RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 ITGB3P05106 788 aa16.21■□□□□ 0.19
HSPG2-201ENST00000374673 PAX3P23760 479 aa16.21■□□□□ 0.19
HSPG2-201ENST00000374673 IGFBP6P24592 240 aaPredicted RBP16.21■□□□□ 0.19
HSPG2-201ENST00000374673 ELAVL2Q12926 359 aaKnown RBP16.21■□□□□ 0.19
HSPG2-201ENST00000374673 TPD52L1Q16890 204 aaPredicted RBP16.21■□□□□ 0.19
HSPG2-201ENST00000374673 ANO6Q4KMQ2 910 aa16.21■□□□□ 0.19
HSPG2-201ENST00000374673 Q7L0L9 218 aa16.21■□□□□ 0.19
HSPG2-201ENST00000374673 HASPINQ8TF76 798 aa16.21■□□□□ 0.19
HSPG2-201ENST00000374673 ZNF560Q96MR9 790 aa16.21■□□□□ 0.19
HSPG2-201ENST00000374673 FAM161BQ96MY7 647 aa16.21■□□□□ 0.19
HSPG2-201ENST00000374673 BPIFA3Q9BQP9 254 aa16.21■□□□□ 0.19
HSPG2-201ENST00000374673 HERC2P3Q9BVR0 1158 aa16.21■□□□□ 0.19
HSPG2-201ENST00000374673 VN1R3Q9BXE9 311 aa16.21■□□□□ 0.19
HSPG2-201ENST00000374673 THAP9Q9H5L6 903 aa16.21■□□□□ 0.19
HSPG2-201ENST00000374673 SIX4Q9UIU6 781 aa16.21■□□□□ 0.19
HSPG2-201ENST00000374673 TSC2P49815 1807 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 SOD2P04179 222 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 TRIM49P0CI25 452 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 TRIM49CP0CI26 452 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 DNAJB1P25685 340 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 POLR2BP30876 1174 aaKnown RBP16.2■□□□□ 0.18
HSPG2-201ENST00000374673 GTF2H1P32780 548 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 PNPLA4P41247 253 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 AARSP49588 968 aaKnown RBP eCLIP16.2■□□□□ 0.18
HSPG2-201ENST00000374673 TAF6P49848 677 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 RBP5P82980 135 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 CAMK1Q14012 370 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 ZACNQ401N2 412 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 C15orf39Q6ZRI6 1047 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 DEFB123Q8N688 67 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 LRRC52Q8N7C0 313 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 SLC35C1Q96A29 364 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 GPR62Q9BZJ7 368 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 NAT10Q9H0A0 1025 aaKnown RBP16.2■□□□□ 0.18
HSPG2-201ENST00000374673 ZBP1Q9H171 429 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 TLR9Q9NR96 1032 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 LMCD1Q9NZU5 365 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 AGAP1Q9UPQ3 857 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 NUB1Q9Y5A7 615 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 MYO9BQ13459 2157 aa16.2■□□□□ 0.18
HSPG2-201ENST00000374673 FSCN2O14926 492 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 TRAPPC3O43617 180 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 STX10O60499 249 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 KRT19P08727 400 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 CTSAP10619 480 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 POU3F3P20264 500 aaPredicted RBP16.19■□□□□ 0.18
HSPG2-201ENST00000374673 BRCC3P46736 316 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 LILRA4P59901 499 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 MYL5Q02045 173 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 PPP3CAQ08209 521 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 PTPROQ16827 1216 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 DCAF17Q5H9S7 520 aaPredicted RBP16.19■□□□□ 0.18
HSPG2-201ENST00000374673 TDRD10Q5VZ19 366 aaKnown RBP16.19■□□□□ 0.18
HSPG2-201ENST00000374673 PDE12Q6L8Q7 609 aaKnown RBP16.19■□□□□ 0.18
HSPG2-201ENST00000374673 SV2AQ7L0J3 742 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 IRF2BP1Q8IU81 584 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 FAM114A1Q8IWE2 563 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 TRIM59Q8IWR1 403 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 VPS52Q8N1B4 723 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 MRPL38Q96DV4 380 aaKnown RBP16.19■□□□□ 0.18
HSPG2-201ENST00000374673 SUSD3Q96L08 255 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 CNOT6LQ96LI5 555 aaKnown RBP16.19■□□□□ 0.18
HSPG2-201ENST00000374673 TMEM8AQ9HCN3 771 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 CHST7Q9NS84 486 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 MTMR10Q9NXD2 777 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 NFE2L3Q9Y4A8 694 aa16.19■□□□□ 0.18
HSPG2-201ENST00000374673 M0QZQ0 153 aa16.18■□□□□ 0.18
HSPG2-201ENST00000374673 CST3P01034 146 aaPredicted RBP16.18■□□□□ 0.18
HSPG2-201ENST00000374673 GCLMP48507 274 aa16.18■□□□□ 0.18
HSPG2-201ENST00000374673 ERVFC1P60507 584 aa16.18■□□□□ 0.18
HSPG2-201ENST00000374673 BIRC3Q13489 604 aa16.18■□□□□ 0.18
HSPG2-201ENST00000374673 ADGRE1Q14246 886 aa16.18■□□□□ 0.18
HSPG2-201ENST00000374673 USP41Q3LFD5 358 aa16.18■□□□□ 0.18
HSPG2-201ENST00000374673 SV2CQ496J9 727 aa16.18■□□□□ 0.18
HSPG2-201ENST00000374673 TIGD5Q53EQ6 642 aa16.18■□□□□ 0.18
HSPG2-201ENST00000374673 TCERG1LQ5VWI1 586 aa16.18■□□□□ 0.18
HSPG2-201ENST00000374673 KRT39Q6A163 491 aa16.18■□□□□ 0.18
HSPG2-201ENST00000374673 SCARA3Q6AZY7 606 aa16.18■□□□□ 0.18
HSPG2-201ENST00000374673 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.18■□□□□ 0.18
HSPG2-201ENST00000374673 GPR65Q8IYL9 337 aa16.18■□□□□ 0.18
HSPG2-201ENST00000374673 GUCD1Q96NT3 240 aa16.18■□□□□ 0.18
HSPG2-201ENST00000374673 GAS2L1Q99501 681 aaPredicted RBP16.18■□□□□ 0.18
HSPG2-201ENST00000374673 CDX2Q99626 313 aaPredicted RBP16.18■□□□□ 0.18
HSPG2-201ENST00000374673 NGRNQ9NPE2 291 aaKnown RBP16.18■□□□□ 0.18
HSPG2-201ENST00000374673 R3HCC1Q9Y3T6 440 aaKnown RBP16.18■□□□□ 0.18
HSPG2-201ENST00000374673 CHD9Q3L8U1 2897 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 KPNA7A9QM74 516 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 SYN3O14994 580 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 SPTLC1O15269 473 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 PHACTR2O75167 634 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 VNN1O95497 513 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 STAU1O95793 577 aaKnown RBP16.17■□□□□ 0.18
HSPG2-201ENST00000374673 CAVIN2O95810 425 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 FGFR3P22607 806 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 ATICP31939 592 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 IRS1P35568 1242 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 GLUD2P49448 558 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 ZNF165P49910 485 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 MXI1P50539 228 aa16.17■□□□□ 0.18
HSPG2-201ENST00000374673 DSG1Q02413 1049 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms