RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 RRP15Q9Y3B9 282 aaKnown RBP11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 LRRIQ3A6PVS8 624 aaPredicted RBP11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 PDAP1Q13442 181 aaKnown RBP11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 MOXD1Q6UVY6 613 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 ADSSL1Q8N142 457 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 RNPC3Q96LT9 517 aaKnown RBP11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 GOLPH3LQ9H4A5 285 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 PAK5Q9P286 719 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 HDAC6Q9UBN7 1215 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 CDV3Q9UKY7 258 aaKnown RBP11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 ITIH6Q6UXX5 1313 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 SYCE1LA8MT33 242 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 LRG1P02750 347 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 GUCY2CP25092 1073 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 KRT72Q14CN4 511 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 SHC4Q6S5L8 630 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 SEPT5Q99719 369 aaPredicted RBP11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 REEP2Q9BRK0 252 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 KIAA1257Q9ULG3 409 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 ARHGAP26Q9UNA1 814 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 PRR29P0C7W0 189 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 OCM2P0CE71 109 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 OCMP0CE72 109 aaPredicted RBP11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 SLC26A2P50443 739 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 MARCH10Q8NA82 808 aaPredicted RBP11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 LINC00116Q8NCU8 138 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 MUC3BQ9H195 1237 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 NKRFO15226 690 aaKnown RBP eCLIP11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 DPEP1P16444 411 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 FXR2P51116 673 aaKnown RBP eCLIP11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 TGFB2P61812 414 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 EFCAB12Q6NXP0 572 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 ATP6V0D2Q8N8Y2 350 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 ADARB2Q9NS39 739 aaKnown RBP11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 SETBP1Q9Y6X0 1596 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 TLR2O60603 784 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 DIAPH2O60879 1101 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 GARTP22102 1010 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 ZNF211Q13398 564 aaPredicted RBP11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 MGAT5BQ3V5L5 792 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 IL31Q6EBC2 164 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 DDIASQ8IXT1 998 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 TTC30BQ8N4P2 665 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 DDX47Q9H0S4 455 aaKnown RBP11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 ARHGEF38Q9NXL2 777 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 ATP9BO43861 1147 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 CDH2P19022 906 aaPredicted RBP11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 ITIH2P19823 946 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 CASP1P29466 404 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 TDRD10Q5VZ19 366 aaKnown RBP11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 PLEKHH3Q7Z736 793 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 NOP53Q9NZM5 478 aaKnown RBP11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 DLC1Q96QB1 1528 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 RNF103-CHMP3A0A140T963 221 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 CARNS1A5YM72 827 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 ICAM1P05362 532 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 ALDH7A1P49419 539 aaKnown RBP11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 OCA2Q04671 838 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 ARMC6Q6NXE6 501 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 OOSP2Q86WS3 158 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 MAD2L2Q9UI95 211 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 CLTCL1P53675 1640 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 KCNN4O15554 427 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 FAM200BP0CF97 657 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 OR1G1P47890 313 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 PRKCQQ04759 706 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 PTK6Q13882 451 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 ZC3H12BQ5HYM0 836 aaKnown RBP11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 ZC3H18Q86VM9 953 aaKnown RBP11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 CATSPER1Q8NEC5 780 aa11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 STN1Q9H668 368 aaKnown RBP11.65□□□□□ -0.54
PHACTR4-202ENST00000373839 IL10P22301 178 aa11.65□□□□□ -0.55
PHACTR4-202ENST00000373839 ELAVL2Q12926 359 aaKnown RBP11.65□□□□□ -0.55
PHACTR4-202ENST00000373839 DAGLBQ8NCG7 672 aa11.65□□□□□ -0.55
PHACTR4-202ENST00000373839 IGDCC4Q8TDY8 1250 aa11.65□□□□□ -0.55
PHACTR4-202ENST00000373839 RUBCNLQ9H714 662 aa11.65□□□□□ -0.55
PHACTR4-202ENST00000373839 GIMAP4Q9NUV9 329 aa11.65□□□□□ -0.55
PHACTR4-202ENST00000373839 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.65□□□□□ -0.553e-10■■□□□ 11.7
PHACTR4-202ENST00000373839 C5orf58C9J3I9 102 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 ACOT2P49753 483 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 NAPEPLDQ6IQ20 393 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 CLCA2Q9UQC9 943 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 HNRNPRO43390 633 aaKnown RBP11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 SRGNP10124 158 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 SLC11A2P49281 568 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 AMPD2Q01433 879 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 CACNB2Q08289 660 aaPredicted RBP11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 CHSY1Q86X52 802 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 PIP4K2CQ8TBX8 421 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 FRMD8P1Q9BZ68 369 aaPredicted RBP11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 DSEQ9UL01 958 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 POLRMTO00411 1230 aaKnown RBP11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 HLA-DRAP01903 254 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 CYP11B2P19099 503 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 SPRP35270 261 aaPredicted RBP11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 MTA1Q13330 715 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 BOLA3Q53S33 107 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 C1orf146Q5VVC0 180 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 ANO5Q75V66 913 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 LINC00523Q86TU6 105 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms