCLIP9.6□□□□□ -0.87
UBR4-201ENST00000375218 KCTD21Q4G0X4 260 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 ARHGAP36Q6ZRI8 547 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 TMTC1Q8IUR5 882 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 HID1Q8IV36 788 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 EFHBQ8N7U6 833 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 CCDC150Q8NCX0 1101 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 TSEN34Q9BSV6 310 aaKnown RBP9.6□□□□□ -0.87
UBR4-201ENST00000375218 SORBS1Q9BX66 1292 aaKnown RBP9.6□□□□□ -0.87
UBR4-201ENST00000375218 CERS4Q9HA82 394 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 PCDHB12Q9Y5F1 795 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 PGPEP1LA6NFU8 196 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 MYL6BP14649 208 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 CDK17Q00537 523 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 AARDQ4LEZ3 155 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 BRICD5Q6PL45 260 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 PCYOX1LQ8NBM8 494 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 EDC3Q96F86 508 aaKnown RBP9.6□□□□□ -0.87
UBR4-201ENST00000375218 ORC3Q9UBD5 711 aaPredicted RBP9.6□□□□□ -0.87
UBR4-201ENST00000375218 SATB2Q9UPW6 733 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 APOBEC2Q9Y235 224 aaKnown RBP9.6□□□□□ -0.87
UBR4-201ENST00000375218 CAB39Q9Y376 341 aaPredicted RBP9.6□□□□□ -0.87
UBR4-201ENST00000375218 SCN9AQ15858 1988 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 AP3D1O14617 1153 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 ATP5HO75947 161 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 IRS1P35568 1242 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 PRIM2P49643 509 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 GCKRQ14397 625 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 GBX1Q14549 363 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 LINC00116Q8NCU8 138 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 ZC3H10Q96K80 434 aaKnown RBP9.6□□□□□ -0.87
UBR4-201ENST00000375218 RIPOR3Q96MK2 946 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 CLUHP3Q96NS8 147 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 TRIT1Q9H3H1 467 aaKnown RBP9.6□□□□□ -0.87
UBR4-201ENST00000375218 C8orf33Q9H7E9 229 aaPredicted RBP9.6□□□□□ -0.87
UBR4-201ENST00000375218 DPP7Q9UHL4 492 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 PCDHGB2Q9Y5G2 931 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 DLEC1Q9Y238 1755 aa9.6□□□□□ -0.87
UBR4-201ENST00000375218 MYL4P12829 197 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 HDCP19113 662 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 KRT2P35908 639 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 RABIFP47224 123 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 B2MP61769 119 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 COTL1Q14019 142 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 PLEKHO1Q53GL0 409 aaPredicted RBP9.59□□□□□ -0.87
UBR4-201ENST00000375218 CD302Q8IX05 232 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 DNAJC10Q8IXB1 793 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 HERVK_113Q902F9 699 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 SAMD11Q96NU1 681 aa9.59□□□□□ -0.87
UBR4-201ENST00000375218 KIAA1683Q9H0B3 1180 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms