RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 SLITRK6Q9H5Y7 841 aa13.45□□□□□ -0.26
PRPF4-202ENST00000374199 ARF4P18085 180 aaPredicted RBP13.45□□□□□ -0.26
PRPF4-202ENST00000374199 HOXA11P31270 313 aaPredicted RBP13.45□□□□□ -0.26
PRPF4-202ENST00000374199 ZBTB6Q15916 424 aa13.45□□□□□ -0.26
PRPF4-202ENST00000374199 LIMS2Q7Z4I7 341 aa13.45□□□□□ -0.26
PRPF4-202ENST00000374199 DPP9Q86TI2 863 aa13.45□□□□□ -0.26
PRPF4-202ENST00000374199 ZNF518BQ9C0D4 1074 aa13.45□□□□□ -0.26
PRPF4-202ENST00000374199 UPF3AQ9H1J1 476 aaKnown RBP13.45□□□□□ -0.26
PRPF4-202ENST00000374199 KAT6AQ92794 2004 aa13.45□□□□□ -0.26
PRPF4-202ENST00000374199 KCNK3O14649 394 aa13.45□□□□□ -0.26
PRPF4-202ENST00000374199 GRM5P41594 1212 aa13.45□□□□□ -0.26
PRPF4-202ENST00000374199 TMEM192Q8IY95 271 aa13.45□□□□□ -0.26
PRPF4-202ENST00000374199 OR6J1Q8NGC5 347 aa13.45□□□□□ -0.26
PRPF4-202ENST00000374199 SOCS4Q8WXH5 440 aa13.45□□□□□ -0.26
PRPF4-202ENST00000374199 TSPAN18Q96SJ8 248 aa13.45□□□□□ -0.26
PRPF4-202ENST00000374199 SELENOOQ9BVL4 669 aa13.45□□□□□ -0.26
PRPF4-202ENST00000374199 A0A087WZ62 844 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 ZEB2O60315 1214 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 GLI1P08151 1106 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 INCA1Q0VD86 236 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 ZNF568Q3ZCX4 644 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 CD302Q8IX05 232 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 C1orf127Q8N9H9 656 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 RBBP8NLQ8NC74 664 aaPredicted RBP13.44□□□□□ -0.26
PRPF4-202ENST00000374199 CAGE1Q8TC20 777 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 SLCO2A1Q92959 643 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 APBA2Q99767 749 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 FDXACB1Q9BRP7 624 aaPredicted RBP13.44□□□□□ -0.26
PRPF4-202ENST00000374199 LHX5Q9H2C1 402 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 LCMT1Q9UIC8 334 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 CFHP08603 1231 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 MMP8P22894 467 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 CTGFP29279 349 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 NOP2P46087 812 aaKnown RBP13.44□□□□□ -0.26
PRPF4-202ENST00000374199 MYL6P60660 151 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 PPFIA1Q13136 1202 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 CASP8Q14790 479 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 SLC10A6Q3KNW5 377 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 RGMBQ6NW40 437 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 ZNF564Q8TBZ8 553 aaPredicted RBP13.44□□□□□ -0.26
PRPF4-202ENST00000374199 WHAMMQ8TF30 809 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 PLEKHA5Q9HAU0 1116 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 NMRK2Q9NPI5 230 aa13.44□□□□□ -0.26
PRPF4-202ENST00000374199 MAP9Q49MG5 647 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 SEZ6Q53EL9 994 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 EMBQ6PCB8 327 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 NUP85Q9BW27 656 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 TRIP11Q15643 1979 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 CAPN15O75808 1086 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 PAEPP09466 180 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 STAG3L1P0CL83 205 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 ABCB4P21439 1286 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 TMOD1P28289 359 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 SLC1A1P43005 524 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 NAP1L1P55209 391 aaKnown RBP13.43□□□□□ -0.26
PRPF4-202ENST00000374199 HUNKP57058 714 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 PPP2R5EQ16537 467 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 DCAF4L1Q3SXM0 396 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 ZDHHC14Q8IZN3 488 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 WDTC1Q8N5D0 677 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 CEP120Q8N960 986 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 NLRP4Q96MN2 994 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 HPCAL4Q9UM19 191 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 TSC2P49815 1807 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 CCDC66A2RUB6 948 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 TMCO5BA8MYB1 307 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 SMIM10L2AP0DMW4 78 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 SMIM10L2BP0DMW5 78 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 CCDC181Q5TID7 509 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 WDR78Q5VTH9 848 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 ZBTB33Q86T24 672 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 NIPA2Q8N8Q9 360 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 ELMO3Q96BJ8 720 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 PSMB7Q99436 277 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 SH3GL2Q99962 352 aa13.43□□□□□ -0.26
PRPF4-202ENST00000374199 LACTBL1A8MY62 500 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 HSPA6P17066 643 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 COMTP21964 271 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 EIF4BP23588 611 aaKnown RBP13.42□□□□□ -0.26
PRPF4-202ENST00000374199 MKRN3Q13064 507 aaKnown RBP13.42□□□□□ -0.26
PRPF4-202ENST00000374199 TAF3Q5VWG9 929 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 CISHQ9NSE2 258 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 PCYOX1Q9UHG3 505 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 CPA4Q9UI42 421 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 ITGA11Q9UKX5 1188 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 RAD51CO43502 376 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 NFICP08651 508 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 CXCL8P10145 99 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 GNA15P30679 374 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 EPHB4P54760 987 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 TNNC1P63316 161 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 GABPB1Q06547 395 aaPredicted RBP13.42□□□□□ -0.26
PRPF4-202ENST00000374199 MAMLD1Q13495 774 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 C8orf74Q6P047 294 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 ZNF606Q8WXB4 792 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 KRT35Q92764 455 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 RNPC3Q96LT9 517 aaKnown RBP13.42□□□□□ -0.26
PRPF4-202ENST00000374199 CYP3A43Q9HB55 503 aa13.42□□□□□ -0.26
PRPF4-202ENST00000374199 AXLP30530 894 aa13.41□□□□□ -0.26
PRPF4-202ENST00000374199 GABRB2P47870 512 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms