RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 BRD9Q9H8M2 597 aa14.32□□□□□ -0.12
TRAPPC3-201ENST00000373159 KMT5AQ9NQR1 393 aa14.32□□□□□ -0.12
TRAPPC3-201ENST00000373159 AFF4Q9UHB7 1163 aaKnown RBP14.32□□□□□ -0.12
TRAPPC3-201ENST00000373159 KCNG1Q9UIX4 513 aa14.32□□□□□ -0.12
TRAPPC3-201ENST00000373159 LIMCH1Q9UPQ0 1083 aa14.32□□□□□ -0.12
TRAPPC3-201ENST00000373159 NUB1Q9Y5A7 615 aa14.32□□□□□ -0.12
TRAPPC3-201ENST00000373159 INSL5Q9Y5Q6 135 aa14.32□□□□□ -0.12
TRAPPC3-201ENST00000373159 CACNA1BQ00975 2339 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 COL4A3Q01955 1670 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 PRR5-ARHGAP8B1AHC4 643 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 E9PMD0 336 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 MEFVO15553 781 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 HIP1RO75146 1068 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 PSMC3P17980 439 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 ARHGAP8P85298 464 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 GRM2Q14416 872 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 CTXN3Q4LDR2 81 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 IQCEQ6IPM2 695 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 RINT1Q6NUQ1 792 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 TSSK4Q6SA08 328 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 MPZL3Q6UWV2 235 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 C1orf186Q6ZWK4 172 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 ELMOD1Q8N336 334 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 LEMD2Q8NC56 503 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 APPL2Q8NEU8 664 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 SNX29Q8TEQ0 813 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 SMARCD2Q92925 531 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 C18orf25Q96B23 403 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 DRC1Q96MC2 740 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 ZNF512Q96ME7 567 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 ZSWIM3Q96MP5 696 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 IER2Q9BTL4 223 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 RAB34Q9BZG1 259 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 CHRDQ9H2X0 955 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 TRPV4Q9HBA0 871 aa14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 ZNF334Q9HCZ1 680 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 NOL7Q9UMY1 257 aaKnown RBP14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 SMG5Q9UPR3 1016 aaKnown RBP14.31□□□□□ -0.12
TRAPPC3-201ENST00000373159 NRG2O14511 850 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 MOSPD3O75425 235 aa14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 TDGF1P13385 188 aa14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 TGM1P22735 817 aa14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 U2AF2P26368 475 aaKnown RBP eCLIP14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 EPHA5P54756 1037 aa14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 NRLP54845 237 aa14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 MAPK7Q13164 816 aa14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 PTGDRQ13258 359 aa14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 GNL2Q13823 731 aaKnown RBP14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 SLC10A6Q3KNW5 377 aa14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 KRT79Q5XKE5 535 aa14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 ZNF280DQ6N043 979 aa14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 CCDC83Q8IWF9 413 aa14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 DEPDC1BQ8WUY9 529 aa14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 SPIRE2Q8WWL2 714 aa14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 GPR88Q9GZN0 384 aa14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 CEP72Q9P209 647 aa14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 MIA3Q5JRA6 1907 aa14.3□□□□□ -0.12
TRAPPC3-201ENST00000373159 TRIP11Q15643 1979 aa14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 LAD1O00515 517 aa14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 TOM1L1O75674 476 aa14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 OAZ2O95190 189 aa14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 MARCKSP29966 332 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 TOB1P50616 345 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 ATXN1P54253 815 aaKnown RBP14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 MLLT6P55198 1093 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 HMGN5P82970 282 aaKnown RBP14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 LMNB2Q03252 620 aa14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 TWF1Q12792 350 aa14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 NBR1Q14596 966 aa14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 VITQ6UXI7 678 aa14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 MFSD6LQ8IWD5 586 aa14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 HS6ST3Q8IZP7 471 aa14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 BEST2Q8NFU1 509 aa14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 FAM3CQ92520 227 aa14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 DDX12PQ92771 950 aa14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 ZBTB45Q96K62 511 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 TBC1D32Q96NH3 1257 aa14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 RUSC1Q9BVN2 902 aa14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 TIPINQ9BVW5 301 aa14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 OXCT2Q9BYC2 517 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 LMAN1LQ9HAT1 526 aa14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 NDRG2Q9UN36 371 aaKnown RBP14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 PCDHB8Q9UN66 801 aa14.29□□□□□ -0.12
TRAPPC3-201ENST00000373159 SFI1A8K8P3 1242 aa14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 M0QZQ0 153 aa14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 ZNF263O14978 683 aa14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 SLC16A4O15374 487 aa14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 GUCY2CP25092 1073 aa14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 GDI1P31150 447 aa14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 MCM4P33991 863 aa14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 VIPR2P41587 438 aa14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 STRN3Q13033 797 aa14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 PPP2R5DQ14738 602 aa14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 RNF19BQ6ZMZ0 732 aa14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 KCTD17Q8N5Z5 321 aa14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 CELF5Q8N6W0 485 aaKnown RBP14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 E2F7Q96AV8 911 aa14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 ZSCAN31Q96LW9 406 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 PLEKHA5Q9HAU0 1116 aa14.28□□□□□ -0.12
TRAPPC3-201ENST00000373159 ASAH2Q9NR71 780 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms