RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 MGAT5Q09328 741 aa5.86□□□□□ -1.47
PMS1-202ENST00000374826 STRN3Q13033 797 aa5.86□□□□□ -1.47
PMS1-202ENST00000374826 LRCH2Q5VUJ6 765 aa5.86□□□□□ -1.47
PMS1-202ENST00000374826 CCDC62Q6P9F0 684 aa5.86□□□□□ -1.47
PMS1-202ENST00000374826 OLFML1Q6UWY5 402 aa5.86□□□□□ -1.47
PMS1-202ENST00000374826 UBR7Q8N806 425 aa5.86□□□□□ -1.47
PMS1-202ENST00000374826 PRDM11Q9NQV5 511 aa5.86□□□□□ -1.47
PMS1-202ENST00000374826 PRSS50Q9UI38 385 aa5.86□□□□□ -1.47
PMS1-202ENST00000374826 APOBEC2Q9Y235 224 aaKnown RBP5.86□□□□□ -1.47
PMS1-202ENST00000374826 RGPD1P0DJD0 1748 aa5.85□□□□□ -1.47
PMS1-202ENST00000374826 TNS1Q9HBL0 1735 aaKnown RBP5.85□□□□□ -1.47
PMS1-202ENST00000374826 ATRNO75882 1429 aa5.85□□□□□ -1.47
PMS1-202ENST00000374826 CPDO75976 1380 aa5.85□□□□□ -1.47
PMS1-202ENST00000374826 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.85□□□□□ -1.47
PMS1-202ENST00000374826 HOXA3O43365 443 aaPredicted RBP5.85□□□□□ -1.47
PMS1-202ENST00000374826 RECQL4O94761 1208 aa5.85□□□□□ -1.47
PMS1-202ENST00000374826 SCAF4O95104 1147 aaKnown RBP5.85□□□□□ -1.47
PMS1-202ENST00000374826 ZFP36P26651 326 aaKnown RBP5.85□□□□□ -1.47
PMS1-202ENST00000374826 SOX5P35711 763 aa5.85□□□□□ -1.47
PMS1-202ENST00000374826 ZEB1P37275 1124 aaPredicted RBP5.85□□□□□ -1.47
PMS1-202ENST00000374826 TAP1Q03518 808 aa5.85□□□□□ -1.47
PMS1-202ENST00000374826 TIGD2Q4W5G0 525 aa5.85□□□□□ -1.47
PMS1-202ENST00000374826 STRA8Q7Z7C7 330 aa5.85□□□□□ -1.47
PMS1-202ENST00000374826 SLC41A1Q8IVJ1 513 aa5.85□□□□□ -1.47
PMS1-202ENST00000374826 GLB1L2Q8IW92 636 aa5.85□□□□□ -1.47
PMS1-202ENST00000374826 RSAD2Q8WXG1 361 aa5.85□□□□□ -1.47
PMS1-202ENST00000374826 CAAP1Q9H8G2 361 aa5.85□□□□□ -1.47
PMS1-202ENST00000374826 SYNPO2LQ9H987 977 aa5.85□□□□□ -1.47
PMS1-202ENST00000374826 EVLQ9UI08 416 aaPredicted RBP5.85□□□□□ -1.47
PMS1-202ENST00000374826 PKD1L3Q7Z443 1732 aa5.85□□□□□ -1.47
PMS1-202ENST00000374826 DOT1LQ8TEK3 1739 aa5.85□□□□□ -1.47
PMS1-202ENST00000374826 RGS12O14924 1447 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 MASP2O00187 686 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 TRIM24O15164 1050 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 LPLP06858 475 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 PTTG1IPP53801 180 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 SESN3P58005 492 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 TRIM25Q14258 630 aaKnown RBP5.84□□□□□ -1.47
PMS1-202ENST00000374826 CSRP2Q16527 193 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 CT83Q5H943 113 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 PITRM1Q5JRX3 1037 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 HECTD2Q5U5R9 776 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 ZNF772Q68DY9 489 aaPredicted RBP5.84□□□□□ -1.47
PMS1-202ENST00000374826 TAS1R1Q7RTX1 841 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 LYSMD2Q8IV50 215 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 MSL3Q8N5Y2 521 aaKnown RBP5.84□□□□□ -1.47
PMS1-202ENST00000374826 CLRN3Q8NCR9 226 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 OR14C36Q8NHC7 312 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 CHAC2Q8WUX2 184 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 ENKD1Q9H0I2 346 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 PANK3Q9H999 370 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 CYP4F11Q9HBI6 524 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 EP400Q96L91 3159 aa5.84□□□□□ -1.47
PMS1-202ENST00000374826 CGNL1Q0VF96 1302 aa5.83□□□□□ -1.48
PMS1-202ENST00000374826 A0A1W2PR48 441 aa5.83□□□□□ -1.48
PMS1-202ENST00000374826 FYB1O15117 783 aa5.83□□□□□ -1.48
PMS1-202ENST00000374826 LAG3P18627 525 aa5.83□□□□□ -1.48
PMS1-202ENST00000374826 MASP1P48740 699 aa5.83□□□□□ -1.48
PMS1-202ENST00000374826 ATXN1P54253 815 aaKnown RBP5.83□□□□□ -1.48
PMS1-202ENST00000374826 C21orf58P58505 322 aa5.83□□□□□ -1.48
PMS1-202ENST00000374826 PDCD1Q15116 288 aa5.83□□□□□ -1.48
PMS1-202ENST00000374826 METTL24Q5JXM2 366 aa5.83□□□□□ -1.48
PMS1-202ENST00000374826 STRIP1Q5VSL9 837 aa5.83□□□□□ -1.48
PMS1-202ENST00000374826 ADGRG3Q86Y34 549 aa5.83□□□□□ -1.48
PMS1-202ENST00000374826 OR5M3Q8NGP4 307 aa5.83□□□□□ -1.48
PMS1-202ENST00000374826 COG3Q96JB2 828 aa5.83□□□□□ -1.48
PMS1-202ENST00000374826 BBC3Q96PG8 261 aaPredicted RBP5.83□□□□□ -1.48
PMS1-202ENST00000374826 FAM193BQ96PV7 902 aaPredicted RBP5.83□□□□□ -1.48
PMS1-202ENST00000374826 CPPED1Q9BRF8 314 aaPredicted RBP5.83□□□□□ -1.48
PMS1-202ENST00000374826 KCNH6Q9H252 994 aa5.83□□□□□ -1.48
PMS1-202ENST00000374826 KCTD10Q9H3F6 313 aa5.83□□□□□ -1.48
PMS1-202ENST00000374826 PRDM12Q9H4Q4 367 aa5.83□□□□□ -1.48
PMS1-202ENST00000374826 ZNF768Q9H5H4 540 aaKnown RBP5.83□□□□□ -1.48
PMS1-202ENST00000374826 TOPORSQ9NS56 1045 aaPredicted RBP5.83□□□□□ -1.48
PMS1-202ENST00000374826 CDY2AQ9Y6F7 541 aa5.83□□□□□ -1.48
PMS1-202ENST00000374826 BTAF1O14981 1849 aa5.83□□□□□ -1.48
PMS1-202ENST00000374826 CDK12Q9NYV4 1490 aaPredicted RBP5.83□□□□□ -1.48
PMS1-202ENST00000374826 AATKQ6ZMQ8 1374 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 CENPVL1A0A0U1RR11 272 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 AHRRA9YTQ3 701 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 KIAA0355O15063 1070 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 BRINP1O60477 761 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 CLSTN1O94985 981 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 CFBP00751 764 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 CASRP41180 1078 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 LGALS4P56470 323 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 WNT3AP56704 352 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 DUSP2Q05923 314 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 FAM214AQ32MH5 1076 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 CT47A1Q5JQC4 288 aaPredicted RBP5.82□□□□□ -1.48
PMS1-202ENST00000374826 SYCE2Q6PIF2 218 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 UNC5CLQ8IV45 518 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 KCNH5Q8NCM2 988 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 BEND2Q8NDZ0 799 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 MYEOVQ96EZ4 313 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 ACAP3Q96P50 834 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 PDCD2LQ9BRP1 358 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 EPC1Q9H2F5 836 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 TRPC5Q9UL62 973 aaPredicted RBP5.82□□□□□ -1.48
PMS1-202ENST00000374826 SCN11AQ9UI33 1791 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms