RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 PDZD7Q9H5P4 517 aa20.94■□□□□ 0.94
HDAC1-201ENST00000373548 VIPAS39Q9H9C1 493 aa20.94■□□□□ 0.94
HDAC1-201ENST00000373548 EPB41L5Q9HCM4 733 aa20.94■□□□□ 0.94
HDAC1-201ENST00000373548 SLC5A4Q9NY91 659 aa20.94■□□□□ 0.94
HDAC1-201ENST00000373548 TNFAIP2Q03169 654 aa20.93■□□□□ 0.94
HDAC1-201ENST00000373548 ZNF211Q13398 564 aaPredicted RBP20.93■□□□□ 0.94
HDAC1-201ENST00000373548 TRPC3Q13507 836 aa20.93■□□□□ 0.94
HDAC1-201ENST00000373548 PRAMEF19Q5SWL8 479 aa20.93■□□□□ 0.94
HDAC1-201ENST00000373548 TRIM72Q6ZMU5 477 aa20.93■□□□□ 0.94
HDAC1-201ENST00000373548 CPB2Q96IY4 423 aa20.93■□□□□ 0.94
HDAC1-201ENST00000373548 DDX47Q9H0S4 455 aaKnown RBP20.93■□□□□ 0.94
HDAC1-201ENST00000373548 XYLT2Q9H1B5 865 aa20.93■□□□□ 0.94
HDAC1-201ENST00000373548 AVENQ9NQS1 362 aaPredicted RBP20.93■□□□□ 0.94
HDAC1-201ENST00000373548 ESYT3A0FGR9 886 aa20.93■□□□□ 0.94
HDAC1-201ENST00000373548 MEFVO15553 781 aaPredicted RBP20.93■□□□□ 0.94
HDAC1-201ENST00000373548 IL18RAPO95256 599 aa20.93■□□□□ 0.94
HDAC1-201ENST00000373548 TNNC2P02585 160 aa20.93■□□□□ 0.94
HDAC1-201ENST00000373548 MCF2P10911 925 aa20.93■□□□□ 0.94
HDAC1-201ENST00000373548 NSFP46459 744 aaKnown RBP20.93■□□□□ 0.94
HDAC1-201ENST00000373548 NOMO3P69849 1222 aa20.93■□□□□ 0.94
HDAC1-201ENST00000373548 MAP2K5Q13163 448 aa20.93■□□□□ 0.94
HDAC1-201ENST00000373548 MON1BQ7L1V2 547 aa20.93■□□□□ 0.94
HDAC1-201ENST00000373548 UBL4BQ8N7F7 174 aa20.93■□□□□ 0.94
HDAC1-201ENST00000373548 ANKRD36BP1Q96IX9 119 aa20.93■□□□□ 0.94
HDAC1-201ENST00000373548 WNT8AQ9H1J5 351 aa20.93■□□□□ 0.94
HDAC1-201ENST00000373548 HPCAL4Q9UM19 191 aa20.93■□□□□ 0.94
HDAC1-201ENST00000373548 A0A0U1RQG5 324 aaPredicted RBP20.92■□□□□ 0.94
HDAC1-201ENST00000373548 SART1O43290 800 aaKnown RBP20.92■□□□□ 0.94
HDAC1-201ENST00000373548 THAP12O43422 761 aa20.92■□□□□ 0.94
HDAC1-201ENST00000373548 ZEB2O60315 1214 aa20.92■□□□□ 0.94
HDAC1-201ENST00000373548 STAG3L1P0CL83 205 aa20.92■□□□□ 0.94
HDAC1-201ENST00000373548 ARF4P18085 180 aaPredicted RBP20.92■□□□□ 0.94
HDAC1-201ENST00000373548 RRM1P23921 792 aa20.92■□□□□ 0.94
HDAC1-201ENST00000373548 SSTR3P32745 418 aaPredicted RBP20.92■□□□□ 0.94
HDAC1-201ENST00000373548 CARSP49589 748 aaKnown RBP20.92■□□□□ 0.94
HDAC1-201ENST00000373548 PEX5P50542 639 aa20.92■□□□□ 0.94
HDAC1-201ENST00000373548 EPHB4P54760 987 aa20.92■□□□□ 0.94
HDAC1-201ENST00000373548 PASD1Q8IV76 773 aa20.92■□□□□ 0.94
HDAC1-201ENST00000373548 KIAA0319LQ8IZA0 1049 aa20.92■□□□□ 0.94
HDAC1-201ENST00000373548 NLRP7Q8WX94 980 aa20.92■□□□□ 0.94
HDAC1-201ENST00000373548 ZBTB9Q96C00 473 aa20.92■□□□□ 0.94
HDAC1-201ENST00000373548 TRIM11Q96F44 468 aa20.92■□□□□ 0.94
HDAC1-201ENST00000373548 NR2E1Q9Y466 385 aa20.92■□□□□ 0.94
HDAC1-201ENST00000373548 MYBL1P10243 752 aa20.92■□□□□ 0.94
HDAC1-201ENST00000373548 ZNF157P51786 506 aaPredicted RBP20.92■□□□□ 0.94
HDAC1-201ENST00000373548 ZNF699Q32M78 642 aa20.92■□□□□ 0.94
HDAC1-201ENST00000373548 SND1Q7KZF4 910 aaKnown RBP eCLIP20.92■□□□□ 0.94
HDAC1-201ENST00000373548 UBE2Q2Q8WVN8 375 aa20.92■□□□□ 0.94
HDAC1-201ENST00000373548 CASKIN2Q8WXE0 1202 aa20.92■□□□□ 0.94
HDAC1-201ENST00000373548 FLRT1Q9NZU1 646 aa20.92■□□□□ 0.94
HDAC1-201ENST00000373548 DYNC1LI2O43237 492 aaPredicted RBP20.91■□□□□ 0.94
HDAC1-201ENST00000373548 NFICP08651 508 aa20.91■□□□□ 0.94
HDAC1-201ENST00000373548 CD58P19256 250 aa20.91■□□□□ 0.94
HDAC1-201ENST00000373548 GABPB1Q06547 395 aaPredicted RBP20.91■□□□□ 0.94
HDAC1-201ENST00000373548 TAF1CQ15572 869 aaPredicted RBP20.91■□□□□ 0.94
HDAC1-201ENST00000373548 C2CD6Q53TS8 623 aa20.91■□□□□ 0.94
HDAC1-201ENST00000373548 AADACL2Q6P093 401 aa20.91■□□□□ 0.94
HDAC1-201ENST00000373548 LLGL2Q6P1M3 1020 aa20.91■□□□□ 0.94
HDAC1-201ENST00000373548 CISHQ9NSE2 258 aa20.91■□□□□ 0.94
HDAC1-201ENST00000373548 SETD4Q9NVD3 440 aa20.91■□□□□ 0.94
HDAC1-201ENST00000373548 GNEQ9Y223 722 aaKnown RBP20.91■□□□□ 0.94
HDAC1-201ENST00000373548 MROH7Q68CQ1 1323 aa20.91■□□□□ 0.94
HDAC1-201ENST00000373548 LACTBL1A8MY62 500 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 SPOPO43791 374 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 CTNNA1P35221 906 aaKnown RBP20.9■□□□□ 0.94
HDAC1-201ENST00000373548 ASPAP45381 313 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 GPS2Q13227 327 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 EMBQ6PCB8 327 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 ZNF606Q8WXB4 792 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 SLITRK6Q9H5Y7 841 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 ZCCHC17Q9NP64 241 aaKnown RBP20.9■□□□□ 0.94
HDAC1-201ENST00000373548 PRDM10Q9NQV6 1147 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 SIX4Q9UIU6 781 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 ANAPC7Q9UJX3 599 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 MANSC4A6NHS7 340 aaPredicted RBP20.9■□□□□ 0.94
HDAC1-201ENST00000373548 A6NJR5 290 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 POLR3GO15318 223 aaPredicted RBP20.9■□□□□ 0.94
HDAC1-201ENST00000373548 TSPAN1O60635 241 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 CTNNA2P26232 953 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 TRADDQ15628 312 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 PHLDB2Q86SQ0 1253 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 SCLT1Q96NL6 688 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 NAP1L3Q99457 506 aaPredicted RBP20.9■□□□□ 0.94
HDAC1-201ENST00000373548 C11orf70Q9BRQ4 267 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 TRIM7Q9C029 511 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 ACBD3Q9H3P7 528 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 NFU1Q9UMS0 254 aa20.9■□□□□ 0.94
HDAC1-201ENST00000373548 CCDC66A2RUB6 948 aa20.89■□□□□ 0.94
HDAC1-201ENST00000373548 BHMG1C9JSJ3 638 aaPredicted RBP20.89■□□□□ 0.94
HDAC1-201ENST00000373548 WEE2P0C1S8 567 aa20.89■□□□□ 0.94
HDAC1-201ENST00000373548 PAK2Q13177 524 aa20.89■□□□□ 0.94
HDAC1-201ENST00000373548 JADE1Q6IE81 842 aa20.89■□□□□ 0.94
HDAC1-201ENST00000373548 SCARA5Q6ZMJ2 495 aa20.89■□□□□ 0.94
HDAC1-201ENST00000373548 PHF13Q86YI8 300 aaPredicted RBP20.89■□□□□ 0.94
HDAC1-201ENST00000373548 TMEM130Q8N3G9 435 aa20.89■□□□□ 0.94
HDAC1-201ENST00000373548 C1orf127Q8N9H9 656 aa20.89■□□□□ 0.94
HDAC1-201ENST00000373548 IFT81Q8WYA0 676 aa20.89■□□□□ 0.94
HDAC1-201ENST00000373548 CAVIN3Q969G5 261 aa20.89■□□□□ 0.94
HDAC1-201ENST00000373548 AMACRQ9UHK6 382 aa20.89■□□□□ 0.94
HDAC1-201ENST00000373548 PCDHA3Q9Y5H8 950 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms